RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Sema6bO54951 886 aa17.34■□□□□ 0.37
Trim50-202ENSMUST00000111180 Kdm2aP59997 1161 aa17.34■□□□□ 0.37
Trim50-202ENSMUST00000111180 Cypt2Q6P924 180 aa17.34■□□□□ 0.37
Trim50-202ENSMUST00000111180 Cwc22Q8C5N3 908 aaKnown RBP17.34■□□□□ 0.37
Trim50-202ENSMUST00000111180 Supt5hO55201 1082 aaKnown RBP17.33■□□□□ 0.37
Trim50-202ENSMUST00000111180 Sipa1l1Q8C0T5 1782 aa17.32■□□□□ 0.36
Trim50-202ENSMUST00000111180 Gm10563F6WIE4 79 aa17.31■□□□□ 0.36
Trim50-202ENSMUST00000111180 Fnbp4Q6ZQ03 1031 aa17.31■□□□□ 0.36
Trim50-202ENSMUST00000111180 Rock2P70336 1388 aa17.31■□□□□ 0.36
Trim50-202ENSMUST00000111180 Sall2Q9QX96 1004 aa17.31■□□□□ 0.36
Trim50-202ENSMUST00000111180 Nwd1A6H603 1563 aa17.3■□□□□ 0.36
Trim50-202ENSMUST00000111180 Srpk2O54781 681 aaKnown RBP17.3■□□□□ 0.36
Trim50-202ENSMUST00000111180 Col14a1Q80X19 1797 aa17.29■□□□□ 0.36
Trim50-202ENSMUST00000111180 Dmrt2Q8BG36 561 aa17.29■□□□□ 0.36
Trim50-202ENSMUST00000111180 Fan1Q69ZT1 1020 aa17.28■□□□□ 0.36
Trim50-202ENSMUST00000111180 NalcnQ8BXR5 1738 aa17.28■□□□□ 0.36
Trim50-202ENSMUST00000111180 GnpatP98192 678 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Q3UJC8 639 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Slc52a2Q9D8F3 450 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Ybx3Q9JKB3 361 aaKnown RBP17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 MaddQ80U28 1577 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Nhsl1Q8CAF4 1587 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Ift172Q6VH22 1749 aa17.27■□□□□ 0.36
Trim50-202ENSMUST00000111180 Pola1P33609 1465 aa17.27■□□□□ 0.35
Trim50-202ENSMUST00000111180 Ddx17Q501J6 650 aaKnown RBP17.26■□□□□ 0.35
Trim50-202ENSMUST00000111180 Stard8Q8K031 1019 aa17.26■□□□□ 0.35
Trim50-202ENSMUST00000111180 Itsn2Q9Z0R6 1659 aa17.26■□□□□ 0.35
Trim50-202ENSMUST00000111180 Kif24Q6NWW5 1356 aa17.26■□□□□ 0.35
Trim50-202ENSMUST00000111180 Gm20521D3Z5F7 333 aa17.25■□□□□ 0.35
Trim50-202ENSMUST00000111180 MypopQ8R4U1 393 aa17.25■□□□□ 0.35
Trim50-202ENSMUST00000111180 Cntnap1O54991 1385 aa17.25■□□□□ 0.35
Trim50-202ENSMUST00000111180 Znf526Q8BI66 675 aa17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 KdrP35918 1367 aa17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 Nphp4P59240 1425 aa17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 Lrrc7Q80TE7 1490 aa17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 Sin3aQ60520 1274 aaKnown RBP17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 Bcl2l12Q9D3J3 255 aa17.24■□□□□ 0.35
Trim50-202ENSMUST00000111180 Zfp142G5E869 1843 aa17.23■□□□□ 0.35
Trim50-202ENSMUST00000111180 Farp2Q91VS8 1065 aa17.23■□□□□ 0.35
Trim50-202ENSMUST00000111180 Adgrl1Q80TR1 1466 aa17.22■□□□□ 0.35
Trim50-202ENSMUST00000111180 Pcgf6Q99NA9 353 aa17.22■□□□□ 0.35
Trim50-202ENSMUST00000111180 Cps1Q8C196 1500 aa17.21■□□□□ 0.35
Trim50-202ENSMUST00000111180 PtprvP70289 1705 aa17.21■□□□□ 0.34
Trim50-202ENSMUST00000111180 Puf60Q3UEB3 564 aaKnown RBP17.2■□□□□ 0.34
Trim50-202ENSMUST00000111180 C3P01027 1663 aa17.2■□□□□ 0.34
Trim50-202ENSMUST00000111180 Kcna6Q61923 529 aa17.19■□□□□ 0.34
Trim50-202ENSMUST00000111180 Srcin1Q9QWI6 1250 aa17.19■□□□□ 0.34
Trim50-202ENSMUST00000111180 Sox12Q04890 314 aa17.18■□□□□ 0.34
Trim50-202ENSMUST00000111180 Kif20bQ80WE4 1774 aaKnown RBP17.18■□□□□ 0.34
Trim50-202ENSMUST00000111180 Rreb1Q3UH06 1700 aaKnown RBP17.17■□□□□ 0.34
Trim50-202ENSMUST00000111180 Zranb1Q7M760 708 aa17.17■□□□□ 0.34
Trim50-202ENSMUST00000111180 Pik3c2bE9QAN8 1632 aa17.17■□□□□ 0.34
Trim50-202ENSMUST00000111180 Plekhg5Q66T02 1073 aa17.15■□□□□ 0.34
Trim50-202ENSMUST00000111180 Usp40Q8BWR4 1235 aa17.15■□□□□ 0.34
Trim50-202ENSMUST00000111180 IqubQ8CDK3 788 aa17.15■□□□□ 0.34
Trim50-202ENSMUST00000111180 NgefQ8CHT1 710 aa17.15■□□□□ 0.34
Trim50-202ENSMUST00000111180 Smim5Q8BT42 78 aa17.14■□□□□ 0.33
Trim50-202ENSMUST00000111180 Gtf2e1Q9D0D5 440 aa17.14■□□□□ 0.33
Trim50-202ENSMUST00000111180 Siglec1Q62230 1695 aa17.14■□□□□ 0.33
Trim50-202ENSMUST00000111180 Emilin2Q8K482 1074 aa17.13■□□□□ 0.33
Trim50-202ENSMUST00000111180 Lrp6O88572 1613 aa17.13■□□□□ 0.33
Trim50-202ENSMUST00000111180 Stag3O70576 1240 aa17.12■□□□□ 0.33
Trim50-202ENSMUST00000111180 Ddx54Q8K4L0 874 aaKnown RBP17.12■□□□□ 0.33
Trim50-202ENSMUST00000111180 Plekhg1F6S200 1446 aa17.12■□□□□ 0.33
Trim50-202ENSMUST00000111180 D430041D05RikF6ZGR6 1678 aa17.12■□□□□ 0.33
Trim50-202ENSMUST00000111180 DccP70211 1447 aa17.11■□□□□ 0.33
Trim50-202ENSMUST00000111180 Wnk3Q80XP9 1757 aa17.11■□□□□ 0.33
Trim50-202ENSMUST00000111180 Idi1P58044 227 aa17.1■□□□□ 0.33
Trim50-202ENSMUST00000111180 Acsbg1Q99PU5 721 aa17.1■□□□□ 0.33
Trim50-202ENSMUST00000111180 Atp2b2Q9R0K7 1198 aa17.1■□□□□ 0.33
Trim50-202ENSMUST00000111180 Sbno1Q689Z5 1390 aa17.1■□□□□ 0.33
Trim50-202ENSMUST00000111180 Gm16486A0A1D5RMD1 1434 aa17.09■□□□□ 0.33
Trim50-202ENSMUST00000111180 MpndQ3TV65 487 aa17.09■□□□□ 0.33
Trim50-202ENSMUST00000111180 Mink1Q9JM52 1308 aa17.08■□□□□ 0.33
Trim50-202ENSMUST00000111180 Sipa1l2Q80TE4 1722 aa17.08■□□□□ 0.33
Trim50-202ENSMUST00000111180 NinlQ6ZQ12 1394 aa17.08■□□□□ 0.32
Trim50-202ENSMUST00000111180 Usp32F8VPZ3 1604 aa17.08■□□□□ 0.32
Trim50-202ENSMUST00000111180 N4bp2F8VQG7 1678 aaKnown RBP17.07■□□□□ 0.32
Trim50-202ENSMUST00000111180 Cep170bQ80U49 1574 aa17.07■□□□□ 0.32
Trim50-202ENSMUST00000111180 Arhgef1Q61210 920 aaKnown RBP17.07■□□□□ 0.32
Trim50-202ENSMUST00000111180 Ap3b2Q9JME5 1082 aa17.06■□□□□ 0.32
Trim50-202ENSMUST00000111180 Tmem2Q5FWI3 1383 aa17.05■□□□□ 0.32
Trim50-202ENSMUST00000111180 Zbtb4Q5F293 982 aa17.05■□□□□ 0.32
Trim50-202ENSMUST00000111180 Marf1Q8BJ34 1730 aaKnown RBP17.05■□□□□ 0.32
Trim50-202ENSMUST00000111180 Eno4Q8C042 619 aa17.05■□□□□ 0.32
Trim50-202ENSMUST00000111180 C5P06684 1680 aa17.04■□□□□ 0.32
Trim50-202ENSMUST00000111180 Znf316Q6PGE4 1016 aa17.04■□□□□ 0.32
Trim50-202ENSMUST00000111180 Abca14E9Q8F8 1683 aa17.04■□□□□ 0.32
Trim50-202ENSMUST00000111180 CenpjQ569L8 1344 aa17.03■□□□□ 0.32
Trim50-202ENSMUST00000111180 InsrP15208 1372 aa17.02■□□□□ 0.32
Trim50-202ENSMUST00000111180 Lrrc59Q922Q8 307 aaKnown RBP17.02■□□□□ 0.32
Trim50-202ENSMUST00000111180 Sirt1Q923E4 737 aa17.02■□□□□ 0.32
Trim50-202ENSMUST00000111180 Abcc10Q8R4P9 1501 aa17.01■□□□□ 0.31
Trim50-202ENSMUST00000111180 Als2Q920R0 1651 aa17■□□□□ 0.31
Trim50-202ENSMUST00000111180 Cadps2Q8BYR5 1297 aa16.99■□□□□ 0.31
Trim50-202ENSMUST00000111180 Mapk8ip2Q9ERE9 830 aa16.99■□□□□ 0.31
Trim50-202ENSMUST00000111180 Smg6P61406 1418 aaKnown RBP16.99■□□□□ 0.31
Trim50-202ENSMUST00000111180 Tex14Q7M6U3 1450 aa16.98■□□□□ 0.31
Trim50-202ENSMUST00000111180 InhbeO08717 350 aa16.98■□□□□ 0.31
Trim50-202ENSMUST00000111180 Slc24a1Q91WD8 1130 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms