RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C YHR050W-AQ05451 56 aa-0.93□□□□□ -2.56
SNU56YDR240C MOT1P32333 1867 aa-0.94□□□□□ -2.56
SNU56YDR240C UTP10P42945 1769 aaKnown RBP-0.94□□□□□ -2.56
SNU56YDR240C VTH1P40438 1549 aa-0.95□□□□□ -2.56
SNU56YDR240C VTH2P40890 1549 aa-0.95□□□□□ -2.56
SNU56YDR240C YDL022C-AP0C5L6 82 aa-0.97□□□□□ -2.56
SNU56YDR240C TOS6P48560 102 aa-0.97□□□□□ -2.56
SNU56YDR240C SWR1Q05471 1514 aa-0.97□□□□□ -2.56
SNU56YDR240C SPO14P36126 1683 aa-0.97□□□□□ -2.57
SNU56YDR240C SIP18P50263 79 aa-0.98□□□□□ -2.57
SNU56YDR240C MDS3P53094 1487 aa-0.98□□□□□ -2.57
SNU56YDR240C MEC1P38111 2368 aa-0.98□□□□□ -2.57
SNU56YDR240C POC4Q12245 148 aaPredicted RBP-0.99□□□□□ -2.57
SNU56YDR240C YMR175W-AQ3E766 64 aa-0.99□□□□□ -2.57
SNU56YDR240C PDR10P51533 1564 aa-0.99□□□□□ -2.57
SNU56YDR240C SMC4Q12267 1418 aa-0.99□□□□□ -2.57
SNU56YDR240C TY1B-NL2Q99337 1749 aaKnown RBP-0.99□□□□□ -2.57
SNU56YDR240C YOR343CQ12484 108 aa-0.99□□□□□ -2.57
SNU56YDR240C YMR082CQ04276 118 aa-1□□□□□ -2.57
SNU56YDR240C YOR105WQ08504 108 aa-1□□□□□ -2.57
SNU56YDR240C IRC20Q06554 1556 aa-1.01□□□□□ -2.57
SNU56YDR240C LSM2P38203 95 aaKnown RBP-1.01□□□□□ -2.57
SNU56YDR240C OLI1P61829 76 aa-1.01□□□□□ -2.57
SNU56YDR240C YOR394C-AQ8TGJ0 55 aa-1.03□□□□□ -2.57
SNU56YDR240C YLR146W-AQ2V2P1 62 aa-1.04□□□□□ -2.58
SNU56YDR240C YBR200W-AQ3E755 54 aa-1.04□□□□□ -2.58
SNU56YDR240C YCL001W-BQ96VH2 84 aa-1.04□□□□□ -2.58
SNU56YDR240C YPR145C-AQ2V2P0 78 aa-1.05□□□□□ -2.58
SNU56YDR240C YCR075W-AQ3E830 75 aa-1.05□□□□□ -2.58
SNU56YDR240C APC1P53886 1748 aa-1.05□□□□□ -2.58
SNU56YDR240C SIN3P22579 1536 aa-1.06□□□□□ -2.58
SNU56YDR240C ZEO1Q08245 113 aa-1.06□□□□□ -2.58
SNU56YDR240C YKL065W-AQ2V2P2 73 aa-1.06□□□□□ -2.58
SNU56YDR240C ATP17Q06405 101 aa-1.07□□□□□ -2.58
SNU56YDR240C YOR314WQ12506 109 aa-1.07□□□□□ -2.58
SNU56YDR240C YOR011W-AQ3E807 68 aa-1.09□□□□□ -2.58
SNU56YDR240C YOR032W-AQ8TGS1 66 aa-1.09□□□□□ -2.58
SNU56YDR240C RPO21P04050 1733 aaKnown RBP-1.09□□□□□ -2.58
SNU56YDR240C YBL039W-BP0C268 59 aa-1.1□□□□□ -2.59
SNU56YDR240C YGR121W-AQ3E816 71 aa-1.1□□□□□ -2.59
SNU56YDR240C KOG1P38873 1557 aa-1.11□□□□□ -2.59
SNU56YDR240C TY3B-GQ99315 1547 aa-1.11□□□□□ -2.59
SNU56YDR240C YDR524C-BQ3E6R4 66 aa-1.11□□□□□ -2.59
SNU56YDR240C CSF1Q12150 2958 aa-1.11□□□□□ -2.59
SNU56YDR240C COA2Q3E823 68 aa-1.12□□□□□ -2.59
SNU56YDR240C YGR035W-AQ45U48 73 aa-1.12□□□□□ -2.59
SNU56YDR240C QCR9P22289 66 aa-1.12□□□□□ -2.59
SNU56YDR240C RPS27BP38711 82 aa-1.12□□□□□ -2.59
SNU56YDR240C YLL006W-AQ3E814 58 aa-1.12□□□□□ -2.59
SNU56YDR240C HAP1P0CE41 1502 aa-1.13□□□□□ -2.59
SNU56YDR240C YSP2Q06681 1438 aa-1.13□□□□□ -2.59
SNU56YDR240C CWP2P43497 92 aa-1.13□□□□□ -2.59
SNU56YDR240C YPL225WQ08971 146 aaKnown RBP-1.13□□□□□ -2.59
SNU56YDR240C YGL194C-AQ2V2P6 80 aa-1.13□□□□□ -2.59
SNU56YDR240C NUM1Q00402 2748 aa-1.13□□□□□ -2.59
SNU56YDR240C SWM2P40342 146 aa-1.15□□□□□ -2.59
SNU56YDR240C MMS22Q06164 1454 aa-1.15□□□□□ -2.59
SNU56YDR240C YDR119W-AQ2V2P9 66 aa-1.16□□□□□ -2.59
SNU56YDR240C YGL258W-AQ3E740 77 aa-1.16□□□□□ -2.59
SNU56YDR240C LTE1P07866 1435 aa-1.19□□□□□ -2.6
SNU56YDR240C TIM12P32830 109 aa-1.19□□□□□ -2.6
SNU56YDR240C YGR146C-AQ8TGT9 53 aa-1.19□□□□□ -2.6
SNU56YDR240C PAU7P39545 55 aa-1.2□□□□□ -2.6
SNU56YDR240C SSS1P35179 80 aa-1.21□□□□□ -2.6
SNU56YDR240C VPS15P22219 1454 aa-1.22□□□□□ -2.6
SNU56YDR240C YBR230W-AQ3E762 66 aa-1.24□□□□□ -2.61
SNU56YDR240C YOR072W-BQ3E832 53 aa-1.24□□□□□ -2.61
SNU56YDR240C ESC1Q03661 1658 aaKnown RBP-1.24□□□□□ -2.61
SNU56YDR240C HUB1Q6Q546 73 aa-1.25□□□□□ -2.61
SNU56YDR240C ERI1P62651 68 aaKnown RBP-1.26□□□□□ -2.61
SNU56YDR240C FKS3Q04952 1785 aa-1.27□□□□□ -2.61
SNU56YDR240C MLP1Q02455 1875 aaKnown RBP-1.27□□□□□ -2.61
SNU56YDR240C ARO1P08566 1588 aaKnown RBP-1.28□□□□□ -2.61
SNU56YDR240C ESP1Q03018 1630 aa-1.28□□□□□ -2.61
SNU56YDR240C SPI1P40092 148 aa-1.3□□□□□ -2.62
SNU56YDR240C RPS30AP0CX33 63 aaKnown RBP-1.32□□□□□ -2.62
SNU56YDR240C RPS30BP0CX34 63 aaKnown RBP-1.32□□□□□ -2.62
SNU56YDR240C FIG2P25653 1609 aa-1.33□□□□□ -2.62
SNU56YDR240C DNF2Q12675 1612 aa-1.33□□□□□ -2.62
SNU56YDR240C IQG1Q12280 1495 aa-1.34□□□□□ -2.62
SNU56YDR240C Q0017Q9ZZX8 53 aa-1.34□□□□□ -2.62
SNU56YDR240C UFD4P33202 1483 aa-1.35□□□□□ -2.63
SNU56YDR240C CUP1-1P0CX80 61 aa-1.36□□□□□ -2.63
SNU56YDR240C CUP1-2P0CX81 61 aa-1.36□□□□□ -2.63
SNU56YDR240C DNF1P32660 1571 aa-1.36□□□□□ -2.63
SNU56YDR240C PDR12Q02785 1511 aa-1.37□□□□□ -2.63
SNU56YDR240C YLR157W-DP0CE99 70 aa-1.37□□□□□ -2.63
SNU56YDR240C YOR192C-CQ3E736 78 aa-1.38□□□□□ -2.63
SNU56YDR240C YOL131WQ08270 108 aa-1.39□□□□□ -2.63
SNU56YDR240C THO2P53552 1597 aaKnown RBP-1.39□□□□□ -2.63
SNU56YDR240C TRA1P38811 3744 aa-1.4□□□□□ -2.63
SNU56YDR240C RRP5Q05022 1729 aaKnown RBP-1.4□□□□□ -2.63
SNU56YDR240C IML1P47170 1584 aa-1.4□□□□□ -2.63
SNU56YDR240C SNQ2P32568 1501 aaKnown RBP-1.4□□□□□ -2.63
SNU56YDR240C YOL166W-AQ8TGJ1 51 aa-1.41□□□□□ -2.63
SNU56YDR240C IRA1P18963 3092 aa-1.41□□□□□ -2.64
SNU56YDR240C PDR15Q04182 1529 aaKnown RBP-1.42□□□□□ -2.64
SNU56YDR240C BCK1Q01389 1478 aa-1.42□□□□□ -2.64
SNU56YDR240C YFL041W-AQ3E817 63 aa-1.43□□□□□ -2.64
SNU56YDR240C DOP1Q03921 1698 aa-1.43□□□□□ -2.64
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms