RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C RAD50P12753 1312 aa-0.28□□□□□ -2.45
RFX1YLR176C PAU19P0CE85 124 aa-0.28□□□□□ -2.45
RFX1YLR176C PAU3P25610 124 aa-0.28□□□□□ -2.45
RFX1YLR176C MPC2P38857 129 aa-0.28□□□□□ -2.45
RFX1YLR176C RPB11P38902 120 aa-0.28□□□□□ -2.45
RFX1YLR176C AIM11P87275 137 aa-0.28□□□□□ -2.45
RFX1YLR176C RPO41P13433 1351 aaKnown RBP-0.29□□□□□ -2.46
RFX1YLR176C RPS11AP0CX47 156 aaKnown RBP-0.29□□□□□ -2.46
RFX1YLR176C RPS11BP0CX48 156 aaKnown RBP-0.29□□□□□ -2.46
RFX1YLR176C GTT1P40582 234 aa-0.29□□□□□ -2.46
RFX1YLR176C PAM16P42949 149 aa-0.29□□□□□ -2.46
RFX1YLR176C RIM15P43565 1770 aa-0.29□□□□□ -2.46
RFX1YLR176C YOL118CQ08259 102 aa-0.29□□□□□ -2.46
RFX1YLR176C YLR099W-AQ3E798 87 aa-0.29□□□□□ -2.46
RFX1YLR176C YAR029WP39549 74 aa-0.3□□□□□ -2.46
RFX1YLR176C YLR365WQ7LIF2 110 aa-0.3□□□□□ -2.46
RFX1YLR176C ATX1P38636 73 aa-0.31□□□□□ -2.46
RFX1YLR176C RUB1Q03919 77 aa-0.31□□□□□ -2.46
RFX1YLR176C VMA7P39111 118 aa-0.32□□□□□ -2.46
RFX1YLR176C SEN1Q00416 2231 aaKnown RBP-0.32□□□□□ -2.46
RFX1YLR176C SPC2Q04969 178 aa-0.32□□□□□ -2.46
RFX1YLR176C YPL038W-AQ3E7B4 63 aa-0.32□□□□□ -2.46
RFX1YLR176C YCR101CP25607 182 aa-0.33□□□□□ -2.46
RFX1YLR176C YHR138CP38841 114 aaPredicted RBP-0.33□□□□□ -2.46
RFX1YLR176C YNL198CP40166 100 aa-0.33□□□□□ -2.46
RFX1YLR176C PAU15P40585 124 aa-0.34□□□□□ -2.46
RFX1YLR176C YLR419WQ06698 1435 aaKnown RBP-0.34□□□□□ -2.46
RFX1YLR176C YGR164WP53291 111 aa-0.34□□□□□ -2.46
RFX1YLR176C PAU16P35994 123 aa-0.35□□□□□ -2.46
RFX1YLR176C YBR016WP38216 128 aa-0.35□□□□□ -2.46
RFX1YLR176C YLR042CQ07990 161 aa-0.35□□□□□ -2.46
RFX1YLR176C YRF1-2P40105 1681 aa-0.36□□□□□ -2.47
RFX1YLR176C MRPL38P35996 138 aaPredicted RBP-0.36□□□□□ -2.47
RFX1YLR176C HUR1P45820 110 aa-0.36□□□□□ -2.47
RFX1YLR176C COX12Q01519 83 aa-0.36□□□□□ -2.47
RFX1YLR176C BPH1P25356 2167 aa-0.36□□□□□ -2.47
RFX1YLR176C YFR009W-AP0C5M9 85 aa-0.36□□□□□ -2.47
RFX1YLR176C RTR2Q12378 196 aa-0.36□□□□□ -2.47
RFX1YLR176C TY1B-BLQ12490 1755 aa-0.37□□□□□ -2.47
RFX1YLR176C BUD23P25627 275 aaPredicted RBP-0.37□□□□□ -2.47
RFX1YLR176C MRX7P53869 86 aa-0.37□□□□□ -2.47
RFX1YLR176C SSN2P38931 1420 aa-0.38□□□□□ -2.47
RFX1YLR176C RPC10P40422 70 aa-0.38□□□□□ -2.47
RFX1YLR176C IRA2P19158 3079 aa-0.38□□□□□ -2.47
RFX1YLR176C VMA21P41806 77 aa-0.38□□□□□ -2.47
RFX1YLR176C ICY1Q04329 127 aa-0.38□□□□□ -2.47
RFX1YLR176C SGF11Q03067 99 aa-0.39□□□□□ -2.47
RFX1YLR176C SRB6P32570 121 aa-0.4□□□□□ -2.47
RFX1YLR176C YBR292CP38357 123 aa-0.4□□□□□ -2.47
RFX1YLR176C APS2Q00381 147 aa-0.4□□□□□ -2.47
RFX1YLR176C YIR021W-AQ3E739 70 aa-0.4□□□□□ -2.47
RFX1YLR176C SRB8P25648 1427 aa-0.4□□□□□ -2.47
RFX1YLR176C SWC7Q06707 132 aa-0.4□□□□□ -2.47
RFX1YLR176C CAT8P39113 1433 aa-0.41□□□□□ -2.47
RFX1YLR176C IRA1P18963 3092 aa-0.41□□□□□ -2.48
RFX1YLR176C RSM18P40033 138 aa-0.42□□□□□ -2.48
RFX1YLR176C YHR050W-AQ05451 56 aa-0.42□□□□□ -2.48
RFX1YLR176C YCR095W-AQ3E787 52 aa-0.42□□□□□ -2.48
RFX1YLR176C BPT1P14772 1559 aa-0.43□□□□□ -2.48
RFX1YLR176C THO2P53552 1597 aaKnown RBP-0.43□□□□□ -2.48
RFX1YLR176C RPO21P04050 1733 aaKnown RBP-0.43□□□□□ -2.48
RFX1YLR176C NTE1Q04958 1679 aa-0.44□□□□□ -2.48
RFX1YLR176C PAU6P0CE90 120 aa-0.44□□□□□ -2.48
RFX1YLR176C PAU18P0CE91 120 aa-0.44□□□□□ -2.48
RFX1YLR176C WIP1Q2V2P8 89 aa-0.44□□□□□ -2.48
RFX1YLR176C MRP17P28778 131 aa-0.44□□□□□ -2.48
RFX1YLR176C SNA2P56508 79 aa-0.44□□□□□ -2.48
RFX1YLR176C YNR034W-AQ3E841 98 aa-0.44□□□□□ -2.48
RFX1YLR176C LYS2P07702 1392 aa-0.44□□□□□ -2.48
RFX1YLR176C PAU20Q08322 120 aa-0.45□□□□□ -2.48
RFX1YLR176C MIC10Q96VH5 97 aa-0.45□□□□□ -2.48
RFX1YLR176C KRE5P22023 1365 aa-0.45□□□□□ -2.48
RFX1YLR176C RSF2P46974 1380 aa-0.45□□□□□ -2.48
RFX1YLR176C YJR107C-AP0CT86 78 aa-0.45□□□□□ -2.48
RFX1YLR176C YER039C-AP0CD97 72 aa-0.46□□□□□ -2.48
RFX1YLR176C YOS1Q3E834 85 aa-0.46□□□□□ -2.48
RFX1YLR176C YIL134C-AQ45U18 67 aa-0.46□□□□□ -2.48
RFX1YLR176C YMR105W-AQ8TGS8 64 aa-0.46□□□□□ -2.48
RFX1YLR176C YRF1-1P0CX20 1796 aa-0.46□□□□□ -2.48
RFX1YLR176C YRF1-5P0CX21 1796 aa-0.46□□□□□ -2.48
RFX1YLR176C YRF1-8P0CX22 1796 aa-0.46□□□□□ -2.48
RFX1YLR176C PAU5P43575 122 aa-0.47□□□□□ -2.48
RFX1YLR176C SPP41P38904 1435 aa-0.47□□□□□ -2.48
RFX1YLR176C RPL38P49167 78 aaKnown RBP-0.47□□□□□ -2.49
RFX1YLR176C YBL071CP38185 102 aa-0.48□□□□□ -2.49
RFX1YLR176C TRA1P38811 3744 aa-0.48□□□□□ -2.49
RFX1YLR176C PDR10P51533 1564 aa-0.48□□□□□ -2.49
RFX1YLR176C ROX3P25046 220 aa-0.48□□□□□ -2.49
RFX1YLR176C AIM19P40502 157 aa-0.49□□□□□ -2.49
RFX1YLR176C BUD4P47136 1447 aa-0.5□□□□□ -2.49
RFX1YLR176C UBC4P15731 148 aa-0.5□□□□□ -2.49
RFX1YLR176C GNA1P43577 159 aaPredicted RBP-0.5□□□□□ -2.49
RFX1YLR176C XRN1P22147 1528 aaKnown RBP-0.51□□□□□ -2.49
RFX1YLR176C PAU1P0CE88 120 aa-0.51□□□□□ -2.49
RFX1YLR176C PAU14P0CE89 120 aa-0.51□□□□□ -2.49
RFX1YLR176C PAU8P0CE92 120 aa-0.51□□□□□ -2.49
RFX1YLR176C PAU11P0CE93 120 aa-0.51□□□□□ -2.49
RFX1YLR176C PDX3P38075 228 aaKnown RBP-0.51□□□□□ -2.49
RFX1YLR176C PAU13P38725 120 aa-0.51□□□□□ -2.49
RFX1YLR176C PAU10Q03050 120 aa-0.51□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms