RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W NSA2P40078 261 aaKnown RBP1.29□□□□□ -2.2
MSL1YIR009W LSM1P47017 172 aaKnown RBP1.29□□□□□ -2.2
MSL1YIR009W YJR015WP47090 510 aa1.29□□□□□ -2.2
MSL1YIR009W YGL193CP53097 103 aa1.29□□□□□ -2.2
MSL1YIR009W SAY1P53324 424 aa1.29□□□□□ -2.2
MSL1YIR009W YDC1Q02896 317 aa1.29□□□□□ -2.2
MSL1YIR009W RAD28Q12021 506 aa1.29□□□□□ -2.2
MSL1YIR009W EFG1Q3E705 233 aaKnown RBP1.29□□□□□ -2.2
MSL1YIR009W ATG40Q99325 256 aa1.29□□□□□ -2.2
MSL1YIR009W MSB2P32334 1306 aa1.29□□□□□ -2.2
MSL1YIR009W ADE6P38972 1358 aaKnown RBP1.29□□□□□ -2.2
MSL1YIR009W RAD6P06104 172 aa1.28□□□□□ -2.2
MSL1YIR009W IDP1P21954 428 aaKnown RBP1.28□□□□□ -2.2
MSL1YIR009W YCL042WP25572 119 aa1.28□□□□□ -2.2
MSL1YIR009W HSP30P25619 332 aa1.28□□□□□ -2.2
MSL1YIR009W FYV4P38783 130 aaPredicted RBP1.28□□□□□ -2.2
MSL1YIR009W YER135CP40082 130 aa1.28□□□□□ -2.2
MSL1YIR009W RIO2P40160 425 aaKnown RBP1.28□□□□□ -2.2
MSL1YIR009W YPL073CP40323 161 aa1.28□□□□□ -2.2
MSL1YIR009W APQ12P40532 138 aa1.28□□□□□ -2.2
MSL1YIR009W XPT1P47165 209 aa1.28□□□□□ -2.2
MSL1YIR009W YNL033WP53964 284 aa1.28□□□□□ -2.2
MSL1YIR009W YKR005CQ02203 525 aa1.28□□□□□ -2.2
MSL1YIR009W ATP20Q12233 115 aa1.28□□□□□ -2.2
MSL1YIR009W FLO9P39712 1322 aa1.28□□□□□ -2.2
MSL1YIR009W TY4B-JP47024 1803 aa1.27□□□□□ -2.21
MSL1YIR009W DDI2P0CH63 225 aa1.27□□□□□ -2.21
MSL1YIR009W DDI3P0CH64 225 aa1.27□□□□□ -2.21
MSL1YIR009W YBR209WP38311 105 aa1.27□□□□□ -2.21
MSL1YIR009W YEL028WP39989 153 aa1.27□□□□□ -2.21
MSL1YIR009W GLR1P41921 483 aaKnown RBP1.27□□□□□ -2.21
MSL1YIR009W PIR1Q03178 341 aa1.27□□□□□ -2.21
MSL1YIR009W RAV2Q03956 351 aa1.27□□□□□ -2.21
MSL1YIR009W CUE4Q04201 117 aaPredicted RBP1.27□□□□□ -2.21
MSL1YIR009W SML1Q04964 104 aa1.27□□□□□ -2.21
MSL1YIR009W ACC1Q00955 2233 aaKnown RBP1.26□□□□□ -2.21
MSL1YIR009W ATP5P09457 212 aa1.26□□□□□ -2.21
MSL1YIR009W UBC8P28263 218 aa1.26□□□□□ -2.21
MSL1YIR009W ACP1P32463 125 aa1.26□□□□□ -2.21
MSL1YIR009W UPS2P35200 230 aa1.26□□□□□ -2.21
MSL1YIR009W SHE2P36068 246 aaKnown RBP RIP-Chip data1.26□□□□□ -2.21not detected
MSL1YIR009W RRT1P38192 103 aa1.26□□□□□ -2.21
MSL1YIR009W DSE2P38844 325 aa1.26□□□□□ -2.21
MSL1YIR009W GIM4P40005 111 aaKnown RBP1.26□□□□□ -2.21
MSL1YIR009W DLS1P40366 167 aa1.26□□□□□ -2.21
MSL1YIR009W YFR054CP43622 192 aa1.26□□□□□ -2.21
MSL1YIR009W FIP1P45976 327 aa1.26□□□□□ -2.21
MSL1YIR009W KNH1P50112 268 aa1.26□□□□□ -2.21
MSL1YIR009W CGI121Q03705 181 aaKnown RBP1.26□□□□□ -2.21
MSL1YIR009W PKR1Q03880 122 aaKnown RBP1.26□□□□□ -2.21
MSL1YIR009W RIM9Q04734 239 aa1.26□□□□□ -2.21
MSL1YIR009W YPR174CQ06616 221 aaPredicted RBP1.26□□□□□ -2.21
MSL1YIR009W YPR013CQ12145 317 aa1.26□□□□□ -2.21
MSL1YIR009W SEC11P15367 167 aa1.25□□□□□ -2.21
MSL1YIR009W GSP2P32836 220 aaKnown RBP1.25□□□□□ -2.21
MSL1YIR009W NUF2P33895 451 aa1.25□□□□□ -2.21
MSL1YIR009W NRG2P38082 220 aa1.25□□□□□ -2.21
MSL1YIR009W VMA22P38784 181 aa1.25□□□□□ -2.21
MSL1YIR009W IPI1P38803 334 aaPredicted RBP1.25□□□□□ -2.21
MSL1YIR009W SVP26P38869 228 aa1.25□□□□□ -2.21
MSL1YIR009W CYC2P38909 366 aa1.25□□□□□ -2.21
MSL1YIR009W YNL200CP40165 246 aaKnown RBP1.25□□□□□ -2.21
MSL1YIR009W YGR201CP42936 225 aa1.25□□□□□ -2.21
MSL1YIR009W MOG1P47123 218 aa1.25□□□□□ -2.21
MSL1YIR009W CCC1P47818 322 aa1.25□□□□□ -2.21
MSL1YIR009W YGL204CP53089 101 aa1.25□□□□□ -2.21
MSL1YIR009W DAD3P69850 94 aa1.25□□□□□ -2.21
MSL1YIR009W SYM1Q06563 197 aa1.25□□□□□ -2.21
MSL1YIR009W HRD1Q08109 551 aa1.25□□□□□ -2.21
MSL1YIR009W RIB3Q99258 208 aa1.25□□□□□ -2.21
MSL1YIR009W RPO41P13433 1351 aaKnown RBP1.24□□□□□ -2.21
MSL1YIR009W TFC1P32367 649 aa1.24□□□□□ -2.21
MSL1YIR009W YKR045CP36138 183 aa1.24□□□□□ -2.21
MSL1YIR009W HTD2P38790 280 aaKnown RBP1.24□□□□□ -2.21
MSL1YIR009W UPS3Q04006 179 aa1.24□□□□□ -2.21
MSL1YIR009W YDR391CQ04170 232 aa1.24□□□□□ -2.21
MSL1YIR009W SPC2Q04969 178 aa1.24□□□□□ -2.21
MSL1YIR009W RNH202Q05635 350 aa1.24□□□□□ -2.21
MSL1YIR009W PRP11Q07350 266 aaPredicted RBP1.24□□□□□ -2.21
MSL1YIR009W HFA1P32874 2273 aa1.23□□□□□ -2.21
MSL1YIR009W COX8P04039 78 aa1.23□□□□□ -2.21
MSL1YIR009W MDH2P22133 377 aa1.23□□□□□ -2.21
MSL1YIR009W SPT14P32363 452 aa1.23□□□□□ -2.21
MSL1YIR009W POP7P38291 140 aa1.23□□□□□ -2.21
MSL1YIR009W YBR219CP38317 127 aa1.23□□□□□ -2.21
MSL1YIR009W YHL018WP38744 120 aaPredicted RBP1.23□□□□□ -2.21
MSL1YIR009W YJL218WP40892 196 aaKnown RBP1.23□□□□□ -2.21
MSL1YIR009W YGR042WP53227 271 aa1.23□□□□□ -2.21
MSL1YIR009W LIP1Q03579 150 aa1.23□□□□□ -2.21
MSL1YIR009W FIT2Q08906 153 aa1.23□□□□□ -2.21
MSL1YIR009W TY4B-HP0C2J7 1802 aa1.23□□□□□ -2.21
MSL1YIR009W PEP8P40335 379 aa1.22□□□□□ -2.21
MSL1YIR009W MOB1P40484 314 aa1.22□□□□□ -2.21
MSL1YIR009W POP3P53833 195 aaPredicted RBP1.22□□□□□ -2.21
MSL1YIR009W BUD25P85052 153 aa1.22□□□□□ -2.21
MSL1YIR009W GRX5Q02784 150 aa1.22□□□□□ -2.21
MSL1YIR009W UPS1Q05776 175 aa1.22□□□□□ -2.21
MSL1YIR009W ANT1Q06497 328 aa1.22□□□□□ -2.21
MSL1YIR009W UIP4Q08926 304 aa1.22□□□□□ -2.21
MSL1YIR009W ATG41Q12048 136 aa1.22□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms