RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeastyeast

Gene CAF20, Length 486 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF20YOR276W YJR128WP47162 119 aa1.33□□□□□ -2.2
CAF20YOR276W RPL43AP0CX25 92 aaKnown RBP1.32□□□□□ -2.2
CAF20YOR276W RPL43BP0CX26 92 aa1.32□□□□□ -2.2
CAF20YOR276W YHR138CP38841 114 aaPredicted RBP1.32□□□□□ -2.2
CAF20YOR276W LSM6Q06406 86 aaKnown RBP1.32□□□□□ -2.2
CAF20YOR276W SEC16P48415 2195 aaKnown RBP1.32□□□□□ -2.2
CAF20YOR276W BPT1P14772 1559 aa1.31□□□□□ -2.2
CAF20YOR276W CCW14O13547 238 aa1.29□□□□□ -2.2
CAF20YOR276W MIX14Q04341 121 aa1.28□□□□□ -2.2
CAF20YOR276W YOL118CQ08259 102 aa1.28□□□□□ -2.2
CAF20YOR276W TOP2P06786 1428 aaKnown RBP1.28□□□□□ -2.2
CAF20YOR276W GEA2P39993 1459 aaKnown RBP1.27□□□□□ -2.21
CAF20YOR276W YLR255CO13574 117 aa1.27□□□□□ -2.21
CAF20YOR276W YDR210WQ03482 75 aa1.27□□□□□ -2.21
CAF20YOR276W KSH1Q8TGJ3 72 aa1.27□□□□□ -2.21
CAF20YOR276W MYO1P08964 1928 aa1.27□□□□□ -2.21
CAF20YOR276W REV3P14284 1504 aa1.26□□□□□ -2.21
CAF20YOR276W IMP2P46972 177 aa1.26□□□□□ -2.21
CAF20YOR276W YLR307C-AQ3E825 87 aa1.26□□□□□ -2.21
CAF20YOR276W URA2P07259 2214 aaKnown RBP1.25□□□□□ -2.21
CAF20YOR276W SRB6P32570 121 aa1.25□□□□□ -2.21
CAF20YOR276W TY4B-HP0C2J7 1802 aa1.24□□□□□ -2.21
CAF20YOR276W YLR157W-EP0CF00 54 aa1.24□□□□□ -2.21
CAF20YOR276W RSM19P53733 91 aaPredicted RBP1.23□□□□□ -2.21
CAF20YOR276W PAU5P43575 122 aa1.22□□□□□ -2.21
CAF20YOR276W YPL225WQ08971 146 aaKnown RBP1.22□□□□□ -2.21
CAF20YOR276W CAT8P39113 1433 aa1.22□□□□□ -2.21
CAF20YOR276W NTE1Q04958 1679 aa1.21□□□□□ -2.22
CAF20YOR276W AUA1P32450 94 aa1.21□□□□□ -2.22
CAF20YOR276W ZEO1Q08245 113 aa1.21□□□□□ -2.22
CAF20YOR276W BNI1P41832 1953 aa1.21□□□□□ -2.22
CAF20YOR276W RPA190P10964 1664 aaKnown RBP1.2□□□□□ -2.22
CAF20YOR276W YIL086CP40503 102 aa1.2□□□□□ -2.22
CAF20YOR276W YCR095W-AQ3E787 52 aa1.2□□□□□ -2.22
CAF20YOR276W YPL038W-AQ3E7B4 63 aa1.2□□□□□ -2.22
CAF20YOR276W ROX3P25046 220 aa1.19□□□□□ -2.22
CAF20YOR276W YOR289WQ12012 251 aaPredicted RBP1.19□□□□□ -2.22
CAF20YOR276W YHL005CP38752 130 aa1.18□□□□□ -2.22
CAF20YOR276W YRF1-1P0CX20 1796 aa1.18□□□□□ -2.22
CAF20YOR276W YRF1-5P0CX21 1796 aa1.18□□□□□ -2.22
CAF20YOR276W YRF1-8P0CX22 1796 aa1.18□□□□□ -2.22
CAF20YOR276W SHU1P38751 150 aa1.17□□□□□ -2.22
CAF20YOR276W GCV3P39726 170 aaPredicted RBP1.17□□□□□ -2.22
CAF20YOR276W RRT15Q3E811 62 aa1.17□□□□□ -2.22
CAF20YOR276W SRB8P25648 1427 aa1.16□□□□□ -2.22
CAF20YOR276W COX12Q01519 83 aa1.16□□□□□ -2.22
CAF20YOR276W COX19Q3E731 98 aa1.16□□□□□ -2.22
CAF20YOR276W BRR2P32639 2163 aaKnown RBP1.15□□□□□ -2.22
CAF20YOR276W HMRA1P0CY11 126 aa1.15□□□□□ -2.23
CAF20YOR276W RSF2P46974 1380 aa1.15□□□□□ -2.23
CAF20YOR276W POL2P21951 2222 aaKnown RBP1.15□□□□□ -2.23
CAF20YOR276W PAU6P0CE90 120 aa1.14□□□□□ -2.23
CAF20YOR276W PAU18P0CE91 120 aa1.14□□□□□ -2.23
CAF20YOR276W SNA2P56508 79 aa1.14□□□□□ -2.23
CAF20YOR276W MPC2P38857 129 aa1.13□□□□□ -2.23
CAF20YOR276W MRX7P53869 86 aa1.13□□□□□ -2.23
CAF20YOR276W PDR10P51533 1564 aa1.13□□□□□ -2.23
CAF20YOR276W EMC5P40540 141 aa1.12□□□□□ -2.23
CAF20YOR276W YBR072C-AQ3E794 53 aa1.12□□□□□ -2.23
CAF20YOR276W SSN2P38931 1420 aa1.12□□□□□ -2.23
CAF20YOR276W SNF2P22082 1703 aa1.12□□□□□ -2.23
CAF20YOR276W YBL071CP38185 102 aa1.11□□□□□ -2.23
CAF20YOR276W YHR173CP38864 112 aa1.11□□□□□ -2.23
CAF20YOR276W MSL1P40567 111 aaPredicted RBP1.11□□□□□ -2.23
CAF20YOR276W YDR010CQ12426 110 aa1.11□□□□□ -2.23
CAF20YOR276W MRPL38P35996 138 aaPredicted RBP1.1□□□□□ -2.23
CAF20YOR276W YNR034W-AQ3E841 98 aa1.1□□□□□ -2.23
CAF20YOR276W MRP17P28778 131 aa1.09□□□□□ -2.23
CAF20YOR276W ICY1Q04329 127 aa1.09□□□□□ -2.23
CAF20YOR276W RIM15P43565 1770 aa1.08□□□□□ -2.24
CAF20YOR276W YRF1-2P40105 1681 aa1.07□□□□□ -2.24
CAF20YOR276W SPC1P46965 94 aa1.07□□□□□ -2.24
CAF20YOR276W NHP10Q03435 203 aa1.07□□□□□ -2.24
CAF20YOR276W YBR292CP38357 123 aa1.06□□□□□ -2.24
CAF20YOR276W AIM19P40502 157 aa1.06□□□□□ -2.24
CAF20YOR276W YDR029WQ12111 104 aa1.06□□□□□ -2.24
CAF20YOR276W YCR075W-AQ3E830 75 aa1.06□□□□□ -2.24
CAF20YOR276W TY1B-BLQ12490 1755 aa1.06□□□□□ -2.24
CAF20YOR276W RPS11AP0CX47 156 aaKnown RBP1.05□□□□□ -2.24
CAF20YOR276W RPS11BP0CX48 156 aaKnown RBP1.05□□□□□ -2.24
CAF20YOR276W BLM10P43583 2143 aa1.05□□□□□ -2.24
CAF20YOR276W YDR042CQ03205 200 aa1.05□□□□□ -2.24
CAF20YOR276W FAS2P19097 1887 aaKnown RBP1.04□□□□□ -2.24
CAF20YOR276W RSM18P40033 138 aa1.04□□□□□ -2.24
CAF20YOR276W PAU20Q08322 120 aa1.04□□□□□ -2.24
CAF20YOR276W YCL001W-BQ96VH2 84 aa1.03□□□□□ -2.24
CAF20YOR276W TY1B-BRQ12193 1756 aa1.03□□□□□ -2.24
CAF20YOR276W PAU1P0CE88 120 aa1.02□□□□□ -2.25
CAF20YOR276W PAU14P0CE89 120 aa1.02□□□□□ -2.25
CAF20YOR276W PAU8P0CE92 120 aa1.02□□□□□ -2.25
CAF20YOR276W PAU11P0CE93 120 aa1.02□□□□□ -2.25
CAF20YOR276W PAU13P38725 120 aa1.02□□□□□ -2.25
CAF20YOR276W PAU10Q03050 120 aa1.02□□□□□ -2.25
CAF20YOR276W GDB1Q06625 1536 aa1.02□□□□□ -2.25
CAF20YOR276W PAU9Q3E770 120 aa1.02□□□□□ -2.25
CAF20YOR276W SUS1Q6WNK7 96 aa1.02□□□□□ -2.25
CAF20YOR276W SWR1Q05471 1514 aa1.01□□□□□ -2.25
CAF20YOR276W POL1P13382 1468 aa1.01□□□□□ -2.25
CAF20YOR276W YMR082CQ04276 118 aa1.01□□□□□ -2.25
CAF20YOR276W PRP8P33334 2413 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms