RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C VPS15P22219 1454 aa1.22□□□□□ -2.21
IRC4YDR540C MYO4P32492 1471 aa1.22□□□□□ -2.21
IRC4YDR540C MOT1P32333 1867 aa1.22□□□□□ -2.21
IRC4YDR540C BRR2P32639 2163 aaKnown RBP1.21□□□□□ -2.22
IRC4YDR540C HAP1P0CE41 1502 aa1.21□□□□□ -2.22
IRC4YDR540C SNQ2P32568 1501 aaKnown RBP1.21□□□□□ -2.22
IRC4YDR540C PDR5P33302 1511 aaKnown RBP1.21□□□□□ -2.22
IRC4YDR540C NUM1Q00402 2748 aa1.21□□□□□ -2.22
IRC4YDR540C UFD4P33202 1483 aa1.21□□□□□ -2.22
IRC4YDR540C HMRA2P0CY13 119 aa1.21□□□□□ -2.22
IRC4YDR540C NHP2P32495 156 aaPredicted RBP1.21□□□□□ -2.22
IRC4YDR540C MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
IRC4YDR540C YBR292CP38357 123 aa1.21□□□□□ -2.22
IRC4YDR540C VPS55P47111 140 aa1.21□□□□□ -2.22
IRC4YDR540C SNA2P56508 79 aa1.21□□□□□ -2.22
IRC4YDR540C IRC21Q04772 201 aa1.21□□□□□ -2.22
IRC4YDR540C YOR314WQ12506 109 aa1.21□□□□□ -2.22
IRC4YDR540C VMA9Q3E7B6 73 aa1.21□□□□□ -2.22
IRC4YDR540C TY4B-JP47024 1803 aa1.21□□□□□ -2.22
IRC4YDR540C TY4B-HP0C2J7 1802 aa1.2□□□□□ -2.22
IRC4YDR540C SLH1P53327 1967 aaKnown RBP1.2□□□□□ -2.22
IRC4YDR540C YAL065CO13511 128 aa1.2□□□□□ -2.22
IRC4YDR540C YIL163CP40448 117 aa1.2□□□□□ -2.22
IRC4YDR540C MRX7P53869 86 aa1.2□□□□□ -2.22
IRC4YDR540C YOR105WQ08504 108 aa1.2□□□□□ -2.22
IRC4YDR540C YPR145C-AQ2V2P0 78 aa1.2□□□□□ -2.22
IRC4YDR540C YGL041C-BQ3E750 60 aa1.2□□□□□ -2.22
IRC4YDR540C YLR285C-AQ3E771 56 aa1.2□□□□□ -2.22
IRC4YDR540C RPS22BQ3E7Y3 130 aaKnown RBP1.2□□□□□ -2.22
IRC4YDR540C YRF1-1P0CX20 1796 aa1.19□□□□□ -2.22
IRC4YDR540C YRF1-5P0CX21 1796 aa1.19□□□□□ -2.22
IRC4YDR540C YRF1-8P0CX22 1796 aa1.19□□□□□ -2.22
IRC4YDR540C RIM15P43565 1770 aa1.19□□□□□ -2.22
IRC4YDR540C ACC1Q00955 2233 aaKnown RBP1.19□□□□□ -2.22
IRC4YDR540C YER188C-AP0C0V2 99 aa1.19□□□□□ -2.22
IRC4YDR540C YNL198CP40166 100 aa1.19□□□□□ -2.22
IRC4YDR540C IRC20Q06554 1556 aa1.19□□□□□ -2.22
IRC4YDR540C YNR034W-AQ3E841 98 aa1.19□□□□□ -2.22
IRC4YDR540C TAR1Q8TGM6 124 aa1.19□□□□□ -2.22
IRC4YDR540C USO1P25386 1790 aa1.19□□□□□ -2.22
IRC4YDR540C UTP10P42945 1769 aaKnown RBP1.19□□□□□ -2.22
IRC4YDR540C APC1P53886 1748 aa1.18□□□□□ -2.22
IRC4YDR540C IML1P47170 1584 aa1.18□□□□□ -2.22
IRC4YDR540C MMS1Q06211 1407 aa1.18□□□□□ -2.22
IRC4YDR540C YSF3P0C074 85 aaPredicted RBP1.18□□□□□ -2.22
IRC4YDR540C AIM19P40502 157 aa1.18□□□□□ -2.22
IRC4YDR540C SPC1P46965 94 aa1.18□□□□□ -2.22
IRC4YDR540C BSC4P53841 131 aa1.18□□□□□ -2.22
IRC4YDR540C YIL134C-AQ45U18 67 aa1.18□□□□□ -2.22
IRC4YDR540C SPT6P23615 1451 aaKnown RBP1.18□□□□□ -2.22
IRC4YDR540C BCK1Q01389 1478 aa1.18□□□□□ -2.22
IRC4YDR540C VTH1P40438 1549 aa1.17□□□□□ -2.22
IRC4YDR540C VTH2P40890 1549 aa1.17□□□□□ -2.22
IRC4YDR540C YBL071CP38185 102 aa1.17□□□□□ -2.22
IRC4YDR540C AIM4P38305 123 aaPredicted RBP1.17□□□□□ -2.22
IRC4YDR540C MPC2P38857 129 aa1.17□□□□□ -2.22
IRC4YDR540C YEL008WP40001 126 aa1.17□□□□□ -2.22
IRC4YDR540C YJL009WP47078 108 aa1.17□□□□□ -2.22
IRC4YDR540C YDR210WQ03482 75 aa1.17□□□□□ -2.22
IRC4YDR540C YIL102C-AQ2V2P5 75 aa1.17□□□□□ -2.22
IRC4YDR540C YNL146C-AQ3E7Z1 64 aa1.17□□□□□ -2.22
IRC4YDR540C ULS1Q08562 1619 aa1.17□□□□□ -2.22
IRC4YDR540C YBT1P32386 1661 aa1.16□□□□□ -2.22
IRC4YDR540C TY3B-GQ99315 1547 aa1.16□□□□□ -2.22
IRC4YDR540C MRPL31P14063 131 aaPredicted RBP1.16□□□□□ -2.22
IRC4YDR540C QCR9P22289 66 aa1.16□□□□□ -2.22
IRC4YDR540C YCL042WP25572 119 aa1.16□□□□□ -2.22
IRC4YDR540C SPI1P40092 148 aa1.16□□□□□ -2.22
IRC4YDR540C LCL2Q08045 131 aa1.16□□□□□ -2.22
IRC4YDR540C YGR240C-AQ3E786 66 aa1.16□□□□□ -2.22
IRC4YDR540C COA3Q3E7B2 85 aa1.16□□□□□ -2.22
IRC4YDR540C YGR121W-AQ3E816 71 aa1.16□□□□□ -2.22
IRC4YDR540C URB1P34241 1764 aaKnown RBP1.16□□□□□ -2.22
IRC4YDR540C BPH1P25356 2167 aa1.15□□□□□ -2.22
IRC4YDR540C PAU6P0CE90 120 aa1.15□□□□□ -2.23
IRC4YDR540C PAU18P0CE91 120 aa1.15□□□□□ -2.23
IRC4YDR540C RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.23
IRC4YDR540C RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.23
IRC4YDR540C PDX3P38075 228 aaKnown RBP1.15□□□□□ -2.23
IRC4YDR540C YHR173CP38864 112 aa1.15□□□□□ -2.23
IRC4YDR540C CCW12Q12127 133 aa1.15□□□□□ -2.23
IRC4YDR540C COX19Q3E731 98 aa1.15□□□□□ -2.23
IRC4YDR540C KOG1P38873 1557 aa1.15□□□□□ -2.23
IRC4YDR540C CDC25P04821 1589 aa1.14□□□□□ -2.23
IRC4YDR540C PEP1P32319 1579 aa1.14□□□□□ -2.23
IRC4YDR540C PAU1P0CE88 120 aa1.14□□□□□ -2.23
IRC4YDR540C PAU14P0CE89 120 aa1.14□□□□□ -2.23
IRC4YDR540C PAU8P0CE92 120 aa1.14□□□□□ -2.23
IRC4YDR540C PAU11P0CE93 120 aa1.14□□□□□ -2.23
IRC4YDR540C TIM12P32830 109 aa1.14□□□□□ -2.23
IRC4YDR540C PAU13P38725 120 aa1.14□□□□□ -2.23
IRC4YDR540C PAU4P53427 120 aa1.14□□□□□ -2.23
IRC4YDR540C MRPS12P53732 153 aa1.14□□□□□ -2.23
IRC4YDR540C PAU10Q03050 120 aa1.14□□□□□ -2.23
IRC4YDR540C YDR010CQ12426 110 aa1.14□□□□□ -2.23
IRC4YDR540C YKL023C-AQ2V2P3 75 aa1.14□□□□□ -2.23
IRC4YDR540C PAU9Q3E770 120 aa1.14□□□□□ -2.23
IRC4YDR540C YGR035W-AQ45U48 73 aa1.14□□□□□ -2.23
IRC4YDR540C YPR117WQ06116 2489 aa1.13□□□□□ -2.23
IRC4YDR540C YSY6P38374 65 aa1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms