RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
SCG3-201ENST00000220478 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
SCG3-201ENST00000220478 SYNMO15061 1565 aa10.09□□□□□ -0.79
SCG3-201ENST00000220478 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
SCG3-201ENST00000220478 LMOD2Q6P5Q4 547 aa10.09□□□□□ -0.79
SCG3-201ENST00000220478 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.09□□□□□ -0.79
SCG3-201ENST00000220478 CCDC144AA2RUR9 1427 aa10.08□□□□□ -0.8
SCG3-201ENST00000220478 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
SCG3-201ENST00000220478 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
SCG3-201ENST00000220478 CEP152O94986 1710 aa10.08□□□□□ -0.8
SCG3-201ENST00000220478 BECN1Q14457 450 aa10.07□□□□□ -0.8
SCG3-201ENST00000220478 PIK3C2GO75747 1445 aa10.07□□□□□ -0.8
SCG3-201ENST00000220478 MAPK8IP3Q9UPT6 1336 aa10.07□□□□□ -0.8
SCG3-201ENST00000220478 RSPH4AQ5TD94 716 aa10.07□□□□□ -0.8
SCG3-201ENST00000220478 PCDHB15Q9Y5E8 787 aa10.07□□□□□ -0.8
SCG3-201ENST00000220478 EIF2AK4Q9P2K8 1649 aaKnown RBP10.06□□□□□ -0.8
SCG3-201ENST00000220478 NUP155O75694 1391 aa10.06□□□□□ -0.8
SCG3-201ENST00000220478 TROQ12816 1431 aaPredicted RBP10.06□□□□□ -0.8
SCG3-201ENST00000220478 TPM2P07951 284 aa10.06□□□□□ -0.8
SCG3-201ENST00000220478 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
SCG3-201ENST00000220478 UNC13BO14795 1591 aa10.06□□□□□ -0.8
SCG3-201ENST00000220478 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 RNF216Q9NWF9 866 aaPredicted RBP10.05□□□□□ -0.8
SCG3-201ENST00000220478 TNNQ9UQP3 1299 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 CERS3Q8IU89 383 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 RLBP1P12271 317 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 MADDQ8WXG6 1647 aa10.05□□□□□ -0.8
SCG3-201ENST00000220478 ANKRD30AQ9BXX3 1397 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
SCG3-201ENST00000220478 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
SCG3-201ENST00000220478 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 TMED8Q6PL24 325 aaPredicted RBP10.04□□□□□ -0.8
SCG3-201ENST00000220478 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
SCG3-201ENST00000220478 C9orf84Q5VXU9 1444 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 TICAM2Q86XR7 235 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
SCG3-201ENST00000220478 ATF5Q9Y2D1 282 aaPredicted RBP10.04□□□□□ -0.8
SCG3-201ENST00000220478 ASXL1Q8IXJ9 1541 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 GRIN2AQ12879 1464 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 IQSEC2Q5JU85 1478 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 ARHGAP31Q2M1Z3 1444 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 SCAPERQ9BY12 1400 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 MYH16Q9H6N6 1097 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 RBM10P98175 930 aaKnown RBP10.03□□□□□ -0.8
SCG3-201ENST00000220478 PPP1R9BQ96SB3 815 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 COG6Q9Y2V7 657 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 CGNL1Q0VF96 1302 aa10.03□□□□□ -0.8
SCG3-201ENST00000220478 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.8
SCG3-201ENST00000220478 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.02□□□□□ -0.8
SCG3-201ENST00000220478 PSMD1Q99460 953 aa10.02□□□□□ -0.8
SCG3-201ENST00000220478 ARHGEF5Q12774 1597 aa10.02□□□□□ -0.81
SCG3-201ENST00000220478 CHMP5Q9NZZ3 219 aa10.02□□□□□ -0.81
SCG3-201ENST00000220478 PDZRN3Q9UPQ7 1066 aa10.02□□□□□ -0.81
SCG3-201ENST00000220478 OFD1O75665 1012 aa10.02□□□□□ -0.81
SCG3-201ENST00000220478 AAMPQ13685 434 aa10.02□□□□□ -0.81
SCG3-201ENST00000220478 IQGAP3Q86VI3 1631 aa10.01□□□□□ -0.81
SCG3-201ENST00000220478 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
SCG3-201ENST00000220478 CCDC82Q8N4S0 544 aa10.01□□□□□ -0.81
SCG3-201ENST00000220478 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
SCG3-201ENST00000220478 SLC24A3Q9HC58 644 aa10.01□□□□□ -0.81
SCG3-201ENST00000220478 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
SCG3-201ENST00000220478 APAF1O14727 1248 aa10□□□□□ -0.81
SCG3-201ENST00000220478 TNPO1Q92973 898 aaKnown RBP10□□□□□ -0.81
SCG3-201ENST00000220478 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
SCG3-201ENST00000220478 NUP160Q12769 1436 aa9.99□□□□□ -0.81
SCG3-201ENST00000220478 KIF2CQ99661 725 aa9.99□□□□□ -0.81
SCG3-201ENST00000220478 E9PSI1 815 aa9.99□□□□□ -0.81
SCG3-201ENST00000220478 CFDP1Q9UEE9 299 aaPredicted RBP9.99□□□□□ -0.81
SCG3-201ENST00000220478 PLB1Q6P1J6 1458 aa9.99□□□□□ -0.81
SCG3-201ENST00000220478 ABCA8O94911 1581 aa9.99□□□□□ -0.81
SCG3-201ENST00000220478 NPC1L1Q9UHC9 1359 aa9.98□□□□□ -0.81
SCG3-201ENST00000220478 SAMD9LQ8IVG5 1584 aa9.98□□□□□ -0.81
SCG3-201ENST00000220478 TERF1P54274 439 aa9.98□□□□□ -0.81
SCG3-201ENST00000220478 CD2BP2O95400 341 aaKnown RBP9.98□□□□□ -0.81
SCG3-201ENST00000220478 RAB3GAP1Q15042 981 aa9.98□□□□□ -0.81
SCG3-201ENST00000220478 ATP10AO60312 1499 aa9.97□□□□□ -0.81
SCG3-201ENST00000220478 CLSTN1O94985 981 aa9.97□□□□□ -0.81
SCG3-201ENST00000220478 C22orf23Q9BZE7 217 aa9.97□□□□□ -0.81
SCG3-201ENST00000220478 KDM5AP29375 1690 aaKnown RBP9.97□□□□□ -0.81
SCG3-201ENST00000220478 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
SCG3-201ENST00000220478 RARSP54136 660 aaKnown RBP9.97□□□□□ -0.81
SCG3-201ENST00000220478 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
SCG3-201ENST00000220478 ZNF526Q8TF50 670 aaPredicted RBP9.97□□□□□ -0.81
SCG3-201ENST00000220478 PDS5BQ9NTI5 1447 aa9.96□□□□□ -0.82
SCG3-201ENST00000220478 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.82
SCG3-201ENST00000220478 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCG3-201ENST00000220478 ZSCAN30Q86W11 494 aa9.96□□□□□ -0.82
SCG3-201ENST00000220478 PPRC1Q5VV67 1664 aaKnown RBP9.96□□□□□ -0.82
SCG3-201ENST00000220478 WWC1Q8IX03 1113 aa9.95□□□□□ -0.82
SCG3-201ENST00000220478 CFAP74Q9C0B2 1584 aa9.95□□□□□ -0.82
SCG3-201ENST00000220478 TMF1P82094 1093 aa9.94□□□□□ -0.82
SCG3-201ENST00000220478 CLEC17AQ6ZS10 378 aa9.94□□□□□ -0.82
SCG3-201ENST00000220478 SNX21Q969T3 373 aa9.94□□□□□ -0.82
SCG3-201ENST00000220478 PDLIM2Q96JY6 352 aa9.94□□□□□ -0.82
SCG3-201ENST00000220478 CCDC173Q0VFZ6 552 aa9.94□□□□□ -0.82
SCG3-201ENST00000220478 ZNF500O60304 480 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms