RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C FIT2Q08906 153 aa3.42□□□□□ -1.86
ATG17YLR423C YLR046CQ12253 270 aa3.42□□□□□ -1.86
ATG17YLR423C TY1B-BRQ12193 1756 aa3.42□□□□□ -1.86
ATG17YLR423C TY1B-GR3Q12316 1755 aa3.42□□□□□ -1.86
ATG17YLR423C TY1B-ORQ92393 1755 aa3.42□□□□□ -1.86
ATG17YLR423C MMS1Q06211 1407 aa3.42□□□□□ -1.86
ATG17YLR423C RKR1Q04781 1562 aa3.42□□□□□ -1.86
ATG17YLR423C GEA2P39993 1459 aaKnown RBP3.41□□□□□ -1.86
ATG17YLR423C SLM6P38343 150 aa3.41□□□□□ -1.86
ATG17YLR423C YPR202WQ08993 238 aa3.41□□□□□ -1.86
ATG17YLR423C EFG1Q3E705 233 aaKnown RBP3.41□□□□□ -1.86
ATG17YLR423C RPO31P04051 1460 aa3.41□□□□□ -1.86
ATG17YLR423C PTC1P35182 281 aa3.4□□□□□ -1.87
ATG17YLR423C RCE1Q03530 315 aa3.4□□□□□ -1.87
ATG17YLR423C YRF1-1P0CX20 1796 aa3.39□□□□□ -1.87
ATG17YLR423C YRF1-5P0CX21 1796 aa3.39□□□□□ -1.87
ATG17YLR423C YRF1-8P0CX22 1796 aa3.39□□□□□ -1.87
ATG17YLR423C UPS2P35200 230 aa3.39□□□□□ -1.87
ATG17YLR423C RRP17Q04031 235 aaPredicted RBP3.39□□□□□ -1.87
ATG17YLR423C SYM1Q06563 197 aa3.39□□□□□ -1.87
ATG17YLR423C HRD1Q08109 551 aa3.39□□□□□ -1.87
ATG17YLR423C TY2B-LR1P0C2J3 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-FP0CX63 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-GR2P0CX64 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-CP25384 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-DR2Q03494 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY1B-DR1Q03855 1755 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-DR3Q07791 1770 aaKnown RBP3.38□□□□□ -1.87
ATG17YLR423C TY2B-OR1Q12113 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-DR1Q12472 1770 aa3.38□□□□□ -1.87
ATG17YLR423C TY2B-OR2Q12501 1770 aa3.38□□□□□ -1.87
ATG17YLR423C RPL2AP0CX45 254 aaKnown RBP3.38□□□□□ -1.87
ATG17YLR423C RPL2BP0CX46 254 aaKnown RBP3.38□□□□□ -1.87
ATG17YLR423C FPR1P20081 114 aaKnown RBP3.38□□□□□ -1.87
ATG17YLR423C YEL028WP39989 153 aa3.38□□□□□ -1.87
ATG17YLR423C ALB1P47019 175 aaPredicted RBP3.38□□□□□ -1.87
ATG17YLR423C UPS3Q04006 179 aa3.38□□□□□ -1.87
ATG17YLR423C NTE1Q04958 1679 aa3.38□□□□□ -1.87
ATG17YLR423C XRN1P22147 1528 aaKnown RBP3.38□□□□□ -1.87
ATG17YLR423C ATP5P09457 212 aa3.37□□□□□ -1.87
ATG17YLR423C APQ12P40532 138 aa3.37□□□□□ -1.87
ATG17YLR423C ORM1P53224 222 aa3.37□□□□□ -1.87
ATG17YLR423C HHT1P61830 136 aa3.37□□□□□ -1.87
ATG17YLR423C DML1Q03652 475 aa3.37□□□□□ -1.87
ATG17YLR423C YNL146C-AQ3E7Z1 64 aa3.37□□□□□ -1.87
ATG17YLR423C RPL30P14120 105 aaKnown RBP3.36□□□□□ -1.87
ATG17YLR423C DLS1P40366 167 aa3.36□□□□□ -1.87
ATG17YLR423C RIM9Q04734 239 aa3.36□□□□□ -1.87
ATG17YLR423C ATG41Q12048 136 aa3.36□□□□□ -1.87
ATG17YLR423C STF2P16965 84 aa3.35□□□□□ -1.87
ATG17YLR423C HYR1P40581 163 aaKnown RBP3.35□□□□□ -1.87
ATG17YLR423C NSE4P43124 402 aa3.35□□□□□ -1.87
ATG17YLR423C UPS1Q05776 175 aa3.35□□□□□ -1.87
ATG17YLR423C YOR381W-AQ3E804 55 aa3.35□□□□□ -1.87
ATG17YLR423C TY1B-HO13535 1793 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-DR5P0C2I2 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-DR6P0C2I3 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-LR2P0C2I5 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-LR3P0C2I6 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C TY1B-PR1P0C2I9 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C TY1B-PR2P0C2J0 1756 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-PR3P0C2J1 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C TY1B-JR1P47098 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-ML2Q03434 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C TY1B-ER1Q03612 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-ML1Q04711 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C TY1B-GR2Q12269 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-OLQ12273 1755 aa3.34□□□□□ -1.87
ATG17YLR423C TY1B-PLQ12414 1755 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C YEL073CP39974 107 aa3.34□□□□□ -1.87
ATG17YLR423C FLX1P40464 311 aa3.34□□□□□ -1.87
ATG17YLR423C YDR391CQ04170 232 aa3.34□□□□□ -1.87
ATG17YLR423C PST2Q12335 198 aaKnown RBP3.34□□□□□ -1.87
ATG17YLR423C ESP1Q03018 1630 aa3.33□□□□□ -1.88
ATG17YLR423C DOP1Q03921 1698 aa3.33□□□□□ -1.88
ATG17YLR423C RPB7P34087 171 aa3.33□□□□□ -1.88
ATG17YLR423C MOB1P40484 314 aa3.33□□□□□ -1.88
ATG17YLR423C LIP1Q03579 150 aa3.33□□□□□ -1.88
ATG17YLR423C YRA2P36036 203 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
ATG17YLR423C SRP102P36057 244 aaPredicted RBP3.32□□□□□ -1.88
ATG17YLR423C HPA3P39979 161 aa3.32□□□□□ -1.88
ATG17YLR423C YGL193CP53097 103 aa3.32□□□□□ -1.88
ATG17YLR423C NQM1P53228 333 aaPredicted RBP3.32□□□□□ -1.88
ATG17YLR423C YHP1Q04116 353 aa3.32□□□□□ -1.88
ATG17YLR423C TY2B-BQ12491 1770 aa3.32□□□□□ -1.88
ATG17YLR423C SKI3P17883 1432 aaKnown RBP3.31□□□□□ -1.88
ATG17YLR423C PET54P10834 293 aa3.31□□□□□ -1.88
ATG17YLR423C YAE1P47118 141 aaPredicted RBP3.31□□□□□ -1.88
ATG17YLR423C CWC27Q02770 301 aa3.31□□□□□ -1.88
ATG17YLR423C HTD2P38790 280 aaKnown RBP3.3□□□□□ -1.88
ATG17YLR423C MZM1Q03429 123 aaPredicted RBP3.3□□□□□ -1.88
ATG17YLR423C UIP4Q08926 304 aa3.3□□□□□ -1.88
ATG17YLR423C UFD4P33202 1483 aa3.28□□□□□ -1.88
ATG17YLR423C CCC1P47818 322 aa3.28□□□□□ -1.88
ATG17YLR423C YML079WQ03629 201 aa3.28□□□□□ -1.88
ATG17YLR423C YMR030W-AQ3E760 96 aa3.28□□□□□ -1.88
ATG17YLR423C TY1B-DR3Q99231 1755 aa3.28□□□□□ -1.89
ATG17YLR423C FIP1P45976 327 aa3.27□□□□□ -1.89
ATG17YLR423C PAC10P48363 199 aa3.27□□□□□ -1.89
ATG17YLR423C RAV2Q03956 351 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 81.3 ms