Protein–RNA interactions for Protein: P46948

SKI6, Exosome complex component SKI6, yeastyeast

Predicted RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKI6P46948 NSR1YGR159C 1245 nt12.73□□□□□ -0.37
SKI6P46948 YML009W-BYML009W-B 477 nt12.04□□□□□ -0.48
SKI6P46948 MDJ1YFL016C 1536 nt12.04□□□□□ -0.48
SKI6P46948 SSA3YBL075C 1950 nt11.63□□□□□ -0.55
SKI6P46948 NOP1YDL014W 984 nt11.42□□□□□ -0.58
SKI6P46948 YJL027CYJL027C 417 nt11.07□□□□□ -0.64
SKI6P46948 YBR190WYBR190W 312 nt10.55□□□□□ -0.72
SKI6P46948 DBP2YNL112W 1641 nt10.31□□□□□ -0.76
SKI6P46948 RTC3YHR087W 336 nt10.24□□□□□ -0.77
SKI6P46948 PUT4YOR348C 1884 nt10.19□□□□□ -0.78
SKI6P46948 SSA4YER103W 1929 nt10.03□□□□□ -0.8
SKI6P46948 SRX1YKL086W 384 nt9.94□□□□□ -0.82
SKI6P46948 SPT5YML010W 3192 nt9.93□□□□□ -0.82
SKI6P46948 PAC11YDR488C 1602 nt9.79□□□□□ -0.84
SKI6P46948 POA1YBR022W 534 nt9.78□□□□□ -0.84
SKI6P46948 YKL036CYKL036C 393 nt9.77□□□□□ -0.85
SKI6P46948 BSC6YOL137W 1494 nt9.75□□□□□ -0.85
SKI6P46948 ARE1YCR048W 1833 nt9.74□□□□□ -0.85
SKI6P46948 BDF1YLR399C 2061 nt9.73□□□□□ -0.85
SKI6P46948 Q0297Q0297 156 nt9.69□□□□□ -0.86
SKI6P46948 YHR049C-AYHR049C-A 297 nt9.63□□□□□ -0.87
SKI6P46948 NVJ2YPR091C 2313 nt9.6□□□□□ -0.87
SKI6P46948 TAT1YBR069C 1860 nt9.59□□□□□ -0.87
SKI6P46948 RVS167YDR388W 1449 nt9.58□□□□□ -0.88
SKI6P46948 TRN1tP(UGG)A 72 nt9.48□□□□□ -0.89
SKI6P46948 SUF9tP(UGG)F 72 nt9.48□□□□□ -0.89
SKI6P46948 SUF8tP(UGG)H 72 nt9.48□□□□□ -0.89
SKI6P46948 tP(UGG)LtP(UGG)L 72 nt9.48□□□□□ -0.89
SKI6P46948 SUF7tP(UGG)M 72 nt9.48□□□□□ -0.89
SKI6P46948 tP(UGG)N1tP(UGG)N1 72 nt9.48□□□□□ -0.89
SKI6P46948 tP(UGG)N2tP(UGG)N2 72 nt9.48□□□□□ -0.89
SKI6P46948 tP(UGG)O1tP(UGG)O1 72 nt9.48□□□□□ -0.89
SKI6P46948 SUF11tP(UGG)O2 72 nt9.48□□□□□ -0.89
SKI6P46948 SAH1YER043C 1350 nt9.45□□□□□ -0.9
SKI6P46948 URN1YPR152C 1398 nt9.41□□□□□ -0.9
SKI6P46948 RDN37-1RDN37-1 5354 nt9.38□□□□□ -0.91
SKI6P46948 RDN37-2RDN37-2 5354 nt9.38□□□□□ -0.91
SKI6P46948 YCR051WYCR051W 669 nt9.34□□□□□ -0.91
SKI6P46948 CCC1YLR220W 969 nt9.34□□□□□ -0.91
SKI6P46948 OPI9YLR338W 858 nt9.33□□□□□ -0.92
SKI6P46948 BUD23YCR047C 828 nt9.32□□□□□ -0.92
SKI6P46948 Q0182Q0182 405 nt9.31□□□□□ -0.92
SKI6P46948 SCJ1YMR214W 1134 nt9.29□□□□□ -0.92
SKI6P46948 MEP2YNL142W 1500 nt9.26□□□□□ -0.93
SKI6P46948 YJL225CYJL225C 5277 nt9.23□□□□□ -0.93
SKI6P46948 FPS1YLL043W 2010 nt9.21□□□□□ -0.93
SKI6P46948 SSA1YAL005C 1929 nt9.18□□□□□ -0.94
SKI6P46948 NAB2YGL122C 1578 nt9.09□□□□□ -0.95
SKI6P46948 PUN1YLR414C 792 nt9.07□□□□□ -0.96
SKI6P46948 PTC2YER089C 1395 nt9.06□□□□□ -0.96
SKI6P46948 YBR220CYBR220C 1683 nt9.06□□□□□ -0.96
SKI6P46948 DCW1YKL046C 1350 nt9.04□□□□□ -0.96
SKI6P46948 SHR5YOL110W 714 nt9.03□□□□□ -0.96
SKI6P46948 RPN10YHR200W 807 nt9□□□□□ -0.97
SKI6P46948 YMR090WYMR090W 684 nt9□□□□□ -0.97
SKI6P46948 DEP1YAL013W 1218 nt8.99□□□□□ -0.97
SKI6P46948 PCH2YBR186W 1695 nt8.97□□□□□ -0.97
SKI6P46948 GUT2YIL155C 1950 nt8.95□□□□□ -0.98
SKI6P46948 EMI2YDR516C 1503 nt8.93□□□□□ -0.98
SKI6P46948 SEC11YIR022W 504 nt8.92□□□□□ -0.98
SKI6P46948 UME6YDR207C 2511 nt8.87□□□□□ -0.99
SKI6P46948 SDH1YKL148C 1923 nt8.86□□□□□ -0.99
SKI6P46948 FIS1YIL065C 468 nt8.86□□□□□ -0.99
SKI6P46948 YPS1YLR120C 1710 nt8.85□□□□□ -0.99
SKI6P46948 YOL085CYOL085C 342 nt8.84□□□□□ -0.99
SKI6P46948 YNL208WYNL208W 600 nt8.82□□□□□ -1
SKI6P46948 YDL221WYDL221W 552 nt8.81□□□□□ -1
SKI6P46948 YHR165W-AYHR165W-A 312 nt8.81□□□□□ -1
SKI6P46948 DAL1YIR027C 1383 nt8.8□□□□□ -1
SKI6P46948 YJR018WYJR018W 363 nt8.79□□□□□ -1
SKI6P46948 PIB2YGL023C 1908 nt8.76□□□□□ -1.01
SKI6P46948 BOR1YNL275W 1731 nt8.74□□□□□ -1.01
SKI6P46948 FPR4YLR449W 1179 nt8.73□□□□□ -1.01
SKI6P46948 PHO4YFR034C 939 nt8.72□□□□□ -1.01
SKI6P46948 RPP1BYDL130W 321 nt8.69□□□□□ -1.02
SKI6P46948 tP(UGG)O3tP(UGG)O3 72 nt8.68□□□□□ -1.02
SKI6P46948 SCC4YER147C 1875 nt8.67□□□□□ -1.02
SKI6P46948 RTF1YGL244W 1677 nt8.66□□□□□ -1.02
SKI6P46948 YDR095CYDR095C 411 nt8.66□□□□□ -1.02
SKI6P46948 INM2YDR287W 879 nt8.62□□□□□ -1.03
SKI6P46948 SCS3YGL126W 1143 nt8.62□□□□□ -1.03
SKI6P46948 CAC2YML102W 1407 nt8.58□□□□□ -1.04
SKI6P46948 YSC84YHR016C 1407 nt8.57□□□□□ -1.04
SKI6P46948 MCH5YOR306C 1566 nt8.54□□□□□ -1.04
SKI6P46948 BOP3YNL042W 1191 nt8.54□□□□□ -1.04
SKI6P46948 PTP1YDL230W 1008 nt8.52□□□□□ -1.05
SKI6P46948 PTK1YKL198C 1989 nt8.52□□□□□ -1.05
SKI6P46948 MOT3YMR070W 1473 nt8.51□□□□□ -1.05
SKI6P46948 RPP2AYOL039W 321 nt8.5□□□□□ -1.05
SKI6P46948 YHL050CYHL050C 2094 nt8.48□□□□□ -1.05
SKI6P46948 IRC15YPL017C 1500 nt8.48□□□□□ -1.05
SKI6P46948 GIS3YLR094C 1509 nt8.45□□□□□ -1.06
SKI6P46948 YDJ1YNL064C 1230 nt8.44□□□□□ -1.06
SKI6P46948 RPP2BYDR382W 333 nt8.43□□□□□ -1.06
SKI6P46948 YJR120WYJR120W 351 nt8.43□□□□□ -1.06
SKI6P46948 ALG12YNR030W 1656 nt8.4□□□□□ -1.06
SKI6P46948 PET122YER153C 765 nt8.38□□□□□ -1.07
SKI6P46948 YBL100CYBL100C 315 nt8.38□□□□□ -1.07
SKI6P46948 PKP1YIL042C 1185 nt8.34□□□□□ -1.07
SKI6P46948 GAR1YHR089C 618 nt8.33□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms