RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A VPS55P47111 140 aa0.9□□□□□ -2.26
YDR170W-AYDR170W-A LCL1Q02786 101 aa0.9□□□□□ -2.26
YDR170W-AYDR170W-A YIR021W-AQ3E739 70 aa0.9□□□□□ -2.26
YDR170W-AYDR170W-A PAU2P32612 120 aa0.89□□□□□ -2.27
YDR170W-AYDR170W-A PAU24P38155 120 aa0.89□□□□□ -2.27
YDR170W-AYDR170W-A YEA6P39953 335 aa0.89□□□□□ -2.27
YDR170W-AYDR170W-A LAA1P39526 2014 aa0.89□□□□□ -2.27
YDR170W-AYDR170W-A MOT1P32333 1867 aa0.89□□□□□ -2.27
YDR170W-AYDR170W-A ECM29P38737 1868 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A TAO3P40468 2376 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A YOR304C-AO14468 76 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A YIR020CP40575 100 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A GTT1P40582 234 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A YLR365WQ7LIF2 110 aa0.88□□□□□ -2.27
YDR170W-AYDR170W-A VPS13Q07878 3144 aa0.87□□□□□ -2.27
YDR170W-AYDR170W-A PRP8P33334 2413 aaKnown RBP0.86□□□□□ -2.27
YDR170W-AYDR170W-A PAU19P0CE85 124 aa0.86□□□□□ -2.27
YDR170W-AYDR170W-A PAU3P25610 124 aa0.86□□□□□ -2.27
YDR170W-AYDR170W-A MRPS12P53732 153 aa0.86□□□□□ -2.27
YDR170W-AYDR170W-A YPR117WQ06116 2489 aa0.85□□□□□ -2.27
YDR170W-AYDR170W-A FMP27Q06179 2628 aa0.84□□□□□ -2.27
YDR170W-AYDR170W-A URA2P07259 2214 aaKnown RBP0.84□□□□□ -2.28
YDR170W-AYDR170W-A TEL1P38110 2787 aa0.83□□□□□ -2.28
YDR170W-AYDR170W-A CSF1Q12150 2958 aa0.83□□□□□ -2.28
YDR170W-AYDR170W-A RUB1Q03919 77 aa0.83□□□□□ -2.28
YDR170W-AYDR170W-A TOR2P32600 2474 aaKnown RBP0.82□□□□□ -2.28
YDR170W-AYDR170W-A GCN1P33892 2672 aaKnown RBP0.82□□□□□ -2.28
YDR170W-AYDR170W-A YER039C-AP0CD97 72 aa0.82□□□□□ -2.28
YDR170W-AYDR170W-A AUA1P32450 94 aa0.82□□□□□ -2.28
YDR170W-AYDR170W-A LSM6Q06406 86 aaKnown RBP0.82□□□□□ -2.28
YDR170W-AYDR170W-A YKL068W-AQ3E826 78 aa0.82□□□□□ -2.28
YDR170W-AYDR170W-A STT4P37297 1900 aa0.81□□□□□ -2.28
YDR170W-AYDR170W-A VMA21P41806 77 aa0.81□□□□□ -2.28
YDR170W-AYDR170W-A HUR1P45820 110 aa0.81□□□□□ -2.28
YDR170W-AYDR170W-A YCL048W-AQ2V2Q2 79 aa0.81□□□□□ -2.28
YDR170W-AYDR170W-A YBR032WP38223 100 aa0.8□□□□□ -2.28
YDR170W-AYDR170W-A SMX2P40204 77 aaKnown RBP0.8□□□□□ -2.28
YDR170W-AYDR170W-A IRA1P18963 3092 aa0.79□□□□□ -2.28
YDR170W-AYDR170W-A IRA2P19158 3079 aa0.79□□□□□ -2.28
YDR170W-AYDR170W-A BUD23P25627 275 aaPredicted RBP0.79□□□□□ -2.28
YDR170W-AYDR170W-A PAU16P35994 123 aa0.79□□□□□ -2.28
YDR170W-AYDR170W-A PAU15P40585 124 aa0.79□□□□□ -2.28
YDR170W-AYDR170W-A SWC7Q06707 132 aa0.79□□□□□ -2.28
YDR170W-AYDR170W-A POL2P21951 2222 aaKnown RBP0.78□□□□□ -2.28
YDR170W-AYDR170W-A LHP1P33399 275 aaKnown RBP0.78□□□□□ -2.28
YDR170W-AYDR170W-A YHR138CP38841 114 aaPredicted RBP0.78□□□□□ -2.28
YDR170W-AYDR170W-A YOL118CQ08259 102 aa0.78□□□□□ -2.28
YDR170W-AYDR170W-A BRR2P32639 2163 aaKnown RBP0.78□□□□□ -2.28
YDR170W-AYDR170W-A TOR1P35169 2470 aa0.78□□□□□ -2.28
YDR170W-AYDR170W-A SEC16P48415 2195 aaKnown RBP0.77□□□□□ -2.29
YDR170W-AYDR170W-A YHR173CP38864 112 aa0.77□□□□□ -2.29
YDR170W-AYDR170W-A YGR164WP53291 111 aa0.77□□□□□ -2.29
YDR170W-AYDR170W-A YPL225WQ08971 146 aaKnown RBP0.77□□□□□ -2.29
YDR170W-AYDR170W-A YDR010CQ12426 110 aa0.77□□□□□ -2.29
YDR170W-AYDR170W-A YDR524C-BQ3E6R4 66 aa0.77□□□□□ -2.29
YDR170W-AYDR170W-A SEN1Q00416 2231 aaKnown RBP0.77□□□□□ -2.29
YDR170W-AYDR170W-A NUM1Q00402 2748 aa0.76□□□□□ -2.29
YDR170W-AYDR170W-A GNA1P43577 159 aaPredicted RBP0.76□□□□□ -2.29
YDR170W-AYDR170W-A IMP2P46972 177 aa0.76□□□□□ -2.29
YDR170W-AYDR170W-A YKL018C-AQ3E7A7 99 aa0.76□□□□□ -2.29
YDR170W-AYDR170W-A YLR255CO13574 117 aa0.75□□□□□ -2.29
YDR170W-AYDR170W-A SRB6P32570 121 aa0.75□□□□□ -2.29
YDR170W-AYDR170W-A YBR072C-AQ3E794 53 aa0.75□□□□□ -2.29
YDR170W-AYDR170W-A MEC1P38111 2368 aa0.75□□□□□ -2.29
YDR170W-AYDR170W-A PDX3P38075 228 aaKnown RBP0.74□□□□□ -2.29
YDR170W-AYDR170W-A YOL131WQ08270 108 aa0.74□□□□□ -2.29
YDR170W-AYDR170W-A YDR034W-BQ6Q5X2 51 aa0.74□□□□□ -2.29
YDR170W-AYDR170W-A BLM10P43583 2143 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A CCW14O13547 238 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A SHU1P38751 150 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A GCV3P39726 170 aaPredicted RBP0.73□□□□□ -2.29
YDR170W-AYDR170W-A YER137CP40083 148 aaKnown RBP0.73□□□□□ -2.29
YDR170W-AYDR170W-A YIL086CP40503 102 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A YOS1Q3E834 85 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A MIC10Q96VH5 97 aa0.73□□□□□ -2.29
YDR170W-AYDR170W-A NHP10Q03435 203 aa0.72□□□□□ -2.29
YDR170W-AYDR170W-A YMR103CQ04436 120 aa0.72□□□□□ -2.29
YDR170W-AYDR170W-A YOL164W-AQ3E7A5 60 aa0.72□□□□□ -2.29
YDR170W-AYDR170W-A YPL038W-AQ3E7B4 63 aa0.72□□□□□ -2.29
YDR170W-AYDR170W-A YCR101CP25607 182 aa0.71□□□□□ -2.3
YDR170W-AYDR170W-A RGI1P40043 161 aaPredicted RBP0.71□□□□□ -2.3
YDR170W-AYDR170W-A RPS29BP41058 56 aaKnown RBP0.71□□□□□ -2.3
YDR170W-AYDR170W-A RPS12P48589 143 aaKnown RBP0.71□□□□□ -2.3
YDR170W-AYDR170W-A MHF2Q3E829 80 aa0.71□□□□□ -2.3
YDR170W-AYDR170W-A UTP20P35194 2493 aaKnown RBP0.7□□□□□ -2.3
YDR170W-AYDR170W-A YOR289WQ12012 251 aaPredicted RBP0.7□□□□□ -2.3
YDR170W-AYDR170W-A TRA1P38811 3744 aa0.7□□□□□ -2.3
YDR170W-AYDR170W-A BPH1P25356 2167 aa0.7□□□□□ -2.3
YDR170W-AYDR170W-A YDR210WQ03482 75 aa0.69□□□□□ -2.3
YDR170W-AYDR170W-A YMR090WQ04304 227 aaKnown RBP0.69□□□□□ -2.3
YDR170W-AYDR170W-A YIL046W-AQ3E7Z4 54 aa0.69□□□□□ -2.3
YDR170W-AYDR170W-A COX9P07255 59 aa0.68□□□□□ -2.3
YDR170W-AYDR170W-A RPS27AP35997 82 aaKnown RBP0.68□□□□□ -2.3
YDR170W-AYDR170W-A RPS27BP38711 82 aa0.68□□□□□ -2.3
YDR170W-AYDR170W-A MPC2P38857 129 aa0.68□□□□□ -2.3
YDR170W-AYDR170W-A NCE101Q02820 53 aa0.68□□□□□ -2.3
YDR170W-AYDR170W-A COX19Q3E731 98 aa0.68□□□□□ -2.3
YDR170W-AYDR170W-A UBC4P15731 148 aa0.67□□□□□ -2.3
YDR170W-AYDR170W-A TIM12P32830 109 aa0.67□□□□□ -2.3
YDR170W-AYDR170W-A COX12Q01519 83 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms