RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W YOL085CQ99345 113 aa3.48□□□□□ -1.85
PTC1YDL006W STF2P16965 84 aa3.47□□□□□ -1.85
PTC1YDL006W CKS1P20486 150 aaKnown RBP3.47□□□□□ -1.85
PTC1YDL006W RAD23P32628 398 aaKnown RBP3.47□□□□□ -1.85
PTC1YDL006W ERV15P38312 142 aa3.47□□□□□ -1.85
PTC1YDL006W CTR2P38865 189 aa3.47□□□□□ -1.85
PTC1YDL006W RRT13P40042 185 aa3.47□□□□□ -1.85
PTC1YDL006W PCL7P40186 285 aa3.47□□□□□ -1.85
PTC1YDL006W PIR5P46999 287 aa3.47□□□□□ -1.85
PTC1YDL006W COX16P47081 118 aa3.47□□□□□ -1.85
PTC1YDL006W JAC1P53193 184 aa3.47□□□□□ -1.85
PTC1YDL006W DID2P69771 204 aa3.47□□□□□ -1.85
PTC1YDL006W VPS28Q02767 242 aa3.47□□□□□ -1.85
PTC1YDL006W LPP1Q04396 274 aa3.47□□□□□ -1.85
PTC1YDL006W PAM18Q07914 168 aa3.47□□□□□ -1.85
PTC1YDL006W YOL118CQ08259 102 aa3.47□□□□□ -1.85
PTC1YDL006W YOR292CQ08743 309 aa3.47□□□□□ -1.85
PTC1YDL006W DGK1Q12382 290 aa3.47□□□□□ -1.85
PTC1YDL006W YLR146W-AQ2V2P1 62 aa3.47□□□□□ -1.85
PTC1YDL006W YIL002W-AQ3E7Z5 69 aa3.47□□□□□ -1.85
PTC1YDL006W HUG1Q6Q5K6 68 aa3.47□□□□□ -1.85
PTC1YDL006W YMR105W-AQ8TGS8 64 aa3.47□□□□□ -1.85
PTC1YDL006W APA2P22108 325 aa3.46□□□□□ -1.86
PTC1YDL006W ERG2P32352 222 aa3.46□□□□□ -1.86
PTC1YDL006W CPR5P35176 225 aa3.46□□□□□ -1.86
PTC1YDL006W IKI1P38874 309 aa3.46□□□□□ -1.86
PTC1YDL006W YIL012WP40551 113 aa3.46□□□□□ -1.86
PTC1YDL006W SDS23P53172 527 aa3.46□□□□□ -1.86
PTC1YDL006W PNC1P53184 216 aaKnown RBP3.46□□□□□ -1.86
PTC1YDL006W ACT1P60010 375 aaKnown RBP3.46□□□□□ -1.86
PTC1YDL006W YPL080CQ02826 108 aa3.46□□□□□ -1.86
PTC1YDL006W COA4Q05809 96 aa3.46□□□□□ -1.86
PTC1YDL006W RRT7Q07829 113 aa3.46□□□□□ -1.86
PTC1YDL006W HRD1Q08109 551 aa3.46□□□□□ -1.86
PTC1YDL006W FCF2Q12035 217 aaPredicted RBP3.46□□□□□ -1.86
PTC1YDL006W RTR2Q12378 196 aa3.46□□□□□ -1.86
PTC1YDL006W TFC7Q12415 435 aa3.46□□□□□ -1.86
PTC1YDL006W ATG31Q12421 196 aa3.46□□□□□ -1.86
PTC1YDL006W YGL194C-AQ2V2P6 80 aa3.46□□□□□ -1.86
PTC1YDL006W YCL048W-AQ2V2Q2 79 aa3.46□□□□□ -1.86
PTC1YDL006W UTP20P35194 2493 aaKnown RBP3.46□□□□□ -1.86
PTC1YDL006W ZRT1P32804 376 aa3.45□□□□□ -1.86
PTC1YDL006W RPS0AP32905 252 aaKnown RBP3.45□□□□□ -1.86
PTC1YDL006W YHR138CP38841 114 aaPredicted RBP3.45□□□□□ -1.86
PTC1YDL006W YIR020CP40575 100 aa3.45□□□□□ -1.86
PTC1YDL006W HIT1P46973 164 aa3.45□□□□□ -1.86
PTC1YDL006W YPD1Q07688 167 aa3.45□□□□□ -1.86
PTC1YDL006W CSI2Q08054 341 aa3.45□□□□□ -1.86
PTC1YDL006W GEP5Q12393 293 aa3.45□□□□□ -1.86
PTC1YDL006W RAX2Q12465 1220 aa3.45□□□□□ -1.86
PTC1YDL006W SEC22P22214 214 aa3.44□□□□□ -1.86
PTC1YDL006W ROX3P25046 220 aa3.44□□□□□ -1.86
PTC1YDL006W SRY1P36007 326 aa3.44□□□□□ -1.86
PTC1YDL006W CUE1P38428 203 aa3.44□□□□□ -1.86
PTC1YDL006W SNX4P47057 423 aa3.44□□□□□ -1.86
PTC1YDL006W TAD2P47058 250 aa3.44□□□□□ -1.86
PTC1YDL006W YJR012CP47087 207 aa3.44□□□□□ -1.86
PTC1YDL006W YJR111CP47148 283 aaKnown RBP3.44□□□□□ -1.86
PTC1YDL006W RPL9BP51401 191 aaKnown RBP3.44□□□□□ -1.86
PTC1YDL006W ERV25P54837 211 aaKnown RBP3.44□□□□□ -1.86
PTC1YDL006W ANT1Q06497 328 aa3.44□□□□□ -1.86
PTC1YDL006W ARR2Q06597 130 aa3.44□□□□□ -1.86
PTC1YDL006W BER1Q06688 274 aaKnown RBP3.44□□□□□ -1.86
PTC1YDL006W YOR029WQ12243 111 aa3.44□□□□□ -1.86
PTC1YDL006W YOS1Q3E834 85 aa3.44□□□□□ -1.86
PTC1YDL006W YAL067W-AQ8TGK6 75 aa3.44□□□□□ -1.86
PTC1YDL006W RPL9AP05738 191 aaKnown RBP3.43□□□□□ -1.86
PTC1YDL006W YMR31P19955 123 aa3.43□□□□□ -1.86
PTC1YDL006W ECM31P38122 312 aa3.43□□□□□ -1.86
PTC1YDL006W RTC3P38804 111 aaPredicted RBP3.43□□□□□ -1.86
PTC1YDL006W ASP1P38986 381 aaPredicted RBP3.43□□□□□ -1.86
PTC1YDL006W VMA7P39111 118 aa3.43□□□□□ -1.86
PTC1YDL006W GCV3P39726 170 aaPredicted RBP3.43□□□□□ -1.86
PTC1YDL006W YEA6P39953 335 aa3.43□□□□□ -1.86
PTC1YDL006W YMR090WQ04304 227 aaKnown RBP3.43□□□□□ -1.86
PTC1YDL006W UTP23Q12339 254 aaKnown RBP3.43□□□□□ -1.86
PTC1YDL006W Q0297Q9ZZV8 51 aa3.43□□□□□ -1.86
PTC1YDL006W YCL042WP25572 119 aa3.42□□□□□ -1.86
PTC1YDL006W CBT1P36038 271 aaPredicted RBP3.42□□□□□ -1.86
PTC1YDL006W AGX1P43567 385 aa3.42□□□□□ -1.86
PTC1YDL006W ORM1P53224 222 aa3.42□□□□□ -1.86
PTC1YDL006W ATG5Q12380 294 aa3.42□□□□□ -1.86
PTC1YDL006W AGC1Q12482 902 aa3.42□□□□□ -1.86
PTC1YDL006W FMP16Q12497 93 aa3.42□□□□□ -1.86
PTC1YDL006W BOL1Q3E793 110 aa3.42□□□□□ -1.86
PTC1YDL006W YHR213W-AQ8TGT4 77 aa3.42□□□□□ -1.86
PTC1YDL006W BPH1P25356 2167 aa3.42□□□□□ -1.86
PTC1YDL006W UBI4P0CG63 381 aaKnown RBP3.41□□□□□ -1.86
PTC1YDL006W URA5P13298 226 aaKnown RBP3.41□□□□□ -1.86
PTC1YDL006W PHO85P17157 305 aa3.41□□□□□ -1.86
PTC1YDL006W SLM6P38343 150 aa3.41□□□□□ -1.86
PTC1YDL006W RFC2P40348 353 aa3.41□□□□□ -1.86
PTC1YDL006W YJR056CP47115 236 aa3.41□□□□□ -1.86
PTC1YDL006W ARP3P47117 449 aaKnown RBP3.41□□□□□ -1.86
PTC1YDL006W PDR17P53844 350 aa3.41□□□□□ -1.86
PTC1YDL006W ADH6Q04894 360 aaKnown RBP3.41□□□□□ -1.86
PTC1YDL006W PBP4Q07362 185 aaKnown RBP3.41□□□□□ -1.86
PTC1YDL006W MRPL20P22354 195 aaPredicted RBP3.4□□□□□ -1.87
PTC1YDL006W RPL16BP26785 198 aaKnown RBP3.4□□□□□ -1.87
PTC1YDL006W SPS18P32572 300 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms