RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W VMA10P48836 114 aaKnown RBP0.87□□□□□ -2.27
UBC9YDL064W YOR385WQ08909 290 aa0.87□□□□□ -2.27
UBC9YDL064W HUT1Q12520 339 aa0.87□□□□□ -2.27
UBC9YDL064W DDP1Q99321 188 aaKnown RBP0.87□□□□□ -2.27
UBC9YDL064W BUD4P47136 1447 aa0.87□□□□□ -2.27
UBC9YDL064W THO2P53552 1597 aaKnown RBP0.87□□□□□ -2.27
UBC9YDL064W DOP1Q03921 1698 aa0.86□□□□□ -2.27
UBC9YDL064W EFM5P53200 248 aaKnown RBP0.86□□□□□ -2.27
UBC9YDL064W PRM3Q08931 133 aa0.86□□□□□ -2.27
UBC9YDL064W SPT6P23615 1451 aaKnown RBP0.86□□□□□ -2.27
UBC9YDL064W USO1P25386 1790 aa0.85□□□□□ -2.27
UBC9YDL064W LTE1P07866 1435 aa0.85□□□□□ -2.27
UBC9YDL064W SUI1P32911 108 aaKnown RBP0.85□□□□□ -2.27
UBC9YDL064W YNL019CP53975 284 aa0.85□□□□□ -2.27
UBC9YDL064W YRF1-1P0CX20 1796 aa0.85□□□□□ -2.27
UBC9YDL064W YRF1-5P0CX21 1796 aa0.85□□□□□ -2.27
UBC9YDL064W YRF1-8P0CX22 1796 aa0.85□□□□□ -2.27
UBC9YDL064W YPR117WQ06116 2489 aa0.84□□□□□ -2.27
UBC9YDL064W SIN3P22579 1536 aa0.84□□□□□ -2.27
UBC9YDL064W PDR15Q04182 1529 aaKnown RBP0.84□□□□□ -2.27
UBC9YDL064W ATG2P53855 1592 aa0.84□□□□□ -2.27
UBC9YDL064W LSM1P47017 172 aaKnown RBP0.84□□□□□ -2.27
UBC9YDL064W YDR366CP87287 132 aa0.84□□□□□ -2.27
UBC9YDL064W GEA2P39993 1459 aaKnown RBP0.84□□□□□ -2.28
UBC9YDL064W TCB3Q03640 1545 aaKnown RBP0.84□□□□□ -2.28
UBC9YDL064W RPL40AP0CH08 128 aaKnown RBP0.83□□□□□ -2.28
UBC9YDL064W RPL40BP0CH09 128 aaKnown RBP0.83□□□□□ -2.28
UBC9YDL064W SRL3P36167 246 aa0.83□□□□□ -2.28
UBC9YDL064W TY1B-BRQ12193 1756 aa0.83□□□□□ -2.28
UBC9YDL064W TY1B-GR3Q12316 1755 aa0.83□□□□□ -2.28
UBC9YDL064W TY1B-ORQ92393 1755 aa0.83□□□□□ -2.28
UBC9YDL064W PDR10P51533 1564 aa0.83□□□□□ -2.28
UBC9YDL064W RKR1Q04781 1562 aa0.83□□□□□ -2.28
UBC9YDL064W NMT1P14743 455 aa0.82□□□□□ -2.28
UBC9YDL064W YHR140WP38842 239 aa0.82□□□□□ -2.28
UBC9YDL064W IRC21Q04772 201 aa0.82□□□□□ -2.28
UBC9YDL064W RAF1Q06891 181 aa0.82□□□□□ -2.28
UBC9YDL064W YHR213WP0CI67 198 aa0.81□□□□□ -2.28
UBC9YDL064W FUN14P18411 198 aa0.81□□□□□ -2.28
UBC9YDL064W YMR141CP40211 102 aa0.81□□□□□ -2.28
UBC9YDL064W YJL009WP47078 108 aa0.81□□□□□ -2.28
UBC9YDL064W COF1Q03048 143 aaKnown RBP0.81□□□□□ -2.28
UBC9YDL064W COA4Q05809 96 aa0.81□□□□□ -2.28
UBC9YDL064W SEC7P11075 2009 aaKnown RBP0.81□□□□□ -2.28
UBC9YDL064W NUM1Q00402 2748 aa0.8□□□□□ -2.28
UBC9YDL064W SFT2P38166 215 aa0.8□□□□□ -2.28
UBC9YDL064W AIM4P38305 123 aaPredicted RBP0.8□□□□□ -2.28
UBC9YDL064W BRP1P53194 125 aa0.8□□□□□ -2.28
UBC9YDL064W NAT5Q08689 176 aa0.8□□□□□ -2.28
UBC9YDL064W SPC3Q12133 184 aa0.8□□□□□ -2.28
UBC9YDL064W TOR1P35169 2470 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-LR1P0C2J3 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-FP0CX63 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-GR2P0CX64 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-CP25384 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-DR2Q03494 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY1B-DR1Q03855 1755 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-DR3Q07791 1770 aaKnown RBP0.8□□□□□ -2.28
UBC9YDL064W TY2B-OR1Q12113 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-DR1Q12472 1770 aa0.8□□□□□ -2.28
UBC9YDL064W TY2B-OR2Q12501 1770 aa0.8□□□□□ -2.28
UBC9YDL064W SKI3P17883 1432 aaKnown RBP0.8□□□□□ -2.28
UBC9YDL064W RPS1AP33442 255 aaKnown RBP0.79□□□□□ -2.28
UBC9YDL064W TRS20P38334 175 aa0.79□□□□□ -2.28
UBC9YDL064W LSM8P47093 109 aaKnown RBP0.79□□□□□ -2.28
UBC9YDL064W RBL2P48606 106 aaKnown RBP0.79□□□□□ -2.28
UBC9YDL064W YPL067CQ02754 198 aa0.79□□□□□ -2.28
UBC9YDL064W DNF3Q12674 1656 aa0.78□□□□□ -2.28
UBC9YDL064W HHO1P53551 258 aa0.78□□□□□ -2.28
UBC9YDL064W YSP2Q06681 1438 aa0.78□□□□□ -2.28
UBC9YDL064W VPS15P22219 1454 aa0.78□□□□□ -2.28
UBC9YDL064W UFD4P33202 1483 aa0.78□□□□□ -2.28
UBC9YDL064W BUD3P25558 1636 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-HO13535 1793 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-DR5P0C2I2 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-DR6P0C2I3 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-LR2P0C2I5 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-LR3P0C2I6 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TY1B-PR1P0C2I9 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TY1B-PR2P0C2J0 1756 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-PR3P0C2J1 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TY1B-JR1P47098 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-ML2Q03434 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TY1B-ER1Q03612 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-ML1Q04711 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TY1B-GR2Q12269 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-OLQ12273 1755 aa0.78□□□□□ -2.29
UBC9YDL064W TY1B-PLQ12414 1755 aaKnown RBP0.78□□□□□ -2.29
UBC9YDL064W TAO3P40468 2376 aa0.77□□□□□ -2.29
UBC9YDL064W RTC6O14464 93 aa0.77□□□□□ -2.29
UBC9YDL064W ANB1P19211 157 aa0.77□□□□□ -2.29
UBC9YDL064W QCR10P37299 77 aa0.77□□□□□ -2.29
UBC9YDL064W YAP3P38749 330 aa0.77□□□□□ -2.29
UBC9YDL064W SPG1P50088 95 aa0.77□□□□□ -2.29
UBC9YDL064W YGR039WP53225 103 aa0.77□□□□□ -2.29
UBC9YDL064W XRN1P22147 1528 aaKnown RBP0.77□□□□□ -2.29
UBC9YDL064W TY2B-BQ12491 1770 aa0.77□□□□□ -2.29
UBC9YDL064W ARO1P08566 1588 aaKnown RBP0.76□□□□□ -2.29
UBC9YDL064W CUP1-1P0CX80 61 aa0.76□□□□□ -2.29
UBC9YDL064W CUP1-2P0CX81 61 aa0.76□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms