RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	CUE1	P38428	203 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	MTC6	P38849	526 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	YER134C	P40081	178 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	YIL163C	P40448	117 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	RPA43	P46669	326 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	XPT1	P47165	209 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	DSK2	P48510	373 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	WSC2	P53832	503 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	YPL077C	Q02831	240 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	PKR1	Q03880	122 aa	Known RBP	4.56	□□□□□ -1.68
PDH1	YPR002W	TVP18	Q04767	167 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	PAU23	Q07987	124 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	AKR2	Q12013	749 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	YDL157C	Q12082	118 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	TPT1	Q12272	230 aa	Known RBP	4.56	□□□□□ -1.68
PDH1	YPR002W	SMT3	Q12306	101 aa	Known RBP	4.56	□□□□□ -1.68
PDH1	YPR002W	PAU17	Q12370	124 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	GEP5	Q12393	293 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	CSF1	Q12150	2958 aa		4.56	□□□□□ -1.68
PDH1	YPR002W	SOD1	P00445	154 aa	Known RBP	4.55	□□□□□ -1.68
PDH1	YPR002W	YPT1	P01123	206 aa	Known RBP	4.55	□□□□□ -1.68
PDH1	YPR002W	UTR5	P32630	166 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	MRPS5	P33759	307 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	UTH1	P36135	365 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	PAM17	P36147	197 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	MIX23	P38162	196 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	SEC24	P40482	926 aa	Known RBP	4.55	□□□□□ -1.68
PDH1	YPR002W	YJR015W	P47090	510 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	TAF4	P50105	388 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	MIC27	P50945	234 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	HSK3	P69852	69 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	SHH3	Q04487	196 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	ECM18	Q04623	453 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	MCH1	Q07376	486 aa		4.55	□□□□□ -1.68
PDH1	YPR002W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.55	□□□□□ -1.68
PDH1	YPR002W	MRS3	P10566	314 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	QRI5	P32344	111 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
PDH1	YPR002W	PHD1	P36093	366 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	YBR090C	P38253	122 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	DOG1	P38774	246 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	YHR138C	P38841	114 aa	Predicted RBP	4.54	□□□□□ -1.68
PDH1	YPR002W	YER084W	P40057	128 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	YER188W	P40103	239 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	ECO1	P43605	281 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	YJL163C	P46996	555 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	DYN2	Q02647	92 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	YGL258W-A	Q3E740	77 aa		4.54	□□□□□ -1.68
PDH1	YPR002W	RPL7A	P05737	244 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	YER190C-B	P0CX94	160 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	YEL077W-A	P0CX95	160 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	YGR296C-B	P0CX96	160 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	YPL283W-B	P0CX97	160 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	YPR204C-A	P0CX98	160 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	HMRA1	P0CY11	126 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	HAP3	P13434	144 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	GSP1	P32835	219 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	GSP2	P32836	220 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	YOX1	P34161	385 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	PMU1	P36069	295 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	MRPL39	P36533	70 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	RAF1	Q06891	181 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	NDE2	Q07500	545 aa		4.53	□□□□□ -1.68
PDH1	YPR002W	RRS1	Q08746	203 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	RPL7B	Q12213	244 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	TMA7	Q3E764	64 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	SEN1	Q00416	2231 aa	Known RBP	4.53	□□□□□ -1.68
PDH1	YPR002W	YMR316C-A	I2HB70	103 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	CUP2	P15315	225 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	TOM40	P23644	387 aa	Known RBP	4.53	□□□□□ -1.69
PDH1	YPR002W	ICS2	P38284	255 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	AME1	P38313	324 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	UME6	P39001	836 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	YAR068W	P39564	161 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	PRE5	P40302	234 aa	Known RBP	4.53	□□□□□ -1.69
PDH1	YPR002W	SAS2	P40963	338 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	UBC11	P52492	156 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	NRM1	P53718	249 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	ATP19	P81451	68 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	LPP1	Q04396	274 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	TRI1	Q05024	226 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	CNL1	Q06333	122 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	CSI2	Q08054	341 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	YOL024W	Q08172	172 aa		4.53	□□□□□ -1.69
PDH1	YPR002W	YPR170W-B	P0C5R9	85 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	TIR1	P10863	254 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	TEM1	P38987	245 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	GON7	P46984	123 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	UBC13	P52490	153 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	ATG4	P53867	494 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	YPL067C	Q02754	198 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	YHP1	Q04116	353 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	CSM4	Q08955	156 aa		4.52	□□□□□ -1.69
PDH1	YPR002W	SEC4	P07560	215 aa	Known RBP	4.51	□□□□□ -1.69
PDH1	YPR002W	FPR2	P32472	135 aa		4.51	□□□□□ -1.69
PDH1	YPR002W	YHR173C	P38864	112 aa		4.51	□□□□□ -1.69
PDH1	YPR002W	BRP1	P53194	125 aa		4.51	□□□□□ -1.69
PDH1	YPR002W	YDR209C	Q03480	137 aa		4.51	□□□□□ -1.69
PDH1	YPR002W	YPL162C	Q12042	273 aa		4.51	□□□□□ -1.69
PDH1	YPR002W	SEC11	P15367	167 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 531.6 ms