RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ERBB4Q15303 1308 aa14.23□□□□□ -0.13
TRUB1-201ENST00000298746 GAS2L3Q86XJ1 694 aa14.23□□□□□ -0.13
TRUB1-201ENST00000298746 R3HCC1Q9Y3T6 440 aaKnown RBP14.23□□□□□ -0.13
TRUB1-201ENST00000298746 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
TRUB1-201ENST00000298746 CALD1Q05682 793 aaKnown RBP14.22□□□□□ -0.13
TRUB1-201ENST00000298746 WDR63Q8IWG1 891 aa14.22□□□□□ -0.13
TRUB1-201ENST00000298746 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
TRUB1-201ENST00000298746 TPM2P07951 284 aa14.22□□□□□ -0.13
TRUB1-201ENST00000298746 TPRNQ4KMQ1 711 aa14.22□□□□□ -0.13
TRUB1-201ENST00000298746 PLA2R1Q13018 1463 aa14.22□□□□□ -0.13
TRUB1-201ENST00000298746 ISY1Q9ULR0 285 aaKnown RBP14.21□□□□□ -0.13
TRUB1-201ENST00000298746 NOB1Q9ULX3 412 aaKnown RBP14.21□□□□□ -0.13
TRUB1-201ENST00000298746 PTPRGP23470 1445 aa14.21□□□□□ -0.13
TRUB1-201ENST00000298746 TRIM27P14373 513 aa14.21□□□□□ -0.13
TRUB1-201ENST00000298746 ATP10BO94823 1461 aa14.21□□□□□ -0.14
TRUB1-201ENST00000298746 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.14
TRUB1-201ENST00000298746 MCTP1Q6DN14 999 aa14.21□□□□□ -0.14
TRUB1-201ENST00000298746 KIF3BO15066 747 aa14.2□□□□□ -0.14
TRUB1-201ENST00000298746 PTMAP06454 111 aaKnown RBP14.2□□□□□ -0.14
TRUB1-201ENST00000298746 FOXD4L5Q5VV16 416 aaPredicted RBP14.2□□□□□ -0.14
TRUB1-201ENST00000298746 FOXD4L4Q8WXT5 416 aaPredicted RBP14.2□□□□□ -0.14
TRUB1-201ENST00000298746 SSFA2P28290 1259 aa14.2□□□□□ -0.14
TRUB1-201ENST00000298746 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
TRUB1-201ENST00000298746 SSH1Q8WYL5 1049 aa14.2□□□□□ -0.14
TRUB1-201ENST00000298746 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
TRUB1-201ENST00000298746 ELL2O00472 640 aaPredicted RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 PTMSP20962 102 aa14.19□□□□□ -0.14
TRUB1-201ENST00000298746 CAVIN1Q6NZI2 390 aaKnown RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 ATF7IPQ6VMQ6 1270 aa14.19□□□□□ -0.14
TRUB1-201ENST00000298746 C1orf115Q9H7X2 142 aa14.19□□□□□ -0.14
TRUB1-201ENST00000298746 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 SCAF11Q99590 1463 aaKnown RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 APBB1O00213 710 aa14.19□□□□□ -0.14
TRUB1-201ENST00000298746 CCDC173Q0VFZ6 552 aa14.19□□□□□ -0.14
TRUB1-201ENST00000298746 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 EIF4G3O43432 1585 aaKnown RBP14.19□□□□□ -0.14
TRUB1-201ENST00000298746 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
TRUB1-201ENST00000298746 EFCAB2Q5VUJ9 269 aa14.18□□□□□ -0.14
TRUB1-201ENST00000298746 ZSCAN30Q86W11 494 aa14.18□□□□□ -0.14
TRUB1-201ENST00000298746 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
TRUB1-201ENST00000298746 NUP160Q12769 1436 aa14.17□□□□□ -0.14
TRUB1-201ENST00000298746 TMEM132EQ6IEE7 984 aa14.17□□□□□ -0.14
TRUB1-201ENST00000298746 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
TRUB1-201ENST00000298746 AFAP1Q8N556 730 aa14.17□□□□□ -0.14
TRUB1-201ENST00000298746 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
TRUB1-201ENST00000298746 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.16□□□□□ -0.14
TRUB1-201ENST00000298746 CHD1LQ86WJ1 897 aa14.16□□□□□ -0.14
TRUB1-201ENST00000298746 CIZ1Q9ULV3 898 aaPredicted RBP14.16□□□□□ -0.14
TRUB1-201ENST00000298746 PDCL3Q9H2J4 239 aa14.16□□□□□ -0.14
TRUB1-201ENST00000298746 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
TRUB1-201ENST00000298746 RIPK4P57078 832 aa14.15□□□□□ -0.14
TRUB1-201ENST00000298746 SYNJ2O15056 1496 aa14.15□□□□□ -0.14
TRUB1-201ENST00000298746 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
TRUB1-201ENST00000298746 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
TRUB1-201ENST00000298746 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.14
TRUB1-201ENST00000298746 IFT140Q96RY7 1462 aa14.15□□□□□ -0.14
TRUB1-201ENST00000298746 NLRP1Q9C000 1473 aa14.14□□□□□ -0.15
TRUB1-201ENST00000298746 XPCQ01831 940 aaPredicted RBP14.13□□□□□ -0.15
TRUB1-201ENST00000298746 RAB3GAP1Q15042 981 aa14.13□□□□□ -0.15
TRUB1-201ENST00000298746 SYCP2Q9BX26 1530 aa14.13□□□□□ -0.15
TRUB1-201ENST00000298746 KANK1Q14678 1352 aa14.13□□□□□ -0.15
TRUB1-201ENST00000298746 ABCC10Q5T3U5 1492 aa14.13□□□□□ -0.15
TRUB1-201ENST00000298746 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
TRUB1-201ENST00000298746 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
TRUB1-201ENST00000298746 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
TRUB1-201ENST00000298746 POLR3AO14802 1390 aaPredicted RBP14.13□□□□□ -0.15
TRUB1-201ENST00000298746 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 GGNBP2Q9H3C7 697 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 NPC1L1Q9UHC9 1359 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 ABCC2Q92887 1545 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 FOXD4L6Q3SYB3 417 aaPredicted RBP14.12□□□□□ -0.15
TRUB1-201ENST00000298746 FOXD4L3Q6VB84 417 aaPredicted RBP14.12□□□□□ -0.15
TRUB1-201ENST00000298746 GAS2L2Q8NHY3 880 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 SCAPERQ9BY12 1400 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
TRUB1-201ENST00000298746 STAC3Q96MF2 364 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 STK26Q9P289 416 aa14.12□□□□□ -0.15
TRUB1-201ENST00000298746 CDC42BPAQ5VT25 1732 aa14.11□□□□□ -0.15
TRUB1-201ENST00000298746 CD2BP2O95400 341 aaKnown RBP14.11□□□□□ -0.15
TRUB1-201ENST00000298746 BAG4O95429 457 aaKnown RBP14.11□□□□□ -0.15
TRUB1-201ENST00000298746 MPNDQ8N594 471 aa14.11□□□□□ -0.15
TRUB1-201ENST00000298746 SNX21Q969T3 373 aa14.11□□□□□ -0.15
TRUB1-201ENST00000298746 KIF16BQ96L93 1317 aa14.11□□□□□ -0.15
TRUB1-201ENST00000298746 ADCY10Q96PN6 1610 aa14.1□□□□□ -0.15
TRUB1-201ENST00000298746 TBC1D9Q6ZT07 1266 aa14.1□□□□□ -0.15
TRUB1-201ENST00000298746 TMPOP42166 694 aaKnown RBP14.1□□□□□ -0.15
TRUB1-201ENST00000298746 NOL8Q76FK4 1167 aaKnown RBP14.1□□□□□ -0.15
TRUB1-201ENST00000298746 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 UQCRHLA0A096LP55 91 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 UQCRHP07919 91 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 RBM25P49756 843 aaKnown RBP14.09□□□□□ -0.15
TRUB1-201ENST00000298746 PLCB2Q00722 1185 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 NUCB1Q02818 461 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
TRUB1-201ENST00000298746 CABP2Q9NPB3 220 aa14.09□□□□□ -0.15
TRUB1-201ENST00000298746 KLHL40Q2TBA0 621 aa14.08□□□□□ -0.16
TRUB1-201ENST00000298746 OFD1O75665 1012 aa14.08□□□□□ -0.16
TRUB1-201ENST00000298746 NUCB2P80303 420 aa14.08□□□□□ -0.16
TRUB1-201ENST00000298746 CDC45O75419 566 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms