RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 D430041D05RikF6ZGR6 1678 aa22.23■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Kif24Q6NWW5 1356 aa22.23■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Plekhg1F6S200 1446 aa22.23■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Cdk5rap2Q8K389 1822 aa22.22■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 IqubQ8CDK3 788 aa22.22■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Zfp142G5E869 1843 aa22.22■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Ggt6Q6PDE7 497 aa22.21■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 DccP70211 1447 aa22.21■■□□□ 1.15
Hmgb1-208ENSMUST00000139443 Cep170bQ80U49 1574 aa22.2■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Slit2Q9R1B9 1521 aa22.18■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Adgrl1Q80TR1 1466 aa22.18■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Hspa5P20029 655 aaKnown RBP22.18■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Usp32F8VPZ3 1604 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 GnpatP98192 678 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Kcna6Q61923 529 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Farp2Q91VS8 1065 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Ybx3Q9JKB3 361 aaKnown RBP22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Wnk3Q80XP9 1757 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 PtprvP70289 1705 aa22.17■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Sipa1l2Q80TE4 1722 aa22.15■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Fnbp4Q6ZQ03 1031 aa22.15■■□□□ 1.14
Hmgb1-208ENSMUST00000139443 Sema6bO54951 886 aa22.14■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Stag3O70576 1240 aa22.14■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Neurod1Q60867 357 aa22.14■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 C5P06684 1680 aa22.14■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Cntnap1O54991 1385 aa22.12■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Nhsl1Q8CAF4 1587 aa22.12■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Atp2b2Q9R0K7 1198 aa22.11■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Sox12Q04890 314 aa22.1■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Als2Q920R0 1651 aa22.1■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Sipa1l1Q8C0T5 1782 aa22.1■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Ddx17Q501J6 650 aaKnown RBP22.09■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Znf526Q8BI66 675 aa22.09■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Usp40Q8BWR4 1235 aa22.08■■□□□ 1.13
Hmgb1-208ENSMUST00000139443 Kif1aP33173 1695 aa22.07■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Mink1Q9JM52 1308 aa22.07■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Dmrt2Q8BG36 561 aa22.07■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Abca14E9Q8F8 1683 aa22.07■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Cypt2Q6P924 180 aa22.06■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Polr3aB2RXC6 1390 aa22.06■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Tmem2Q5FWI3 1383 aa22.06■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Bcl2l12Q9D3J3 255 aa22.05■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Siglec1Q62230 1695 aa22.04■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Ap3b2Q9JME5 1082 aa22.04■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 N4bp2F8VQG7 1678 aaKnown RBP22.04■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 MypopQ8R4U1 393 aa22.03■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Marf1Q8BJ34 1730 aaKnown RBP22.03■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 Idi1P58044 227 aa22.02■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 NgefQ8CHT1 710 aa22.02■■□□□ 1.12
Hmgb1-208ENSMUST00000139443 RalgapbQ8BQZ4 1484 aa22■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Camta1A2A891 1682 aa22■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Stard8Q8K031 1019 aa21.99■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Emilin2Q8K482 1074 aa21.99■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Gtf2e1Q9D0D5 440 aa21.99■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Nphp4P59240 1425 aa21.98■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Cpsf1Q9EPU4 1441 aaKnown RBP21.98■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Lrp6O88572 1613 aa21.98■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Atp7bQ64446 1462 aa21.97■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Abcc10Q8R4P9 1501 aa21.97■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 Gm16486A0A1D5RMD1 1434 aa21.96■■□□□ 1.11
Hmgb1-208ENSMUST00000139443 CenpjQ569L8 1344 aa21.95■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Sirt1Q923E4 737 aa21.94■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 NinlQ6ZQ12 1394 aa21.94■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Fam135bQ9DAI6 1403 aa21.94■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Znf316Q6PGE4 1016 aa21.93■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Cypt1Q8CH20 168 aa21.93■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Wdr17E9Q271 1322 aa21.92■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Acin1Q9JIX8 1338 aaKnown RBP21.92■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Cdk19Q8BWD8 501 aa21.92■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Cadps2Q8BYR5 1297 aa21.92■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Atp10bB1AWN4 1474 aa21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Mug2P28666 1451 aa21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Tex14Q7M6U3 1450 aa21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Arhgef1Q61210 920 aaKnown RBP21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Smim5Q8BT42 78 aa21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Ddx54Q8K4L0 874 aaKnown RBP21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Tnrc6bQ8BKI2 1810 aaKnown RBP21.91■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Srcin1Q9QWI6 1250 aa21.9■■□□□ 1.1
Hmgb1-208ENSMUST00000139443 Acsbg1Q99PU5 721 aa21.89■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Zbtb4Q5F293 982 aa21.88■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Lrrc59Q922Q8 307 aaKnown RBP21.88■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Fyb1O35601 819 aa21.87■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Mon2Q80TL7 1715 aa21.84■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Gsto1O09131 240 aa21.84■■□□□ 1.09
Hmgb1-208ENSMUST00000139443 Zranb1Q7M760 708 aa21.82■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Dixdc1Q80Y83 711 aa21.82■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Nrxn1Q9CS84 1514 aa21.81■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Exosc9Q9JHI7 438 aaKnown RBP21.81■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 NktrP30415 1453 aa21.81■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Rundc1Q0VDN7 615 aa21.8■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 FanciQ8K368 1330 aa21.8■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Card11Q8CIS0 1159 aa21.79■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 PtpruB1AUH1 1446 aa21.79■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 InhbeO08717 350 aa21.78■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Rock2P70336 1388 aa21.77■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Abca15E9PWH4 1668 aa21.77■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 HdgfP51859 237 aaKnown RBP21.77■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 ZgpatQ8VDM1 511 aa21.77■■□□□ 1.08
Hmgb1-208ENSMUST00000139443 Idi2Q8BFZ6 227 aa21.76■■□□□ 1.07
Hmgb1-208ENSMUST00000139443 Slc35g1Q8BY79 368 aa21.76■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms