RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W GLC7P32598 312 aaKnown RBP4.52□□□□□ -1.69
FOB1YDR110W YER188WP40103 239 aa4.52□□□□□ -1.69
FOB1YDR110W GEP7P53171 287 aa4.52□□□□□ -1.69
FOB1YDR110W TMA10Q06177 86 aa4.52□□□□□ -1.69
FOB1YDR110W YPR063CQ12160 140 aa4.52□□□□□ -1.69
FOB1YDR110W YEL009C-AA0A023PZF2 135 aa4.52□□□□□ -1.69
FOB1YDR110W YFL068WP0CX99 160 aa4.52□□□□□ -1.69
FOB1YDR110W YLL066W-AP0CY00 160 aa4.52□□□□□ -1.69
FOB1YDR110W YLL067W-AP0CY01 160 aa4.52□□□□□ -1.69
FOB1YDR110W MRPL44P19956 98 aa4.52□□□□□ -1.69
FOB1YDR110W UTP30P36144 274 aaKnown RBP4.52□□□□□ -1.69
FOB1YDR110W SMP1P38128 452 aa4.52□□□□□ -1.69
FOB1YDR110W YAR029WP39549 74 aa4.52□□□□□ -1.69
FOB1YDR110W GNA1P43577 159 aaPredicted RBP4.52□□□□□ -1.69
FOB1YDR110W VPS25P47142 202 aa4.52□□□□□ -1.69
FOB1YDR110W ERV14P53173 138 aa4.52□□□□□ -1.69
FOB1YDR110W TAD3Q9URQ3 322 aa4.52□□□□□ -1.69
FOB1YDR110W TEM1P38987 245 aa4.51□□□□□ -1.69
FOB1YDR110W IRC22P40006 225 aa4.51□□□□□ -1.69
FOB1YDR110W SPC25P40014 221 aa4.51□□□□□ -1.69
FOB1YDR110W GAT4P40569 121 aa4.51□□□□□ -1.69
FOB1YDR110W YJL213WP40896 331 aa4.51□□□□□ -1.69
FOB1YDR110W BAT2P47176 376 aaKnown RBP4.51□□□□□ -1.69
FOB1YDR110W UPS1Q05776 175 aa4.51□□□□□ -1.69
FOB1YDR110W YHC1Q05900 231 aaKnown RBP4.51□□□□□ -1.69
FOB1YDR110W YPL162CQ12042 273 aa4.51□□□□□ -1.69
FOB1YDR110W BSC1Q12140 328 aa4.51□□□□□ -1.69
FOB1YDR110W YBL008W-AQ3E821 79 aa4.51□□□□□ -1.69
FOB1YDR110W MRS4P23500 304 aa4.5□□□□□ -1.69
FOB1YDR110W PTI1P39927 425 aaPredicted RBP4.5□□□□□ -1.69
FOB1YDR110W SNM1P40993 198 aa4.5□□□□□ -1.69
FOB1YDR110W CUP9P41817 306 aa4.5□□□□□ -1.69
FOB1YDR110W PFS2P42841 465 aaKnown RBP4.5□□□□□ -1.69
FOB1YDR110W YGL193CP53097 103 aa4.5□□□□□ -1.69
FOB1YDR110W SWT21P53873 357 aaPredicted RBP4.5□□□□□ -1.69
FOB1YDR110W YMR252CQ04814 134 aa4.5□□□□□ -1.69
FOB1YDR110W SNX3Q08826 162 aaKnown RBP4.5□□□□□ -1.69
FOB1YDR110W YPL278CQ08990 100 aa4.5□□□□□ -1.69
FOB1YDR110W YPL245WQ12179 454 aaKnown RBP4.5□□□□□ -1.69
FOB1YDR110W YPR011CQ12251 326 aa4.5□□□□□ -1.69
FOB1YDR110W HTL1Q9URQ5 78 aa4.5□□□□□ -1.69
FOB1YDR110W ATR1P13090 542 aa4.49□□□□□ -1.69
FOB1YDR110W YCR022CP25620 114 aa4.49□□□□□ -1.69
FOB1YDR110W AHT1P29589 182 aa4.49□□□□□ -1.69
FOB1YDR110W AVT6P40074 448 aa4.49□□□□□ -1.69
FOB1YDR110W CCS1P40202 249 aaKnown RBP4.49□□□□□ -1.69
FOB1YDR110W SKI6P46948 246 aaPredicted RBP4.49□□□□□ -1.69
FOB1YDR110W YMR103CQ04436 120 aa4.49□□□□□ -1.69
FOB1YDR110W ATG10Q07879 167 aa4.49□□□□□ -1.69
FOB1YDR110W SHE1P38200 338 aa4.49□□□□□ -1.69
FOB1YDR110W MPM1P40364 252 aa4.49□□□□□ -1.69
FOB1YDR110W TDA4P47153 279 aa4.49□□□□□ -1.69
FOB1YDR110W GSC2P40989 1895 aa4.48□□□□□ -1.69
FOB1YDR110W PIS1P06197 220 aaKnown RBP4.48□□□□□ -1.69
FOB1YDR110W COQ2P32378 372 aa4.48□□□□□ -1.69
FOB1YDR110W SRB6P32570 121 aa4.48□□□□□ -1.69
FOB1YDR110W EMP24P32803 203 aaKnown RBP4.48□□□□□ -1.69
FOB1YDR110W YNL200CP40165 246 aaKnown RBP4.48□□□□□ -1.69
FOB1YDR110W YMR181CQ03231 154 aa4.48□□□□□ -1.69
FOB1YDR110W SHH3Q04487 196 aa4.48□□□□□ -1.69
FOB1YDR110W CSR2Q12734 1121 aa4.48□□□□□ -1.69
FOB1YDR110W RPS18AP0CX55 146 aaKnown RBP4.47□□□□□ -1.69
FOB1YDR110W RPS18BP0CX56 146 aaPredicted RBP4.47□□□□□ -1.69
FOB1YDR110W HAP3P13434 144 aa4.47□□□□□ -1.69
FOB1YDR110W CSE2P33308 149 aa4.47□□□□□ -1.69
FOB1YDR110W ZRT3P34240 503 aa4.47□□□□□ -1.69
FOB1YDR110W COX14P39103 70 aa4.47□□□□□ -1.69
FOB1YDR110W YIL059CP40520 121 aa4.47□□□□□ -1.69
FOB1YDR110W PHS1P40857 217 aa4.47□□□□□ -1.69
FOB1YDR110W ADD37Q03233 198 aa4.47□□□□□ -1.69
FOB1YDR110W RCE1Q03530 315 aa4.47□□□□□ -1.69
FOB1YDR110W LPP1Q04396 274 aa4.47□□□□□ -1.69
FOB1YDR110W SLD7Q08457 257 aa4.47□□□□□ -1.69
FOB1YDR110W YOR097CQ12274 175 aaPredicted RBP4.47□□□□□ -1.69
FOB1YDR110W ATO3Q12359 275 aa4.47□□□□□ -1.69
FOB1YDR110W RPL9AP05738 191 aaKnown RBP4.46□□□□□ -1.69
FOB1YDR110W RPL9BP51401 191 aaKnown RBP4.46□□□□□ -1.69
FOB1YDR110W SDS23P53172 527 aa4.46□□□□□ -1.69
FOB1YDR110W URA10P30402 227 aa4.46□□□□□ -1.7
FOB1YDR110W SFT2P38166 215 aa4.46□□□□□ -1.7
FOB1YDR110W YIL152WP40455 235 aa4.46□□□□□ -1.7
FOB1YDR110W YIR035CP40579 254 aa4.46□□□□□ -1.7
FOB1YDR110W EST3Q03096 181 aa4.46□□□□□ -1.7
FOB1YDR110W YDR415CQ04033 374 aaPredicted RBP4.46□□□□□ -1.7
FOB1YDR110W KEI1Q06346 221 aa4.46□□□□□ -1.7
FOB1YDR110W GPI11Q06636 219 aa4.46□□□□□ -1.7
FOB1YDR110W YOL014WQ08110 124 aa4.46□□□□□ -1.7
FOB1YDR110W AIR2Q12476 344 aaKnown RBP4.46□□□□□ -1.7
FOB1YDR110W DDP1Q99321 188 aaKnown RBP4.46□□□□□ -1.7
FOB1YDR110W PAM17P36147 197 aa4.45□□□□□ -1.7
FOB1YDR110W PAM16P42949 149 aa4.45□□□□□ -1.7
FOB1YDR110W YFL019CP43576 117 aa4.45□□□□□ -1.7
FOB1YDR110W SMD1Q02260 146 aaPredicted RBP4.45□□□□□ -1.7
FOB1YDR110W NIP7Q08962 181 aaKnown RBP4.45□□□□□ -1.7
FOB1YDR110W YAL063C-AQ3E791 96 aa4.45□□□□□ -1.7
FOB1YDR110W FLO1P32768 1537 aa4.44□□□□□ -1.7
FOB1YDR110W HSP12P22943 109 aaKnown RBP4.44□□□□□ -1.7
FOB1YDR110W IMP1P28627 190 aa4.44□□□□□ -1.7
FOB1YDR110W NSG1P38837 291 aa4.44□□□□□ -1.7
FOB1YDR110W EMC4P53073 190 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms