Protein–RNA interactions for Protein: P40001

YEL008W, Uncharacterized protein YEL008W, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEL008WP40001 NSR1YGR159C 1245 nt14.56□□□□□ -0.08
YEL008WP40001 YML009W-BYML009W-B 477 nt14.31□□□□□ -0.12
YEL008WP40001 NOP1YDL014W 984 nt13.79□□□□□ -0.2
YEL008WP40001 MDJ1YFL016C 1536 nt13.23□□□□□ -0.29
YEL008WP40001 YKL036CYKL036C 393 nt12.39□□□□□ -0.43
YEL008WP40001 YJL027CYJL027C 417 nt12.2□□□□□ -0.46
YEL008WP40001 SRX1YKL086W 384 nt12.04□□□□□ -0.48
YEL008WP40001 Q0297Q0297 156 nt11.95□□□□□ -0.5
YEL008WP40001 DBP2YNL112W 1641 nt11.57□□□□□ -0.56
YEL008WP40001 YBR190WYBR190W 312 nt11.4□□□□□ -0.58
YEL008WP40001 YCR051WYCR051W 669 nt11.38□□□□□ -0.59
YEL008WP40001 RTC3YHR087W 336 nt11.11□□□□□ -0.63
YEL008WP40001 TRN1tP(UGG)A 72 nt11.1□□□□□ -0.63
YEL008WP40001 SUF9tP(UGG)F 72 nt11.1□□□□□ -0.63
YEL008WP40001 SUF8tP(UGG)H 72 nt11.1□□□□□ -0.63
YEL008WP40001 tP(UGG)LtP(UGG)L 72 nt11.1□□□□□ -0.63
YEL008WP40001 SUF7tP(UGG)M 72 nt11.1□□□□□ -0.63
YEL008WP40001 tP(UGG)N1tP(UGG)N1 72 nt11.1□□□□□ -0.63
YEL008WP40001 tP(UGG)N2tP(UGG)N2 72 nt11.1□□□□□ -0.63
YEL008WP40001 tP(UGG)O1tP(UGG)O1 72 nt11.1□□□□□ -0.63
YEL008WP40001 SUF11tP(UGG)O2 72 nt11.1□□□□□ -0.63
YEL008WP40001 SCS3YGL126W 1143 nt11.08□□□□□ -0.64
YEL008WP40001 CCC1YLR220W 969 nt10.95□□□□□ -0.66
YEL008WP40001 RVS167YDR388W 1449 nt10.82□□□□□ -0.68
YEL008WP40001 SSA3YBL075C 1950 nt10.78□□□□□ -0.68
YEL008WP40001 YOL085CYOL085C 342 nt10.73□□□□□ -0.69
YEL008WP40001 RPP1BYDL130W 321 nt10.72□□□□□ -0.69
YEL008WP40001 SCJ1YMR214W 1134 nt10.68□□□□□ -0.7
YEL008WP40001 PUT4YOR348C 1884 nt10.62□□□□□ -0.71
YEL008WP40001 PKP1YIL042C 1185 nt10.58□□□□□ -0.72
YEL008WP40001 tP(UGG)O3tP(UGG)O3 72 nt10.37□□□□□ -0.75
YEL008WP40001 SHR5YOL110W 714 nt10.36□□□□□ -0.75
YEL008WP40001 ARE1YCR048W 1833 nt10.31□□□□□ -0.76
YEL008WP40001 PET122YER153C 765 nt10.28□□□□□ -0.76
YEL008WP40001 URN1YPR152C 1398 nt10.27□□□□□ -0.76
YEL008WP40001 POA1YBR022W 534 nt10.24□□□□□ -0.77
YEL008WP40001 SAH1YER043C 1350 nt10.22□□□□□ -0.77
YEL008WP40001 OPI9YLR338W 858 nt10.21□□□□□ -0.77
YEL008WP40001 YHR049C-AYHR049C-A 297 nt10.19□□□□□ -0.78
YEL008WP40001 DEP1YAL013W 1218 nt10.14□□□□□ -0.79
YEL008WP40001 BSC6YOL137W 1494 nt10.1□□□□□ -0.79
YEL008WP40001 SCR1SCR1 522 nt10.08□□□□□ -0.8
YEL008WP40001 RPN10YHR200W 807 nt10.07□□□□□ -0.8
YEL008WP40001 YDJ1YNL064C 1230 nt10.06□□□□□ -0.8
YEL008WP40001 YNL208WYNL208W 600 nt9.98□□□□□ -0.81
YEL008WP40001 RRN5YLR141W 1092 nt9.93□□□□□ -0.82
YEL008WP40001 PUN1YLR414C 792 nt9.92□□□□□ -0.82
YEL008WP40001 BUD23YCR047C 828 nt9.91□□□□□ -0.82
YEL008WP40001 SPT5YML010W 3192 nt9.9□□□□□ -0.82
YEL008WP40001 GAR1YHR089C 618 nt9.86□□□□□ -0.83
YEL008WP40001 PTC2YER089C 1395 nt9.84□□□□□ -0.83
YEL008WP40001 ATS1YAL020C 1002 nt9.8□□□□□ -0.84
YEL008WP40001 YJR018WYJR018W 363 nt9.78□□□□□ -0.84
YEL008WP40001 NAB2YGL122C 1578 nt9.77□□□□□ -0.85
YEL008WP40001 YER088W-BYER088W-B 147 nt9.74□□□□□ -0.85
YEL008WP40001 SSA4YER103W 1929 nt9.72□□□□□ -0.85
YEL008WP40001 RSB1YOR049C 1065 nt9.62□□□□□ -0.87
YEL008WP40001 FIS1YIL065C 468 nt9.61□□□□□ -0.87
YEL008WP40001 DAL1YIR027C 1383 nt9.58□□□□□ -0.88
YEL008WP40001 TIR1YER011W 765 nt9.56□□□□□ -0.88
YEL008WP40001 YJR120WYJR120W 351 nt9.55□□□□□ -0.88
YEL008WP40001 MEP2YNL142W 1500 nt9.52□□□□□ -0.88
YEL008WP40001 FPR4YLR449W 1179 nt9.52□□□□□ -0.89
YEL008WP40001 SSA1YAL005C 1929 nt9.5□□□□□ -0.89
YEL008WP40001 RPP2BYDR382W 333 nt9.5□□□□□ -0.89
YEL008WP40001 INM2YDR287W 879 nt9.49□□□□□ -0.89
YEL008WP40001 PHO4YFR034C 939 nt9.49□□□□□ -0.89
YEL008WP40001 YPS1YLR120C 1710 nt9.43□□□□□ -0.9
YEL008WP40001 BDF1YLR399C 2061 nt9.38□□□□□ -0.91
YEL008WP40001 DCW1YKL046C 1350 nt9.35□□□□□ -0.91
YEL008WP40001 YHR165W-AYHR165W-A 312 nt9.34□□□□□ -0.91
YEL008WP40001 YBL100CYBL100C 315 nt9.34□□□□□ -0.91
YEL008WP40001 YDR095CYDR095C 411 nt9.32□□□□□ -0.92
YEL008WP40001 SRB2YHR041C 633 nt9.27□□□□□ -0.93
YEL008WP40001 TAT1YBR069C 1860 nt9.26□□□□□ -0.93
YEL008WP40001 BDH2YAL061W 1254 nt9.25□□□□□ -0.93
YEL008WP40001 EMI2YDR516C 1503 nt9.23□□□□□ -0.93
YEL008WP40001 YMR090WYMR090W 684 nt9.22□□□□□ -0.93
YEL008WP40001 FUN26YAL022C 1554 nt9.21□□□□□ -0.93
YEL008WP40001 YBR220CYBR220C 1683 nt9.18□□□□□ -0.94
YEL008WP40001 ALF1YNL148C 765 nt9.16□□□□□ -0.94
YEL008WP40001 YDL221WYDL221W 552 nt9.14□□□□□ -0.95
YEL008WP40001 PST2YDR032C 597 nt9.14□□□□□ -0.95
YEL008WP40001 RPP2AYOL039W 321 nt9.14□□□□□ -0.95
YEL008WP40001 PTP1YDL230W 1008 nt9.13□□□□□ -0.95
YEL008WP40001 TRM9YML014W 840 nt9.13□□□□□ -0.95
YEL008WP40001 CAC2YML102W 1407 nt9.11□□□□□ -0.95
YEL008WP40001 SDH1YKL148C 1923 nt9.1□□□□□ -0.95
YEL008WP40001 CCT6YDR188W 1641 nt9.07□□□□□ -0.96
YEL008WP40001 LSM3YLR438C-A 270 nt9.07□□□□□ -0.96
YEL008WP40001 WWM1YFL010C 636 nt9.06□□□□□ -0.96
YEL008WP40001 SUF2tP(AGG)C 72 nt9.03□□□□□ -0.96
YEL008WP40001 SUF10tP(AGG)N 72 nt9.03□□□□□ -0.96
YEL008WP40001 SIS1YNL007C 1059 nt9.03□□□□□ -0.96
YEL008WP40001 SCC4YER147C 1875 nt8.99□□□□□ -0.97
YEL008WP40001 IRC15YPL017C 1500 nt8.99□□□□□ -0.97
YEL008WP40001 YFL021C-AYFL021C-A 855 nt8.95□□□□□ -0.98
YEL008WP40001 YGR021WYGR021W 873 nt8.93□□□□□ -0.98
YEL008WP40001 SEC11YIR022W 504 nt8.93□□□□□ -0.98
YEL008WP40001 GIS3YLR094C 1509 nt8.92□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 14.8 ms