RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C YPR064WQ12492 139 aa3.63□□□□□ -1.83
GDE1YPL110C YCR025CP25352 136 aa3.63□□□□□ -1.83
GDE1YPL110C YBL081WP38180 368 aaKnown RBP3.63□□□□□ -1.83
GDE1YPL110C YNL234WP53857 426 aa3.63□□□□□ -1.83
GDE1YPL110C AGA2P32781 87 aa3.62□□□□□ -1.83
GDE1YPL110C YOR105WQ08504 108 aa3.62□□□□□ -1.83
GDE1YPL110C YHR139C-AO13536 103 aa3.62□□□□□ -1.83
GDE1YPL110C RPL32P38061 130 aaKnown RBP3.62□□□□□ -1.83
GDE1YPL110C TSC3Q3E790 80 aa3.62□□□□□ -1.83
GDE1YPL110C MIC10Q96VH5 97 aa3.62□□□□□ -1.83
GDE1YPL110C YHR213WP0CI67 198 aa3.62□□□□□ -1.83
GDE1YPL110C SWD3P38123 315 aa3.62□□□□□ -1.83
GDE1YPL110C YFR035CP43608 114 aa3.62□□□□□ -1.83
GDE1YPL110C NIP7Q08962 181 aaKnown RBP3.62□□□□□ -1.83
GDE1YPL110C TDA8Q6B2U8 126 aa3.62□□□□□ -1.83
GDE1YPL110C YER175W-AQ8TGU4 54 aa3.62□□□□□ -1.83
GDE1YPL110C EMC6Q12431 108 aa3.61□□□□□ -1.83
GDE1YPL110C YHR214C-EQ8TGK0 99 aa3.61□□□□□ -1.83
GDE1YPL110C SPO13P23624 291 aa3.61□□□□□ -1.83
GDE1YPL110C RPL16AP26784 199 aaKnown RBP3.61□□□□□ -1.83
GDE1YPL110C MST27P53176 234 aa3.61□□□□□ -1.83
GDE1YPL110C LSM6Q06406 86 aaKnown RBP3.61□□□□□ -1.83
GDE1YPL110C UBC13P52490 153 aa3.6□□□□□ -1.83
GDE1YPL110C SOD1P00445 154 aaKnown RBP3.6□□□□□ -1.83
GDE1YPL110C BET1P22804 142 aa3.6□□□□□ -1.83
GDE1YPL110C VPS55P47111 140 aa3.6□□□□□ -1.83
GDE1YPL110C YGR018CP53211 109 aa3.6□□□□□ -1.83
GDE1YPL110C YLR112WQ12130 139 aa3.6□□□□□ -1.83
GDE1YPL110C YER181CP40097 107 aa3.6□□□□□ -1.83
GDE1YPL110C HHF1P02309 103 aaKnown RBP3.59□□□□□ -1.83
GDE1YPL110C ECO1P43605 281 aa3.59□□□□□ -1.83
GDE1YPL110C TIM17P39515 158 aa3.59□□□□□ -1.83
GDE1YPL110C TOS8P53147 276 aa3.59□□□□□ -1.83
GDE1YPL110C YPR096CO13587 100 aa3.59□□□□□ -1.84
GDE1YPL110C ERG4P25340 473 aa3.59□□□□□ -1.84
GDE1YPL110C YKR045CP36138 183 aa3.59□□□□□ -1.84
GDE1YPL110C YHR180WP38868 163 aa3.59□□□□□ -1.84
GDE1YPL110C YGL034CP53186 121 aa3.59□□□□□ -1.84
GDE1YPL110C PET191Q02772 108 aa3.59□□□□□ -1.84
GDE1YPL110C COA2Q3E823 68 aa3.59□□□□□ -1.84
GDE1YPL110C MRPL31P14063 131 aaPredicted RBP3.58□□□□□ -1.84
GDE1YPL110C RPB9P27999 122 aa3.58□□□□□ -1.84
GDE1YPL110C SRX1P36077 127 aa3.58□□□□□ -1.84
GDE1YPL110C YNL200CP40165 246 aaKnown RBP3.58□□□□□ -1.84
GDE1YPL110C YDL211CQ12121 372 aa3.58□□□□□ -1.84
GDE1YPL110C RRT15Q3E811 62 aa3.58□□□□□ -1.84
GDE1YPL110C APS1P35181 156 aa3.58□□□□□ -1.84
GDE1YPL110C RPP1P38786 293 aa3.58□□□□□ -1.84
GDE1YPL110C SIM1P40472 476 aa3.58□□□□□ -1.84
GDE1YPL110C BOL2P53082 120 aa3.58□□□□□ -1.84
GDE1YPL110C MCH4Q08268 501 aa3.58□□□□□ -1.84
GDE1YPL110C RPL16BP26785 198 aaKnown RBP3.57□□□□□ -1.84
GDE1YPL110C IMP1P28627 190 aa3.57□□□□□ -1.84
GDE1YPL110C YIL014C-AQ02598 104 aa3.57□□□□□ -1.84
GDE1YPL110C PIR1Q03178 341 aa3.57□□□□□ -1.84
GDE1YPL110C YDL009CQ12210 107 aa3.57□□□□□ -1.84
GDE1YPL110C YDR461C-AQ2V2P7 80 aa3.57□□□□□ -1.84
GDE1YPL110C YDR246W-AQ3E763 66 aa3.57□□□□□ -1.84
GDE1YPL110C TOM1Q03280 3268 aa3.57□□□□□ -1.84
GDE1YPL110C YEL045CP32616 141 aa3.57□□□□□ -1.84
GDE1YPL110C CRH1P53301 507 aa3.57□□□□□ -1.84
GDE1YPL110C YDR102CQ03864 110 aa3.57□□□□□ -1.84
GDE1YPL110C ROX3P25046 220 aa3.56□□□□□ -1.84
GDE1YPL110C YER187WP40102 141 aa3.56□□□□□ -1.84
GDE1YPL110C YPS5P53057 165 aa3.56□□□□□ -1.84
GDE1YPL110C NAG1Q8TGN9 163 aa3.56□□□□□ -1.84
GDE1YPL110C SAP30P38429 201 aa3.56□□□□□ -1.84
GDE1YPL110C YHL005CP38752 130 aa3.56□□□□□ -1.84
GDE1YPL110C AIM19P40502 157 aa3.56□□□□□ -1.84
GDE1YPL110C LDB16P25587 256 aa3.56□□□□□ -1.84
GDE1YPL110C YOR186WQ08560 144 aa3.56□□□□□ -1.84
GDE1YPL110C NPC2Q12408 173 aa3.56□□□□□ -1.84
GDE1YPL110C YML100W-AQ8TGT0 57 aa3.56□□□□□ -1.84
GDE1YPL110C SPS100P13130 326 aa3.55□□□□□ -1.84
GDE1YPL110C SPI1P40092 148 aa3.55□□□□□ -1.84
GDE1YPL110C SPG1P50088 95 aa3.55□□□□□ -1.84
GDE1YPL110C IRC23Q08416 157 aa3.55□□□□□ -1.84
GDE1YPL110C YLR365WQ7LIF2 110 aa3.55□□□□□ -1.84
GDE1YPL110C PIS1P06197 220 aaKnown RBP3.55□□□□□ -1.84
GDE1YPL110C RPL42AP0CX27 106 aaKnown RBP3.55□□□□□ -1.84
GDE1YPL110C RPL42BP0CX28 106 aaKnown RBP3.55□□□□□ -1.84
GDE1YPL110C ARF1P11076 181 aaKnown RBP3.55□□□□□ -1.84
GDE1YPL110C FUN19P28003 413 aaPredicted RBP3.55□□□□□ -1.84
GDE1YPL110C CSE2P33308 149 aa3.55□□□□□ -1.84
GDE1YPL110C YRA2P36036 203 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
GDE1YPL110C HUR1P45820 110 aa3.55□□□□□ -1.84
GDE1YPL110C SWS2P53937 143 aa3.55□□□□□ -1.84
GDE1YPL110C ICY1Q04329 127 aa3.55□□□□□ -1.84
GDE1YPL110C SMT3Q12306 101 aaKnown RBP3.55□□□□□ -1.84
GDE1YPL110C RPS8AP0CX39 200 aaKnown RBP3.54□□□□□ -1.84
GDE1YPL110C RPS8BP0CX40 200 aaKnown RBP3.54□□□□□ -1.84
GDE1YPL110C YHR214C-DP0CX93 97 aa3.54□□□□□ -1.84
GDE1YPL110C YFL019CP43576 117 aa3.54□□□□□ -1.84
GDE1YPL110C MRPL39P36533 70 aa3.54□□□□□ -1.84
GDE1YPL110C CTR2P38865 189 aa3.54□□□□□ -1.84
GDE1YPL110C YOR376W-AQ3E805 51 aa3.54□□□□□ -1.84
GDE1YPL110C YMR316C-AI2HB70 103 aa3.54□□□□□ -1.84
GDE1YPL110C HSP12P22943 109 aaKnown RBP3.54□□□□□ -1.84
GDE1YPL110C YSY6P38374 65 aa3.54□□□□□ -1.84
GDE1YPL110C PCP1P53259 346 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms