RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W YHL018WP38744 120 aaPredicted RBP4.38□□□□□ -1.71
TRP1YDR007W YNL217WP40152 326 aa4.38□□□□□ -1.71
TRP1YDR007W HST4P53688 370 aa4.38□□□□□ -1.71
TRP1YDR007W YMR320WQ04897 101 aa4.38□□□□□ -1.71
TRP1YDR007W YPS3Q12303 508 aa4.38□□□□□ -1.71
TRP1YDR007W YHR139C-AO13536 103 aa4.37□□□□□ -1.71
TRP1YDR007W RPL2AP0CX45 254 aaKnown RBP4.37□□□□□ -1.71
TRP1YDR007W RPL2BP0CX46 254 aaKnown RBP4.37□□□□□ -1.71
TRP1YDR007W FZF1P32805 299 aa4.37□□□□□ -1.71
TRP1YDR007W YHR140WP38842 239 aa4.37□□□□□ -1.71
TRP1YDR007W YHR173CP38864 112 aa4.37□□□□□ -1.71
TRP1YDR007W YGR050CP53231 118 aa4.37□□□□□ -1.71
TRP1YDR007W PET191Q02772 108 aa4.37□□□□□ -1.71
TRP1YDR007W YNL277W-AQ3E7Z0 62 aa4.37□□□□□ -1.71
TRP1YDR007W HUG1Q6Q5K6 68 aa4.37□□□□□ -1.71
TRP1YDR007W HSP12P22943 109 aaKnown RBP4.36□□□□□ -1.71
TRP1YDR007W FIP1P45976 327 aa4.36□□□□□ -1.71
TRP1YDR007W MMS2P53152 137 aa4.36□□□□□ -1.71
TRP1YDR007W GPI19Q04082 140 aa4.36□□□□□ -1.71
TRP1YDR007W SPG4Q04438 115 aa4.36□□□□□ -1.71
TRP1YDR007W Q0255P03881 472 aa4.35□□□□□ -1.71
TRP1YDR007W MRPL39P36533 70 aa4.35□□□□□ -1.71
TRP1YDR007W YBL081WP38180 368 aaKnown RBP4.35□□□□□ -1.71
TRP1YDR007W SMD1Q02260 146 aaPredicted RBP4.35□□□□□ -1.71
TRP1YDR007W YDR102CQ03864 110 aa4.35□□□□□ -1.71
TRP1YDR007W MSA1Q08471 629 aa4.35□□□□□ -1.71
TRP1YDR007W MRPL31P14063 131 aaPredicted RBP4.34□□□□□ -1.71
TRP1YDR007W LST8P41318 303 aa4.34□□□□□ -1.71
TRP1YDR007W SFT2P38166 215 aa4.33□□□□□ -1.72
TRP1YDR007W SFT1P43682 97 aa4.33□□□□□ -1.72
TRP1YDR007W CIS3P47001 227 aa4.33□□□□□ -1.72
TRP1YDR007W VPS55P47111 140 aa4.33□□□□□ -1.72
TRP1YDR007W KSH1Q8TGJ3 72 aa4.33□□□□□ -1.72
TRP1YDR007W RSM19P53733 91 aaPredicted RBP4.32□□□□□ -1.72
TRP1YDR007W PIR1Q03178 341 aa4.32□□□□□ -1.72
TRP1YDR007W IGO2Q9P305 131 aa4.32□□□□□ -1.72
TRP1YDR007W TOM1Q03280 3268 aa4.32□□□□□ -1.72
TRP1YDR007W BET1P22804 142 aa4.31□□□□□ -1.72
TRP1YDR007W YHR180WP38868 163 aa4.31□□□□□ -1.72
TRP1YDR007W YNL046WP53956 172 aa4.31□□□□□ -1.72
TRP1YDR007W EMC6Q12431 108 aa4.31□□□□□ -1.72
TRP1YDR007W YBL008W-AQ3E821 79 aa4.31□□□□□ -1.72
TRP1YDR007W RPL28P02406 149 aaKnown RBP4.3□□□□□ -1.72
TRP1YDR007W TOM40P23644 387 aaKnown RBP4.3□□□□□ -1.72
TRP1YDR007W ROX3P25046 220 aa4.3□□□□□ -1.72
TRP1YDR007W YSY6P38374 65 aa4.3□□□□□ -1.72
TRP1YDR007W DSE2P38844 325 aa4.3□□□□□ -1.72
TRP1YDR007W YGR219WP53307 113 aa4.3□□□□□ -1.72
TRP1YDR007W GIS2P53849 153 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
TRP1YDR007W YPL261CQ08976 102 aa4.3□□□□□ -1.72
TRP1YDR007W YDR381C-AQ3E6R5 114 aa4.3□□□□□ -1.72
TRP1YDR007W UBC4P15731 148 aa4.29□□□□□ -1.72
TRP1YDR007W FPR2P32472 135 aa4.29□□□□□ -1.72
TRP1YDR007W YAR029WP39549 74 aa4.29□□□□□ -1.72
TRP1YDR007W YFL051CP43552 160 aa4.29□□□□□ -1.72
TRP1YDR007W MDM35O60200 86 aa4.28□□□□□ -1.72
TRP1YDR007W YRA2P36036 203 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
TRP1YDR007W MGR2Q02889 113 aa4.28□□□□□ -1.72
TRP1YDR007W FIT2Q08906 153 aa4.28□□□□□ -1.72
TRP1YDR007W YOR343CQ12484 108 aa4.28□□□□□ -1.72
TRP1YDR007W YGL258W-AQ3E740 77 aa4.28□□□□□ -1.72
TRP1YDR007W YMR175W-AQ3E766 64 aa4.28□□□□□ -1.72
TRP1YDR007W RPL30P14120 105 aaKnown RBP4.27□□□□□ -1.73
TRP1YDR007W AIM19P40502 157 aa4.27□□□□□ -1.73
TRP1YDR007W YNR077CP53758 84 aa4.27□□□□□ -1.73
TRP1YDR007W HSK3P69852 69 aa4.27□□□□□ -1.73
TRP1YDR007W MIX14Q04341 121 aa4.27□□□□□ -1.73
TRP1YDR007W IRC19Q07843 230 aa4.27□□□□□ -1.73
TRP1YDR007W PFY1P07274 126 aa4.26□□□□□ -1.73
TRP1YDR007W TVP23P38962 199 aa4.26□□□□□ -1.73
TRP1YDR007W YGL034CP53186 121 aa4.26□□□□□ -1.73
TRP1YDR007W IRC23Q08416 157 aa4.26□□□□□ -1.73
TRP1YDR007W YER187WP40102 141 aa4.25□□□□□ -1.73
TRP1YDR007W NCE101Q02820 53 aa4.25□□□□□ -1.73
TRP1YDR007W YLR194CQ05777 254 aa4.25□□□□□ -1.73
TRP1YDR007W TIM22Q12328 207 aa4.25□□□□□ -1.73
TRP1YDR007W MED6P38782 295 aa4.24□□□□□ -1.73
TRP1YDR007W MPC2P38857 129 aa4.24□□□□□ -1.73
TRP1YDR007W CTR2P38865 189 aa4.24□□□□□ -1.73
TRP1YDR007W YEL067CP39978 195 aa4.24□□□□□ -1.73
TRP1YDR007W TOS6P48560 102 aa4.24□□□□□ -1.73
TRP1YDR007W TOM7P53507 60 aa4.24□□□□□ -1.73
TRP1YDR007W HMRA2P0CY13 119 aa4.23□□□□□ -1.73
TRP1YDR007W DCV1P43595 202 aa4.23□□□□□ -1.73
TRP1YDR007W YFR054CP43622 192 aa4.23□□□□□ -1.73
TRP1YDR007W DAD4P69851 72 aa4.23□□□□□ -1.73
TRP1YDR007W YDR524C-BQ3E6R4 66 aa4.23□□□□□ -1.73
TRP1YDR007W YHR214C-EQ8TGK0 99 aa4.23□□□□□ -1.73
TRP1YDR007W CCW14O13547 238 aa4.22□□□□□ -1.73
TRP1YDR007W YKR032WP36127 104 aa4.22□□□□□ -1.73
TRP1YDR007W ECO1P43605 281 aa4.22□□□□□ -1.73
TRP1YDR007W NIP7Q08962 181 aaKnown RBP4.22□□□□□ -1.73
TRP1YDR007W YHP1Q04116 353 aa4.21□□□□□ -1.74
TRP1YDR007W YOL118CQ08259 102 aa4.21□□□□□ -1.74
TRP1YDR007W YOR192C-CQ3E736 78 aa4.21□□□□□ -1.74
TRP1YDR007W COA3Q3E7B2 85 aa4.21□□□□□ -1.74
TRP1YDR007W YHR022CP38763 256 aa4.2□□□□□ -1.74
TRP1YDR007W SPI1P40092 148 aa4.2□□□□□ -1.74
TRP1YDR007W TOS8P53147 276 aa4.2□□□□□ -1.74
TRP1YDR007W VPS68Q12016 184 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms