RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W YGL041C-BQ3E750 60 aa1.28□□□□□ -2.2
CBF2YGR140W GDB1Q06625 1536 aa1.28□□□□□ -2.21
CBF2YGR140W ECM12O13529 151 aa1.27□□□□□ -2.21
CBF2YGR140W SUS1Q6WNK7 96 aa1.27□□□□□ -2.21
CBF2YGR140W YSF3P0C074 85 aaPredicted RBP1.27□□□□□ -2.21
CBF2YGR140W TY1B-PR2P0C2J0 1756 aa1.27□□□□□ -2.21
CBF2YGR140W AIM4P38305 123 aaPredicted RBP1.26□□□□□ -2.21
CBF2YGR140W BNI1P41832 1953 aa1.26□□□□□ -2.21
CBF2YGR140W YRF1-2P40105 1681 aa1.26□□□□□ -2.21
CBF2YGR140W CDC25P04821 1589 aa1.26□□□□□ -2.21
CBF2YGR140W CCW14O13547 238 aa1.26□□□□□ -2.21
CBF2YGR140W VPS55P47111 140 aa1.26□□□□□ -2.21
CBF2YGR140W YPR203WQ08994 102 aa1.26□□□□□ -2.21
CBF2YGR140W YGL194C-AQ2V2P6 80 aa1.26□□□□□ -2.21
CBF2YGR140W TY4B-JP47024 1803 aa1.26□□□□□ -2.21
CBF2YGR140W HIR3P47171 1648 aa1.25□□□□□ -2.21
CBF2YGR140W YDR042CQ03205 200 aa1.25□□□□□ -2.21
CBF2YGR140W YCF1P39109 1515 aaKnown RBP1.25□□□□□ -2.21
CBF2YGR140W TY1B-NL2Q99337 1749 aaKnown RBP1.25□□□□□ -2.21
CBF2YGR140W GCV3P39726 170 aaPredicted RBP1.25□□□□□ -2.21
CBF2YGR140W RSM18P40033 138 aa1.25□□□□□ -2.21
CBF2YGR140W CYB5P40312 120 aa1.25□□□□□ -2.21
CBF2YGR140W YIL102CP40488 101 aa1.25□□□□□ -2.21
CBF2YGR140W YOL118CQ08259 102 aa1.25□□□□□ -2.21
CBF2YGR140W RKR1Q04781 1562 aa1.24□□□□□ -2.21
CBF2YGR140W HMRA1P0CY11 126 aa1.24□□□□□ -2.21
CBF2YGR140W LSM6Q06406 86 aaKnown RBP1.24□□□□□ -2.21
CBF2YGR140W SCP1Q08873 200 aa1.24□□□□□ -2.21
CBF2YGR140W YGR240C-AQ3E786 66 aa1.24□□□□□ -2.21
CBF2YGR140W CCW12Q12127 133 aa1.24□□□□□ -2.21
CBF2YGR140W YKL068W-AQ3E826 78 aa1.24□□□□□ -2.21
CBF2YGR140W ATG2P53855 1592 aa1.23□□□□□ -2.21
CBF2YGR140W PDR15Q04182 1529 aaKnown RBP1.23□□□□□ -2.21
CBF2YGR140W RPO31P04051 1460 aa1.23□□□□□ -2.21
CBF2YGR140W RPS22AP0C0W1 130 aaKnown RBP1.23□□□□□ -2.21
CBF2YGR140W YLR285C-AQ3E771 56 aa1.23□□□□□ -2.21
CBF2YGR140W RPS22BQ3E7Y3 130 aaKnown RBP1.23□□□□□ -2.21
CBF2YGR140W ENV10Q99382 181 aa1.23□□□□□ -2.21
CBF2YGR140W TY1B-BRQ12193 1756 aa1.23□□□□□ -2.21
CBF2YGR140W DNF2Q12675 1612 aa1.23□□□□□ -2.21
CBF2YGR140W ROX3P25046 220 aa1.23□□□□□ -2.21
CBF2YGR140W SRB8P25648 1427 aa1.23□□□□□ -2.21
CBF2YGR140W HMRA2P0CY13 119 aa1.22□□□□□ -2.21
CBF2YGR140W MRPL31P14063 131 aaPredicted RBP1.22□□□□□ -2.21
CBF2YGR140W RPA12P32529 125 aaKnown RBP1.22□□□□□ -2.21
CBF2YGR140W MGR2Q02889 113 aa1.22□□□□□ -2.21
CBF2YGR140W YBR013CP38215 129 aa1.22□□□□□ -2.21
CBF2YGR140W IMP2P46972 177 aa1.22□□□□□ -2.21
CBF2YGR140W COX12Q01519 83 aa1.22□□□□□ -2.21
CBF2YGR140W YCR095W-AQ3E787 52 aa1.22□□□□□ -2.21
CBF2YGR140W FAB1P34756 2278 aa1.22□□□□□ -2.21
CBF2YGR140W POL1P13382 1468 aa1.22□□□□□ -2.21
CBF2YGR140W YCR001WP25347 104 aa1.22□□□□□ -2.21
CBF2YGR140W YMR175W-AQ3E766 64 aa1.22□□□□□ -2.21
CBF2YGR140W RRT15Q3E811 62 aa1.22□□□□□ -2.21
CBF2YGR140W URB1P34241 1764 aaKnown RBP1.21□□□□□ -2.22
CBF2YGR140W MIC27P50945 234 aa1.21□□□□□ -2.22
CBF2YGR140W YMR007WQ03675 126 aa1.21□□□□□ -2.22
CBF2YGR140W MHF2Q3E829 80 aa1.21□□□□□ -2.22
CBF2YGR140W MYO1P08964 1928 aa1.2□□□□□ -2.22
CBF2YGR140W PAU5P43575 122 aa1.2□□□□□ -2.22
CBF2YGR140W SNA2P56508 79 aa1.2□□□□□ -2.22
CBF2YGR140W CYR1P08678 2026 aaKnown RBP1.2□□□□□ -2.22
CBF2YGR140W YDR210WQ03482 75 aa1.2□□□□□ -2.22
CBF2YGR140W ICY1Q04329 127 aa1.2□□□□□ -2.22
CBF2YGR140W LCL2Q08045 131 aa1.2□□□□□ -2.22
CBF2YGR140W MMS22Q06164 1454 aa1.2□□□□□ -2.22
CBF2YGR140W MRP17P28778 131 aa1.19□□□□□ -2.22
CBF2YGR140W AIM19P40502 157 aa1.19□□□□□ -2.22
CBF2YGR140W AQY2P0CD90 149 aa1.19□□□□□ -2.22
CBF2YGR140W COX19Q3E731 98 aa1.19□□□□□ -2.22
CBF2YGR140W DOP1Q03921 1698 aa1.19□□□□□ -2.22
CBF2YGR140W XRN1P22147 1528 aaKnown RBP1.19□□□□□ -2.22
CBF2YGR140W YPL038W-AQ3E7B4 63 aa1.18□□□□□ -2.22
CBF2YGR140W BUD3P25558 1636 aa1.18□□□□□ -2.22
CBF2YGR140W YOL013W-AP0C272 63 aaPredicted RBP1.18□□□□□ -2.22
CBF2YGR140W YCR085WP25650 117 aa1.18□□□□□ -2.22
CBF2YGR140W MRPS12P53732 153 aa1.18□□□□□ -2.22
CBF2YGR140W YOR343CQ12484 108 aa1.18□□□□□ -2.22
CBF2YGR140W TY1B-GR3Q12316 1755 aa1.18□□□□□ -2.22
CBF2YGR140W TY1B-ORQ92393 1755 aa1.18□□□□□ -2.22
CBF2YGR140W DNF3Q12674 1656 aa1.17□□□□□ -2.22
CBF2YGR140W MRX7P53869 86 aa1.17□□□□□ -2.22
CBF2YGR140W VPS15P22219 1454 aa1.17□□□□□ -2.22
CBF2YGR140W YRF1-1P0CX20 1796 aa1.17□□□□□ -2.22
CBF2YGR140W YRF1-5P0CX21 1796 aa1.17□□□□□ -2.22
CBF2YGR140W YRF1-8P0CX22 1796 aa1.17□□□□□ -2.22
CBF2YGR140W TOM6P33448 61 aa1.17□□□□□ -2.22
CBF2YGR140W SPO14P36126 1683 aa1.16□□□□□ -2.22
CBF2YGR140W MRPL38P35996 138 aaPredicted RBP1.16□□□□□ -2.22
CBF2YGR140W YBL071CP38185 102 aa1.16□□□□□ -2.22
CBF2YGR140W NUP159P40477 1460 aa1.16□□□□□ -2.22
CBF2YGR140W MLP1Q02455 1875 aaKnown RBP1.16□□□□□ -2.22
CBF2YGR140W POC4Q12245 148 aaPredicted RBP1.16□□□□□ -2.22
CBF2YGR140W HUG1Q6Q5K6 68 aa1.16□□□□□ -2.22
CBF2YGR140W UFD4P33202 1483 aa1.15□□□□□ -2.22
CBF2YGR140W SLH1P53327 1967 aaKnown RBP1.15□□□□□ -2.22
CBF2YGR140W YBR292CP38357 123 aa1.15□□□□□ -2.22
CBF2YGR140W HUA1P40325 198 aa1.15□□□□□ -2.22
CBF2YGR140W YIL086CP40503 102 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms