Protein–RNA interactions for Protein: Q99258

RIB3, 3,4-dihydroxy-2-butanone 4-phosphate synthase, yeastyeast

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RIB3Q99258 NSR1YGR159C 1245 nt18.87■□□□□ 0.61
RIB3Q99258 YML009W-BYML009W-B 477 nt18.62■□□□□ 0.57
RIB3Q99258 NOP1YDL014W 984 nt17.91■□□□□ 0.46
RIB3Q99258 MDJ1YFL016C 1536 nt17.2■□□□□ 0.34
RIB3Q99258 YKL036CYKL036C 393 nt16.09■□□□□ 0.17
RIB3Q99258 YJL027CYJL027C 417 nt15.85■□□□□ 0.13
RIB3Q99258 SRX1YKL086W 384 nt15.62■□□□□ 0.09
RIB3Q99258 Q0297Q0297 156 nt15.49■□□□□ 0.07
RIB3Q99258 DBP2YNL112W 1641 nt15□□□□□ -0.01
RIB3Q99258 YCR051WYCR051W 669 nt14.84□□□□□ -0.03
RIB3Q99258 YBR190WYBR190W 312 nt14.78□□□□□ -0.04
RIB3Q99258 RTC3YHR087W 336 nt14.48□□□□□ -0.09
RIB3Q99258 SCS3YGL126W 1143 nt14.38□□□□□ -0.11
RIB3Q99258 TRN1tP(UGG)A 72 nt14.38□□□□□ -0.11
RIB3Q99258 SUF9tP(UGG)F 72 nt14.38□□□□□ -0.11
RIB3Q99258 SUF8tP(UGG)H 72 nt14.38□□□□□ -0.11
RIB3Q99258 tP(UGG)LtP(UGG)L 72 nt14.38□□□□□ -0.11
RIB3Q99258 SUF7tP(UGG)M 72 nt14.38□□□□□ -0.11
RIB3Q99258 tP(UGG)N1tP(UGG)N1 72 nt14.38□□□□□ -0.11
RIB3Q99258 tP(UGG)N2tP(UGG)N2 72 nt14.38□□□□□ -0.11
RIB3Q99258 tP(UGG)O1tP(UGG)O1 72 nt14.38□□□□□ -0.11
RIB3Q99258 SUF11tP(UGG)O2 72 nt14.38□□□□□ -0.11
RIB3Q99258 CCC1YLR220W 969 nt14.31□□□□□ -0.12
RIB3Q99258 RVS167YDR388W 1449 nt14.05□□□□□ -0.16
RIB3Q99258 YOL085CYOL085C 342 nt13.94□□□□□ -0.18
RIB3Q99258 SSA3YBL075C 1950 nt13.93□□□□□ -0.18
RIB3Q99258 RPP1BYDL130W 321 nt13.92□□□□□ -0.18
RIB3Q99258 PKP1YIL042C 1185 nt13.82□□□□□ -0.2
RIB3Q99258 SCJ1YMR214W 1134 nt13.82□□□□□ -0.2
RIB3Q99258 PUT4YOR348C 1884 nt13.75□□□□□ -0.21
RIB3Q99258 tP(UGG)O3tP(UGG)O3 72 nt13.48□□□□□ -0.25
RIB3Q99258 SHR5YOL110W 714 nt13.42□□□□□ -0.26
RIB3Q99258 ARE1YCR048W 1833 nt13.36□□□□□ -0.27
RIB3Q99258 URN1YPR152C 1398 nt13.35□□□□□ -0.27
RIB3Q99258 PET122YER153C 765 nt13.35□□□□□ -0.27
RIB3Q99258 POA1YBR022W 534 nt13.33□□□□□ -0.28
RIB3Q99258 SAH1YER043C 1350 nt13.29□□□□□ -0.28
RIB3Q99258 DEP1YAL013W 1218 nt13.24□□□□□ -0.29
RIB3Q99258 OPI9YLR338W 858 nt13.23□□□□□ -0.29
RIB3Q99258 YHR049C-AYHR049C-A 297 nt13.21□□□□□ -0.29
RIB3Q99258 SCR1SCR1 522 nt13.12□□□□□ -0.31
RIB3Q99258 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
RIB3Q99258 RPN10YHR200W 807 nt13.06□□□□□ -0.32
RIB3Q99258 YDJ1YNL064C 1230 nt13.02□□□□□ -0.33
RIB3Q99258 YNL208WYNL208W 600 nt12.95□□□□□ -0.34
RIB3Q99258 RRN5YLR141W 1092 nt12.94□□□□□ -0.34
RIB3Q99258 BUD23YCR047C 828 nt12.92□□□□□ -0.34
RIB3Q99258 GAR1YHR089C 618 nt12.86□□□□□ -0.35
RIB3Q99258 PUN1YLR414C 792 nt12.85□□□□□ -0.35
RIB3Q99258 PTC2YER089C 1395 nt12.79□□□□□ -0.36
RIB3Q99258 ATS1YAL020C 1002 nt12.75□□□□□ -0.37
RIB3Q99258 SPT5YML010W 3192 nt12.75□□□□□ -0.37
RIB3Q99258 YJR018WYJR018W 363 nt12.71□□□□□ -0.37
RIB3Q99258 NAB2YGL122C 1578 nt12.69□□□□□ -0.38
RIB3Q99258 YER088W-BYER088W-B 147 nt12.67□□□□□ -0.38
RIB3Q99258 SSA4YER103W 1929 nt12.56□□□□□ -0.4
RIB3Q99258 RSB1YOR049C 1065 nt12.55□□□□□ -0.4
RIB3Q99258 TIR1YER011W 765 nt12.43□□□□□ -0.42
RIB3Q99258 FPR4YLR449W 1179 nt12.43□□□□□ -0.42
RIB3Q99258 DAL1YIR027C 1383 nt12.42□□□□□ -0.42
RIB3Q99258 FIS1YIL065C 468 nt12.4□□□□□ -0.42
RIB3Q99258 SSA1YAL005C 1929 nt12.35□□□□□ -0.43
RIB3Q99258 RPP2BYDR382W 333 nt12.35□□□□□ -0.43
RIB3Q99258 YJR120WYJR120W 351 nt12.35□□□□□ -0.43
RIB3Q99258 MEP2YNL142W 1500 nt12.34□□□□□ -0.43
RIB3Q99258 INM2YDR287W 879 nt12.32□□□□□ -0.44
RIB3Q99258 PHO4YFR034C 939 nt12.29□□□□□ -0.44
RIB3Q99258 YPS1YLR120C 1710 nt12.21□□□□□ -0.45
RIB3Q99258 YHR165W-AYHR165W-A 312 nt12.14□□□□□ -0.47
RIB3Q99258 DCW1YKL046C 1350 nt12.14□□□□□ -0.47
RIB3Q99258 YBL100CYBL100C 315 nt12.12□□□□□ -0.47
RIB3Q99258 BDF1YLR399C 2061 nt12.09□□□□□ -0.47
RIB3Q99258 YDR095CYDR095C 411 nt12.05□□□□□ -0.48
RIB3Q99258 SRB2YHR041C 633 nt12.04□□□□□ -0.48
RIB3Q99258 BDH2YAL061W 1254 nt11.99□□□□□ -0.49
RIB3Q99258 EMI2YDR516C 1503 nt11.98□□□□□ -0.49
RIB3Q99258 YMR090WYMR090W 684 nt11.97□□□□□ -0.49
RIB3Q99258 FUN26YAL022C 1554 nt11.96□□□□□ -0.5
RIB3Q99258 TAT1YBR069C 1860 nt11.92□□□□□ -0.5
RIB3Q99258 ALF1YNL148C 765 nt11.92□□□□□ -0.5
RIB3Q99258 TRM9YML014W 840 nt11.89□□□□□ -0.51
RIB3Q99258 YBR220CYBR220C 1683 nt11.88□□□□□ -0.51
RIB3Q99258 PST2YDR032C 597 nt11.87□□□□□ -0.51
RIB3Q99258 RPP2AYOL039W 321 nt11.86□□□□□ -0.51
RIB3Q99258 YDL221WYDL221W 552 nt11.83□□□□□ -0.52
RIB3Q99258 CAC2YML102W 1407 nt11.83□□□□□ -0.52
RIB3Q99258 PTP1YDL230W 1008 nt11.81□□□□□ -0.52
RIB3Q99258 WWM1YFL010C 636 nt11.81□□□□□ -0.52
RIB3Q99258 SDH1YKL148C 1923 nt11.78□□□□□ -0.52
RIB3Q99258 LSM3YLR438C-A 270 nt11.75□□□□□ -0.53
RIB3Q99258 CCT6YDR188W 1641 nt11.74□□□□□ -0.53
RIB3Q99258 SUF2tP(AGG)C 72 nt11.7□□□□□ -0.54
RIB3Q99258 SUF10tP(AGG)N 72 nt11.7□□□□□ -0.54
RIB3Q99258 SIS1YNL007C 1059 nt11.7□□□□□ -0.54
RIB3Q99258 SCC4YER147C 1875 nt11.66□□□□□ -0.54
RIB3Q99258 IRC15YPL017C 1500 nt11.64□□□□□ -0.55
RIB3Q99258 YFL021C-AYFL021C-A 855 nt11.6□□□□□ -0.55
RIB3Q99258 GIS3YLR094C 1509 nt11.59□□□□□ -0.55
RIB3Q99258 YGR021WYGR021W 873 nt11.58□□□□□ -0.56
RIB3Q99258 ART5YGR068C 1761 nt11.57□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms