Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 NSR1YGR159C 1245 nt14.77□□□□□ -0.05
LSM8P47093 SSA3YBL075C 1950 nt14.17□□□□□ -0.14
LSM8P47093 MDJ1YFL016C 1536 nt14.15□□□□□ -0.14
LSM8P47093 YML009W-BYML009W-B 477 nt13.86□□□□□ -0.19
LSM8P47093 NOP1YDL014W 984 nt13.06□□□□□ -0.32
LSM8P47093 YJL027CYJL027C 417 nt12.97□□□□□ -0.33
LSM8P47093 YBR190WYBR190W 312 nt12.4□□□□□ -0.42
LSM8P47093 PUT4YOR348C 1884 nt12.11□□□□□ -0.47
LSM8P47093 SSA4YER103W 1929 nt12.1□□□□□ -0.47
LSM8P47093 RTC3YHR087W 336 nt12.06□□□□□ -0.48
LSM8P47093 DBP2YNL112W 1641 nt12.04□□□□□ -0.48
LSM8P47093 PAC11YDR488C 1602 nt12□□□□□ -0.49
LSM8P47093 SPT5YML010W 3192 nt11.92□□□□□ -0.5
LSM8P47093 NVJ2YPR091C 2313 nt11.81□□□□□ -0.52
LSM8P47093 BDF1YLR399C 2061 nt11.77□□□□□ -0.53
LSM8P47093 POA1YBR022W 534 nt11.63□□□□□ -0.55
LSM8P47093 BSC6YOL137W 1494 nt11.6□□□□□ -0.55
LSM8P47093 TAT1YBR069C 1860 nt11.59□□□□□ -0.55
LSM8P47093 ARE1YCR048W 1833 nt11.53□□□□□ -0.56
LSM8P47093 FPS1YLL043W 2010 nt11.46□□□□□ -0.57
LSM8P47093 YHR049C-AYHR049C-A 297 nt11.4□□□□□ -0.58
LSM8P47093 SRX1YKL086W 384 nt11.36□□□□□ -0.59
LSM8P47093 RVS167YDR388W 1449 nt11.17□□□□□ -0.62
LSM8P47093 URN1YPR152C 1398 nt11.16□□□□□ -0.62
LSM8P47093 SAH1YER043C 1350 nt11.14□□□□□ -0.63
LSM8P47093 BUD23YCR047C 828 nt11.05□□□□□ -0.64
LSM8P47093 MEP2YNL142W 1500 nt11.02□□□□□ -0.65
LSM8P47093 Q0297Q0297 156 nt11.01□□□□□ -0.65
LSM8P47093 SSA1YAL005C 1929 nt10.96□□□□□ -0.66
LSM8P47093 YKL036CYKL036C 393 nt10.95□□□□□ -0.66
LSM8P47093 TRN1tP(UGG)A 72 nt10.94□□□□□ -0.66
LSM8P47093 SUF9tP(UGG)F 72 nt10.94□□□□□ -0.66
LSM8P47093 SUF8tP(UGG)H 72 nt10.94□□□□□ -0.66
LSM8P47093 tP(UGG)LtP(UGG)L 72 nt10.94□□□□□ -0.66
LSM8P47093 SUF7tP(UGG)M 72 nt10.94□□□□□ -0.66
LSM8P47093 tP(UGG)N1tP(UGG)N1 72 nt10.94□□□□□ -0.66
LSM8P47093 tP(UGG)N2tP(UGG)N2 72 nt10.94□□□□□ -0.66
LSM8P47093 tP(UGG)O1tP(UGG)O1 72 nt10.94□□□□□ -0.66
LSM8P47093 SUF11tP(UGG)O2 72 nt10.94□□□□□ -0.66
LSM8P47093 OPI9YLR338W 858 nt10.93□□□□□ -0.66
LSM8P47093 SCJ1YMR214W 1134 nt10.93□□□□□ -0.66
LSM8P47093 UME6YDR207C 2511 nt10.89□□□□□ -0.67
LSM8P47093 YBR220CYBR220C 1683 nt10.83□□□□□ -0.68
LSM8P47093 CCC1YLR220W 969 nt10.8□□□□□ -0.68
LSM8P47093 PCH2YBR186W 1695 nt10.78□□□□□ -0.68
LSM8P47093 DCW1YKL046C 1350 nt10.77□□□□□ -0.68
LSM8P47093 GUT2YIL155C 1950 nt10.75□□□□□ -0.69
LSM8P47093 YMR090WYMR090W 684 nt10.72□□□□□ -0.69
LSM8P47093 NAB2YGL122C 1578 nt10.72□□□□□ -0.69
LSM8P47093 YCR051WYCR051W 669 nt10.69□□□□□ -0.7
LSM8P47093 PTC2YER089C 1395 nt10.67□□□□□ -0.7
LSM8P47093 SEC11YIR022W 504 nt10.67□□□□□ -0.7
LSM8P47093 PUN1YLR414C 792 nt10.63□□□□□ -0.71
LSM8P47093 BOR1YNL275W 1731 nt10.63□□□□□ -0.71
LSM8P47093 EMI2YDR516C 1503 nt10.63□□□□□ -0.71
LSM8P47093 YJL225CYJL225C 5277 nt10.59□□□□□ -0.71
LSM8P47093 SDH1YKL148C 1923 nt10.56□□□□□ -0.72
LSM8P47093 PIB2YGL023C 1908 nt10.51□□□□□ -0.73
LSM8P47093 DEP1YAL013W 1218 nt10.5□□□□□ -0.73
LSM8P47093 RPN10YHR200W 807 nt10.49□□□□□ -0.73
LSM8P47093 YDL221WYDL221W 552 nt10.46□□□□□ -0.73
LSM8P47093 SHR5YOL110W 714 nt10.46□□□□□ -0.73
LSM8P47093 YPS1YLR120C 1710 nt10.45□□□□□ -0.74
LSM8P47093 MCH5YOR306C 1566 nt10.44□□□□□ -0.74
LSM8P47093 YHR165W-AYHR165W-A 312 nt10.43□□□□□ -0.74
LSM8P47093 FIS1YIL065C 468 nt10.42□□□□□ -0.74
LSM8P47093 RTF1YGL244W 1677 nt10.38□□□□□ -0.75
LSM8P47093 RDN37-1RDN37-1 5354 nt10.37□□□□□ -0.75
LSM8P47093 RDN37-2RDN37-2 5354 nt10.37□□□□□ -0.75
LSM8P47093 DAL1YIR027C 1383 nt10.35□□□□□ -0.75
LSM8P47093 SCC4YER147C 1875 nt10.32□□□□□ -0.76
LSM8P47093 FPR4YLR449W 1179 nt10.29□□□□□ -0.76
LSM8P47093 YJR018WYJR018W 363 nt10.28□□□□□ -0.76
LSM8P47093 YNL208WYNL208W 600 nt10.26□□□□□ -0.77
LSM8P47093 PHO4YFR034C 939 nt10.25□□□□□ -0.77
LSM8P47093 YOL085CYOL085C 342 nt10.23□□□□□ -0.77
LSM8P47093 YSC84YHR016C 1407 nt10.22□□□□□ -0.77
LSM8P47093 PTK1YKL198C 1989 nt10.21□□□□□ -0.77
LSM8P47093 BOP3YNL042W 1191 nt10.21□□□□□ -0.77
LSM8P47093 ALG12YNR030W 1656 nt10.21□□□□□ -0.78
LSM8P47093 YDR095CYDR095C 411 nt10.2□□□□□ -0.78
LSM8P47093 CAC2YML102W 1407 nt10.17□□□□□ -0.78
LSM8P47093 YHL050CYHL050C 2094 nt10.11□□□□□ -0.79
LSM8P47093 INM2YDR287W 879 nt10.09□□□□□ -0.79
LSM8P47093 PTP1YDL230W 1008 nt10.05□□□□□ -0.8
LSM8P47093 IRC15YPL017C 1500 nt10.04□□□□□ -0.8
LSM8P47093 HSP60YLR259C 1719 nt10.03□□□□□ -0.8
LSM8P47093 GIS3YLR094C 1509 nt10.02□□□□□ -0.81
LSM8P47093 RPP2AYOL039W 321 nt10.01□□□□□ -0.81
LSM8P47093 YFL054CYFL054C 1941 nt9.97□□□□□ -0.81
LSM8P47093 tP(UGG)O3tP(UGG)O3 72 nt9.97□□□□□ -0.81
LSM8P47093 SPT8YLR055C 1809 nt9.97□□□□□ -0.81
LSM8P47093 RRT12YCR045C 1476 nt9.89□□□□□ -0.83
LSM8P47093 NAR1YNL240C 1476 nt9.89□□□□□ -0.83
LSM8P47093 RPP1BYDL130W 321 nt9.88□□□□□ -0.83
LSM8P47093 YJR120WYJR120W 351 nt9.83□□□□□ -0.84
LSM8P47093 RPP2BYDR382W 333 nt9.82□□□□□ -0.84
LSM8P47093 YNL195CYNL195C 786 nt9.81□□□□□ -0.84
LSM8P47093 YBL100CYBL100C 315 nt9.8□□□□□ -0.84
LSM8P47093 GLK1YCL040W 1503 nt9.8□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 42 ms