RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Kidins220E9Q9B7 1793 aa14.64□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Chmp4cQ9D7F7 232 aa14.64□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Srpk2O54781 681 aaKnown RBP14.64□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Ipo8Q7TMY7 1010 aa14.63□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Vsig10D3YX43 558 aa14.63□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Gtpbp6Q3U6U5 514 aa14.63□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Fam13bQ8K2H3 851 aa14.62□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Cnga1P29974 684 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Mknk2Q8CDB0 459 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Kif1bQ60575 1816 aaKnown RBP14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Ttc21bQ0HA38 1315 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Kiaa1210E9Q0C6 1637 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Gse1Q3U3C9 1213 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Hecw1Q8K4P8 1604 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Ssh1Q76I79 1042 aa14.61□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Zfp444Q3TDV8 331 aaKnown RBP14.6□□□□□ -0.07
Sdc1-201ENSMUST00000020911 PrxO55103 1391 aa14.6□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Iqgap1Q9JKF1 1657 aaKnown RBP14.6□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Atp1b4Q99ME6 356 aa14.6□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Plcb2A3KGF7 1181 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Antxr1Q9CZ52 562 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 ErbinQ80TH2 1402 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Ube2q2Q8K2Z8 378 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Erich6bQ9D4S6 220 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 ShprhQ7TPQ3 1674 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Kiaa0753Q6A000 959 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Apbb1Q9QXJ1 710 aa14.59□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Zfyve16Q80U44 1528 aa14.58□□□□□ -0.07
Sdc1-201ENSMUST00000020911 Gm156Q58A37 223 aa14.58□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Arid4bA2CG63 1314 aaKnown RBP14.58□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Tmf1B9EKI3 1091 aa14.58□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ak9G3UYQ4 1894 aa14.58□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Zscan21Q07231 555 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Zscan10Q3URR7 782 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ylpm1Q9R0I7 1386 aaKnown RBP14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Safb2Q80YR5 991 aaKnown RBP14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Podxl2Q8CAE9 603 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Cep170Q6A065 1588 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Esx1O88933 382 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Usp40Q8BWR4 1235 aa14.57□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Cbx1P83917 185 aaKnown RBP14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Gtf2e1Q9D0D5 440 aa14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 TnikP83510 1323 aa14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Adamts13Q769J6 1426 aa14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Xrn1P97789 1719 aaKnown RBP14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ptch1Q61115 1434 aa14.56□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Abcc6Q9R1S7 1498 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Neurl4Q5NCX5 1563 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ppp1r18Q8BQ30 594 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Tulp4Q9JIL5 1547 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Nectin2P32507 530 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 BbxQ8VBW5 907 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Fbxo3Q9DC63 480 aa14.55□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Kdm2bQ6P1G2 1309 aa14.54□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Abca9Q8K449 1623 aa14.54□□□□□ -0.08
Sdc1-201ENSMUST00000020911 OvosQ3UU35 1456 aa14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ppip5k1A2ARP1 1436 aa14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Tnpo1Q8BFY9 898 aaKnown RBP14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Ccdc183A2AJB1 534 aa14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Fam114a1Q9D281 569 aa14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Robo2Q7TPD3 1470 aa14.53□□□□□ -0.08
Sdc1-201ENSMUST00000020911 Nos1Q9Z0J4 1429 aa14.52□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Fam184bQ0KK56 942 aa14.51□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Nlrp6Q91WS2 869 aa14.51□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Kdm5cP41230 1554 aa14.51□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Stag3O70576 1240 aa14.5□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Dcaf11Q91VU6 549 aa14.5□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Stk26Q99JT2 416 aa14.5□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Mak16Q8BGS0 296 aaKnown RBP14.49□□□□□ -0.09
Sdc1-201ENSMUST00000020911 CrbnQ8C7D2 445 aa14.49□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Speer4f1Q9D5Q6 258 aa14.49□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Sptbn5F6UCX4 1208 aa14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Kiaa1211Q5PR69 1207 aa14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Abca6Q8K441 1624 aa14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Puf60Q3UEB3 564 aaKnown RBP14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Znf518aB2RRF6 1478 aaKnown RBP14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Ccdc94Q9D6J3 314 aa14.48□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Arid4aF8VPQ2 1261 aaKnown RBP14.47□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Ush1cQ9ES64 910 aa14.47□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Col17a1Q07563 1470 aa14.47□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Gzf1Q4VBD9 706 aa14.46□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Abca17E9PX95 1733 aa14.46□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Gli2Q0VGT2 1544 aa14.46□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Myo5cE9Q1F5 1742 aa14.46□□□□□ -0.09
Sdc1-201ENSMUST00000020911 Smc5Q8CG46 1101 aaKnown RBP14.46□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Kif7B7ZNG0 1348 aa14.45□□□□□ -0.1
Sdc1-201ENSMUST00000020911 AatkQ80YE4 1365 aa14.45□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Pank2Q3U4S0 443 aa14.45□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Ppp2r1aQ76MZ3 589 aa14.45□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Catsper2A2ARP9 588 aa14.44□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Plin1Q8CGN5 517 aa14.44□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Neurod2Q62414 383 aa14.44□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Mkrn3Q60764 544 aa14.43□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Kank4Q6P9J5 1016 aa14.43□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Bms1Q6PGF5 1284 aaKnown RBP14.42□□□□□ -0.1
Sdc1-201ENSMUST00000020911 AnkarA2RT91 1465 aa14.42□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Kcnj4P52189 445 aa14.42□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Depdc5P61460 1591 aa14.41□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Atp2b3Q0VF55 1220 aa14.41□□□□□ -0.1
Sdc1-201ENSMUST00000020911 Myo3aQ8K3H5 1613 aa14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms