RNA–Protein interactions for RNA: ENST00000374274.7

SNX12-202, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX12, Length 2,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-202ENST00000374274 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
SNX12-202ENST00000374274 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
SNX12-202ENST00000374274 HRCP23327 699 aa22.65■■□□□ 1.22
SNX12-202ENST00000374274 ZCCHC6Q5VYS8 1495 aaKnown RBP22.55■■□□□ 1.2
SNX12-202ENST00000374274 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
SNX12-202ENST00000374274 PELP1Q8IZL8 1130 aaKnown RBP22.13■■□□□ 1.13
SNX12-202ENST00000374274 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
SNX12-202ENST00000374274 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
SNX12-202ENST00000374274 MYO15BQ96JP2 1530 aa22.05■■□□□ 1.12
SNX12-202ENST00000374274 SUPT5HO00267 1087 aaKnown RBP22.03■■□□□ 1.12
SNX12-202ENST00000374274 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
SNX12-202ENST00000374274 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
SNX12-202ENST00000374274 PPARGC1BQ86YN6 1023 aaKnown RBP21.81■■□□□ 1.08
SNX12-202ENST00000374274 ABCC9O60706 1549 aa21.59■■□□□ 1.05
SNX12-202ENST00000374274 ZEB1P37275 1124 aaPredicted RBP21.53■■□□□ 1.04
SNX12-202ENST00000374274 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.04
SNX12-202ENST00000374274 NACADO15069 1562 aa21.45■■□□□ 1.02
SNX12-202ENST00000374274 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
SNX12-202ENST00000374274 MYT1Q01538 1121 aa21.38■■□□□ 1.01
SNX12-202ENST00000374274 SCAF1Q9H7N4 1312 aaKnown RBP21.27■■□□□ 1
SNX12-202ENST00000374274 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
SNX12-202ENST00000374274 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
SNX12-202ENST00000374274 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
SNX12-202ENST00000374274 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.93
SNX12-202ENST00000374274 UNC13AQ9UPW8 1703 aa20.83■□□□□ 0.92
SNX12-202ENST00000374274 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
SNX12-202ENST00000374274 MROH2BQ7Z745 1585 aa20.71■□□□□ 0.91
SNX12-202ENST00000374274 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
SNX12-202ENST00000374274 NEUROD1Q13562 356 aa20.68■□□□□ 0.9
SNX12-202ENST00000374274 BAZ1AQ9NRL2 1556 aaPredicted RBP20.63■□□□□ 0.89
SNX12-202ENST00000374274 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
SNX12-202ENST00000374274 GTF3C3Q9Y5Q9 886 aa20.58■□□□□ 0.88
SNX12-202ENST00000374274 WIZO95785 1651 aa20.58■□□□□ 0.88
SNX12-202ENST00000374274 BICRAQ9NZM4 1560 aa20.56■□□□□ 0.88
SNX12-202ENST00000374274 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
SNX12-202ENST00000374274 DIEXFQ68CQ4 756 aaKnown RBP20.48■□□□□ 0.87
SNX12-202ENST00000374274 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNX12-202ENST00000374274 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
SNX12-202ENST00000374274 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
SNX12-202ENST00000374274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.32■□□□□ 0.84
SNX12-202ENST00000374274 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
SNX12-202ENST00000374274 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
SNX12-202ENST00000374274 PEG3Q9GZU2 1588 aa20.2■□□□□ 0.82
SNX12-202ENST00000374274 ZNF316A6NFI3 1004 aaPredicted RBP20.17■□□□□ 0.82
SNX12-202ENST00000374274 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
SNX12-202ENST00000374274 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
SNX12-202ENST00000374274 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
SNX12-202ENST00000374274 TTBK1Q5TCY1 1321 aaPredicted RBP20.13■□□□□ 0.81
SNX12-202ENST00000374274 CLSPNQ9HAW4 1339 aa20.09■□□□□ 0.81
SNX12-202ENST00000374274 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
SNX12-202ENST00000374274 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
SNX12-202ENST00000374274 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
SNX12-202ENST00000374274 CEP162Q5TB80 1403 aa19.91■□□□□ 0.78
SNX12-202ENST00000374274 TNIKQ9UKE5 1360 aa19.89■□□□□ 0.77
SNX12-202ENST00000374274 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
SNX12-202ENST00000374274 MIER1Q8N108 512 aa19.87■□□□□ 0.77
SNX12-202ENST00000374274 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
SNX12-202ENST00000374274 EEA1Q15075 1411 aa19.83■□□□□ 0.77
SNX12-202ENST00000374274 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
SNX12-202ENST00000374274 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
SNX12-202ENST00000374274 ANP32EQ9BTT0 268 aa19.71■□□□□ 0.75
SNX12-202ENST00000374274 SUPT16HQ9Y5B9 1047 aaKnown RBP19.69■□□□□ 0.74
SNX12-202ENST00000374274 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
SNX12-202ENST00000374274 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
SNX12-202ENST00000374274 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
SNX12-202ENST00000374274 TSHZ2Q9NRE2 1034 aa19.58■□□□□ 0.73
SNX12-202ENST00000374274 SOGA1O94964 1423 aa19.58■□□□□ 0.72
SNX12-202ENST00000374274 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
SNX12-202ENST00000374274 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
SNX12-202ENST00000374274 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
SNX12-202ENST00000374274 KIF21BO75037 1637 aa19.5■□□□□ 0.71
SNX12-202ENST00000374274 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
SNX12-202ENST00000374274 CFTRP13569 1480 aa19.48■□□□□ 0.71
SNX12-202ENST00000374274 TOP2BQ02880 1626 aa19.47■□□□□ 0.71
SNX12-202ENST00000374274 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
SNX12-202ENST00000374274 VPS8Q8N3P4 1428 aa19.45■□□□□ 0.7
SNX12-202ENST00000374274 UBTFP17480 764 aaKnown RBP19.45■□□□□ 0.7
SNX12-202ENST00000374274 BIVM-ERCC5R4GMW8 1640 aa19.44■□□□□ 0.7
SNX12-202ENST00000374274 HNRNPUL2Q1KMD3 747 aaKnown RBP19.43■□□□□ 0.7
SNX12-202ENST00000374274 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
SNX12-202ENST00000374274 CLIP1P30622 1438 aa19.38■□□□□ 0.69
SNX12-202ENST00000374274 DHX57Q6P158 1386 aaKnown RBP19.36■□□□□ 0.69
SNX12-202ENST00000374274 CADPSQ9ULU8 1353 aa19.33■□□□□ 0.69
SNX12-202ENST00000374274 CUX1P39880 1505 aa19.33■□□□□ 0.69
SNX12-202ENST00000374274 APLP2Q06481 763 aa19.28■□□□□ 0.68
SNX12-202ENST00000374274 CUX2O14529 1486 aa19.26■□□□□ 0.67
SNX12-202ENST00000374274 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
SNX12-202ENST00000374274 RRBP1Q9P2E9 1410 aaKnown RBP19.15■□□□□ 0.66
SNX12-202ENST00000374274 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
SNX12-202ENST00000374274 KIF27Q86VH2 1401 aa19.14■□□□□ 0.65
SNX12-202ENST00000374274 RBM19Q9Y4C8 960 aaKnown RBP19.12■□□□□ 0.65
SNX12-202ENST00000374274 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
SNX12-202ENST00000374274 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
SNX12-202ENST00000374274 NESP48681 1621 aa19.08■□□□□ 0.65
SNX12-202ENST00000374274 FKBP8Q14318 412 aa19.07■□□□□ 0.64
SNX12-202ENST00000374274 LAMC3Q9Y6N6 1575 aa19.07■□□□□ 0.64
SNX12-202ENST00000374274 NEFLP07196 543 aa19.07■□□□□ 0.64
SNX12-202ENST00000374274 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
SNX12-202ENST00000374274 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
SNX12-202ENST00000374274 MYT1LQ9UL68 1186 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms