RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeastyeast

Gene DDI3, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDI3YNL335W TVP18Q04767 167 aa2.48□□□□□ -2.01
DDI3YNL335W UPS1Q05776 175 aa2.48□□□□□ -2.01
DDI3YNL335W MPD1Q12404 318 aaKnown RBP2.48□□□□□ -2.01
DDI3YNL335W YIL046W-AQ3E7Z4 54 aa2.48□□□□□ -2.01
DDI3YNL335W SEC16P48415 2195 aaKnown RBP2.47□□□□□ -2.01
DDI3YNL335W YHR139C-AO13536 103 aa2.47□□□□□ -2.01
DDI3YNL335W PAU16P35994 123 aa2.47□□□□□ -2.01
DDI3YNL335W AME1P38313 324 aa2.47□□□□□ -2.01
DDI3YNL335W SRP14P38985 146 aa2.47□□□□□ -2.01
DDI3YNL335W YER134CP40081 178 aa2.47□□□□□ -2.01
DDI3YNL335W CYB5P40312 120 aa2.47□□□□□ -2.01
DDI3YNL335W YJL027CP47063 138 aaPredicted RBP2.47□□□□□ -2.01
DDI3YNL335W ARP3P47117 449 aaKnown RBP2.47□□□□□ -2.01
DDI3YNL335W DYN2Q02647 92 aa2.47□□□□□ -2.01
DDI3YNL335W YPL067CQ02754 198 aa2.47□□□□□ -2.01
DDI3YNL335W HRD1Q08109 551 aa2.47□□□□□ -2.01
DDI3YNL335W NAT5Q08689 176 aa2.47□□□□□ -2.01
DDI3YNL335W FIT3Q08907 204 aa2.47□□□□□ -2.01
DDI3YNL335W POC4Q12245 148 aaPredicted RBP2.47□□□□□ -2.01
DDI3YNL335W BOL1Q3E793 110 aa2.47□□□□□ -2.01
DDI3YNL335W RPL28P02406 149 aaKnown RBP2.46□□□□□ -2.02
DDI3YNL335W YBR121C-AP0C5L4 52 aa2.46□□□□□ -2.02
DDI3YNL335W HAP3P13434 144 aa2.46□□□□□ -2.02
DDI3YNL335W ROX3P25046 220 aa2.46□□□□□ -2.02
DDI3YNL335W SRP21P32342 167 aa2.46□□□□□ -2.02
DDI3YNL335W YHR138CP38841 114 aaPredicted RBP2.46□□□□□ -2.02
DDI3YNL335W YIL163CP40448 117 aa2.46□□□□□ -2.02
DDI3YNL335W YJR015WP47090 510 aa2.46□□□□□ -2.02
DDI3YNL335W MIC27P50945 234 aa2.46□□□□□ -2.02
DDI3YNL335W YGR219WP53307 113 aa2.46□□□□□ -2.02
DDI3YNL335W SHH3Q04487 196 aa2.46□□□□□ -2.02
DDI3YNL335W CNL1Q06333 122 aa2.46□□□□□ -2.02
DDI3YNL335W PAU23Q07987 124 aa2.46□□□□□ -2.02
DDI3YNL335W CSI2Q08054 341 aa2.46□□□□□ -2.02
DDI3YNL335W YDL180WQ12301 547 aa2.46□□□□□ -2.02
DDI3YNL335W PAU17Q12370 124 aa2.46□□□□□ -2.02
DDI3YNL335W YHR086W-AQ3E746 53 aa2.46□□□□□ -2.02
DDI3YNL335W RPS22BQ3E7Y3 130 aaKnown RBP2.46□□□□□ -2.02
DDI3YNL335W YPR170W-BP0C5R9 85 aa2.45□□□□□ -2.02
DDI3YNL335W YKL102CP34249 101 aa2.45□□□□□ -2.02
DDI3YNL335W PAM17P36147 197 aa2.45□□□□□ -2.02
DDI3YNL335W DOG2P38773 246 aa2.45□□□□□ -2.02
DDI3YNL335W ALG13P53178 202 aa2.45□□□□□ -2.02
DDI3YNL335W HSK3P69852 69 aa2.45□□□□□ -2.02
DDI3YNL335W YDR366CP87287 132 aa2.45□□□□□ -2.02
DDI3YNL335W MRPS8Q03799 155 aa2.45□□□□□ -2.02
DDI3YNL335W YDR391CQ04170 232 aa2.45□□□□□ -2.02
DDI3YNL335W LPP1Q04396 274 aa2.45□□□□□ -2.02
DDI3YNL335W YOL024WQ08172 172 aa2.45□□□□□ -2.02
DDI3YNL335W YOR032W-AQ8TGS1 66 aa2.45□□□□□ -2.02
DDI3YNL335W POL2P21951 2222 aaKnown RBP2.44□□□□□ -2.02
DDI3YNL335W HMRA1P0CY11 126 aa2.44□□□□□ -2.02
DDI3YNL335W GSP1P32835 219 aaKnown RBP2.44□□□□□ -2.02
DDI3YNL335W GSP2P32836 220 aaKnown RBP2.44□□□□□ -2.02
DDI3YNL335W SEC72P39742 193 aaKnown RBP2.44□□□□□ -2.02
DDI3YNL335W ERG28P40030 148 aa2.44□□□□□ -2.02
DDI3YNL335W RUB1Q03919 77 aa2.44□□□□□ -2.02
DDI3YNL335W YHP1Q04116 353 aa2.44□□□□□ -2.02
DDI3YNL335W RAF1Q06891 181 aa2.44□□□□□ -2.02
DDI3YNL335W YPL162CQ12042 273 aa2.44□□□□□ -2.02
DDI3YNL335W YDL157CQ12082 118 aa2.44□□□□□ -2.02
DDI3YNL335W YGL258W-AQ3E740 77 aa2.44□□□□□ -2.02
DDI3YNL335W YKL183C-AQ3E765 70 aa2.44□□□□□ -2.02
DDI3YNL335W HTB1P02293 131 aaKnown RBP2.43□□□□□ -2.02
DDI3YNL335W HTB2P02294 131 aa2.43□□□□□ -2.02
DDI3YNL335W SEC4P07560 215 aaKnown RBP2.43□□□□□ -2.02
DDI3YNL335W HSP12P22943 109 aaKnown RBP2.43□□□□□ -2.02
DDI3YNL335W YBR090CP38253 122 aa2.43□□□□□ -2.02
DDI3YNL335W TDA4P47153 279 aa2.43□□□□□ -2.02
DDI3YNL335W YGL230CP53074 147 aa2.43□□□□□ -2.02
DDI3YNL335W THG1P53215 237 aaKnown RBP2.43□□□□□ -2.02
DDI3YNL335W YNR064CP53750 290 aa2.43□□□□□ -2.02
DDI3YNL335W ATP19P81451 68 aa2.43□□□□□ -2.02
DDI3YNL335W RAV2Q03956 351 aa2.43□□□□□ -2.02
DDI3YNL335W GIM5Q04493 163 aa2.43□□□□□ -2.02
DDI3YNL335W YDR034W-BQ6Q5X2 51 aa2.43□□□□□ -2.02
DDI3YNL335W Q0144Q9ZZW2 109 aa2.43□□□□□ -2.02
DDI3YNL335W TAO3P40468 2376 aa2.42□□□□□ -2.02
DDI3YNL335W TIR1P10863 254 aa2.42□□□□□ -2.02
DDI3YNL335W SEC11P15367 167 aa2.42□□□□□ -2.02
DDI3YNL335W PRE1P22141 198 aaKnown RBP2.42□□□□□ -2.02
DDI3YNL335W FYV4P38783 130 aaPredicted RBP2.42□□□□□ -2.02
DDI3YNL335W YHR173CP38864 112 aa2.42□□□□□ -2.02
DDI3YNL335W MSL1P40567 111 aaPredicted RBP2.42□□□□□ -2.02
DDI3YNL335W UPS3Q04006 179 aa2.42□□□□□ -2.02
DDI3YNL335W FIT2Q08906 153 aa2.42□□□□□ -2.02
DDI3YNL335W ACC1Q00955 2233 aaKnown RBP2.42□□□□□ -2.02
DDI3YNL335W CSF1Q12150 2958 aa2.41□□□□□ -2.02
DDI3YNL335W RPL35AP0CX84 120 aaKnown RBP2.41□□□□□ -2.02
DDI3YNL335W RPL35BP0CX85 120 aaKnown RBP2.41□□□□□ -2.02
DDI3YNL335W FPR2P32472 135 aa2.41□□□□□ -2.02
DDI3YNL335W PAU7P39545 55 aa2.41□□□□□ -2.02
DDI3YNL335W YNL194CP40169 301 aa2.41□□□□□ -2.02
DDI3YNL335W SIP18P50263 79 aa2.41□□□□□ -2.02
DDI3YNL335W TOM7P53507 60 aa2.41□□□□□ -2.02
DDI3YNL335W WIP1Q2V2P8 89 aa2.41□□□□□ -2.02
DDI3YNL335W YOS1Q3E834 85 aa2.41□□□□□ -2.02
DDI3YNL335W BEM2P39960 2167 aaKnown RBP2.4□□□□□ -2.02
DDI3YNL335W MRS1P07266 363 aa2.4□□□□□ -2.03
DDI3YNL335W MRPL31P14063 131 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 271.8 ms