RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W TY1B-GR2Q12269 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-OLQ12273 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W TY1B-DR3Q99231 1755 aa-0.46□□□□□ -2.48
YOP1YPR028W YHR050W-AQ05451 56 aa-0.46□□□□□ -2.48
YOP1YPR028W YKL065W-AQ2V2P2 73 aa-0.46□□□□□ -2.48
YOP1YPR028W YDR182W-AQ3E796 67 aa-0.46□□□□□ -2.48
YOP1YPR028W YKL018C-AQ3E7A7 99 aa-0.46□□□□□ -2.48
YOP1YPR028W MOT1P32333 1867 aa-0.46□□□□□ -2.48
YOP1YPR028W YOR008C-AQ3E7B9 74 aa-0.48□□□□□ -2.49
YOP1YPR028W MEC1P38111 2368 aa-0.48□□□□□ -2.49
YOP1YPR028W YDL022C-AP0C5L6 82 aa-0.49□□□□□ -2.49
YOP1YPR028W POC4Q12245 148 aaPredicted RBP-0.49□□□□□ -2.49
YOP1YPR028W LSM2P38203 95 aaKnown RBP-0.5□□□□□ -2.49
YOP1YPR028W OLI1P61829 76 aa-0.5□□□□□ -2.49
YOP1YPR028W YOR314WQ12506 109 aa-0.5□□□□□ -2.49
YOP1YPR028W RPS27AP35997 82 aaKnown RBP-0.51□□□□□ -2.49
YOP1YPR028W SIP18P50263 79 aa-0.51□□□□□ -2.49
YOP1YPR028W SMC4Q12267 1418 aa-0.51□□□□□ -2.49
YOP1YPR028W TRA1P38811 3744 aa-0.52□□□□□ -2.49
YOP1YPR028W UTP10P42945 1769 aaKnown RBP-0.52□□□□□ -2.49
YOP1YPR028W YPR145C-AQ2V2P0 78 aa-0.52□□□□□ -2.49
YOP1YPR028W YGL194C-AQ2V2P6 80 aa-0.52□□□□□ -2.49
YOP1YPR028W ATP17Q06405 101 aa-0.53□□□□□ -2.49
YOP1YPR028W YLR146W-AQ2V2P1 62 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-LR1P0C2J3 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-FP0CX63 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-GR2P0CX64 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-CP25384 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-DR2Q03494 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-DR3Q07791 1770 aaKnown RBP-0.53□□□□□ -2.49
YOP1YPR028W TY2B-OR1Q12113 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-DR1Q12472 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-BQ12491 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W TY2B-OR2Q12501 1770 aa-0.53□□□□□ -2.49
YOP1YPR028W LTE1P07866 1435 aa-0.54□□□□□ -2.5
YOP1YPR028W VPS13Q07878 3144 aa-0.54□□□□□ -2.5
YOP1YPR028W RPO21P04050 1733 aaKnown RBP-0.54□□□□□ -2.5
YOP1YPR028W CWP2P43497 92 aa-0.54□□□□□ -2.5
YOP1YPR028W TOM1Q03280 3268 aa-0.55□□□□□ -2.5
YOP1YPR028W VTH1P40438 1549 aa-0.55□□□□□ -2.5
YOP1YPR028W VTH2P40890 1549 aa-0.55□□□□□ -2.5
YOP1YPR028W YSP2Q06681 1438 aa-0.55□□□□□ -2.5
YOP1YPR028W QCR9P22289 66 aa-0.56□□□□□ -2.5
YOP1YPR028W TOS6P48560 102 aa-0.56□□□□□ -2.5
YOP1YPR028W YBR200W-AQ3E755 54 aa-0.56□□□□□ -2.5
YOP1YPR028W YOR394C-AQ8TGJ0 55 aa-0.56□□□□□ -2.5
YOP1YPR028W SIN3P22579 1536 aa-0.56□□□□□ -2.5
YOP1YPR028W MMS22Q06164 1454 aa-0.56□□□□□ -2.5
YOP1YPR028W IRC20Q06554 1556 aa-0.57□□□□□ -2.5
YOP1YPR028W APC1P53886 1748 aa-0.57□□□□□ -2.5
YOP1YPR028W SWM2P40342 146 aa-0.57□□□□□ -2.5
YOP1YPR028W YGR121W-AQ3E816 71 aa-0.57□□□□□ -2.5
YOP1YPR028W YOR011W-AQ3E807 68 aa-0.58□□□□□ -2.5
YOP1YPR028W TY1B-NL2Q99337 1749 aaKnown RBP-0.58□□□□□ -2.5
YOP1YPR028W SPO14P36126 1683 aa-0.59□□□□□ -2.5
YOP1YPR028W YGR035W-AQ45U48 73 aa-0.6□□□□□ -2.51
YOP1YPR028W YMR105W-AQ8TGS8 64 aa-0.6□□□□□ -2.51
YOP1YPR028W YBL039W-BP0C268 59 aa-0.61□□□□□ -2.51
YOP1YPR028W YOR032W-AQ8TGS1 66 aa-0.61□□□□□ -2.51
YOP1YPR028W KOG1P38873 1557 aa-0.62□□□□□ -2.51
YOP1YPR028W PAU7P39545 55 aa-0.64□□□□□ -2.51
YOP1YPR028W COA2Q3E823 68 aa-0.65□□□□□ -2.51
YOP1YPR028W ESC1Q03661 1658 aaKnown RBP-0.66□□□□□ -2.52
YOP1YPR028W TY3B-GQ99315 1547 aa-0.67□□□□□ -2.52
YOP1YPR028W TIM12P32830 109 aa-0.67□□□□□ -2.52
YOP1YPR028W SSS1P35179 80 aa-0.67□□□□□ -2.52
YOP1YPR028W YDR119W-AQ2V2P9 66 aa-0.68□□□□□ -2.52
YOP1YPR028W YDR524C-BQ3E6R4 66 aa-0.68□□□□□ -2.52
YOP1YPR028W YGL258W-AQ3E740 77 aa-0.68□□□□□ -2.52
YOP1YPR028W YOR072W-BQ3E832 53 aa-0.68□□□□□ -2.52
YOP1YPR028W ESP1Q03018 1630 aa-0.68□□□□□ -2.52
YOP1YPR028W YLL006W-AQ3E814 58 aa-0.69□□□□□ -2.52
YOP1YPR028W HUB1Q6Q546 73 aa-0.69□□□□□ -2.52
YOP1YPR028W Q0017Q9ZZX8 53 aa-0.69□□□□□ -2.52
YOP1YPR028W THO2P53552 1597 aaKnown RBP-0.7□□□□□ -2.52
YOP1YPR028W HAP1P0CE41 1502 aa-0.71□□□□□ -2.52
YOP1YPR028W RPS27BP38711 82 aa-0.72□□□□□ -2.52
YOP1YPR028W YOR192C-CQ3E736 78 aa-0.72□□□□□ -2.52
YOP1YPR028W VPS15P22219 1454 aa-0.73□□□□□ -2.53
YOP1YPR028W MLP1Q02455 1875 aaKnown RBP-0.73□□□□□ -2.53
YOP1YPR028W TY1B-DR4Q07793 1604 aa-0.73□□□□□ -2.53
YOP1YPR028W YML054C-AQ3E809 52 aa-0.73□□□□□ -2.53
YOP1YPR028W BCK1Q01389 1478 aa-0.73□□□□□ -2.53
YOP1YPR028W SPI1P40092 148 aa-0.74□□□□□ -2.53
YOP1YPR028W RPO31P04051 1460 aa-0.74□□□□□ -2.53
YOP1YPR028W FLO1P32768 1537 aa-0.75□□□□□ -2.53
YOP1YPR028W FIG2P25653 1609 aa-0.75□□□□□ -2.53
YOP1YPR028W ERI1P62651 68 aaKnown RBP-0.76□□□□□ -2.53
YOP1YPR028W YBR230W-AQ3E762 66 aa-0.76□□□□□ -2.53
YOP1YPR028W YGR146C-AQ8TGT9 53 aa-0.77□□□□□ -2.53
YOP1YPR028W FKS3Q04952 1785 aa-0.78□□□□□ -2.53
YOP1YPR028W SSK2P53599 1579 aa-0.78□□□□□ -2.53
YOP1YPR028W YHR073W-AP0C5N7 58 aa-0.78□□□□□ -2.53
YOP1YPR028W YDR034W-BQ6Q5X2 51 aa-0.78□□□□□ -2.53
YOP1YPR028W DNF2Q12675 1612 aa-0.78□□□□□ -2.54
YOP1YPR028W UFD4P33202 1483 aa-0.79□□□□□ -2.54
YOP1YPR028W SKI3P17883 1432 aaKnown RBP-0.8□□□□□ -2.54
YOP1YPR028W YHR213W-AQ8TGT4 77 aa-0.8□□□□□ -2.54
YOP1YPR028W RKR1Q04781 1562 aa-0.81□□□□□ -2.54
YOP1YPR028W YDR034C-AP0C289 58 aa-0.81□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms