RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W FRQ1Q06389 190 aa3.15□□□□□ -1.9
PUB1YNL016W DGA1Q08650 418 aa3.15□□□□□ -1.9
PUB1YNL016W TIM22Q12328 207 aa3.15□□□□□ -1.9
PUB1YNL016W PST2Q12335 198 aaKnown RBP3.15□□□□□ -1.9
PUB1YNL016W MPD1Q12404 318 aaKnown RBP3.15□□□□□ -1.9
PUB1YNL016W IZH2Q12442 317 aa3.15□□□□□ -1.9
PUB1YNL016W RIB3Q99258 208 aa3.15□□□□□ -1.9
PUB1YNL016W PET9P18239 318 aaKnown RBP3.14□□□□□ -1.91
PUB1YNL016W SPO13P23624 291 aa3.14□□□□□ -1.91
PUB1YNL016W SMP1P38128 452 aa3.14□□□□□ -1.91
PUB1YNL016W YEA4P40004 342 aa3.14□□□□□ -1.91
PUB1YNL016W STB1P42845 420 aa3.14□□□□□ -1.91
PUB1YNL016W ARP3P47117 449 aaKnown RBP3.14□□□□□ -1.91
PUB1YNL016W YGL101WP53144 215 aa3.14□□□□□ -1.91
PUB1YNL016W FMP48P53233 369 aa3.14□□□□□ -1.91
PUB1YNL016W HRD1Q08109 551 aa3.14□□□□□ -1.91
PUB1YNL016W RPL2AP0CX45 254 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W RPL2BP0CX46 254 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W IRC22P40006 225 aa3.13□□□□□ -1.91
PUB1YNL016W APQ12P40532 138 aa3.13□□□□□ -1.91
PUB1YNL016W GLC8P41818 229 aa3.13□□□□□ -1.91
PUB1YNL016W MNN5P46982 586 aa3.13□□□□□ -1.91
PUB1YNL016W ALB1P47019 175 aaPredicted RBP3.13□□□□□ -1.91
PUB1YNL016W YGL262WP53054 175 aa3.13□□□□□ -1.91
PUB1YNL016W MDM34P53083 459 aa3.13□□□□□ -1.91
PUB1YNL016W LSM3P57743 89 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W TSA2Q04120 196 aa3.13□□□□□ -1.91
PUB1YNL016W PAL1Q05518 499 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W NEJ1Q06148 342 aa3.13□□□□□ -1.91
PUB1YNL016W YPR011CQ12251 326 aa3.13□□□□□ -1.91
PUB1YNL016W YPS3Q12303 508 aa3.13□□□□□ -1.91
PUB1YNL016W PRR2Q12310 699 aa3.13□□□□□ -1.91
PUB1YNL016W ATP14Q12349 124 aa3.13□□□□□ -1.91
PUB1YNL016W RPL21BQ12672 160 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W YCL021W-AQ96VH3 125 aa3.13□□□□□ -1.91
PUB1YNL016W CDC39P25655 2108 aaKnown RBP3.13□□□□□ -1.91
PUB1YNL016W STP22P25604 385 aa3.12□□□□□ -1.91
PUB1YNL016W SUI1P32911 108 aaKnown RBP3.12□□□□□ -1.91
PUB1YNL016W MEP2P41948 499 aa3.12□□□□□ -1.91
PUB1YNL016W RPA43P46669 326 aa3.12□□□□□ -1.91
PUB1YNL016W YJR015WP47090 510 aa3.12□□□□□ -1.91
PUB1YNL016W CCC1P47818 322 aa3.12□□□□□ -1.91
PUB1YNL016W SDT1P53078 280 aa3.12□□□□□ -1.91
PUB1YNL016W ACT1P60010 375 aaKnown RBP3.12□□□□□ -1.91
PUB1YNL016W GRH1Q04410 372 aaKnown RBP3.12□□□□□ -1.91
PUB1YNL016W MRX8Q05473 314 aa3.12□□□□□ -1.91
PUB1YNL016W YER078W-AQ3E7A2 54 aa3.12□□□□□ -1.91
PUB1YNL016W YBL112CQ3E7Y4 105 aa3.12□□□□□ -1.91
PUB1YNL016W HTL1Q9URQ5 78 aa3.12□□□□□ -1.91
PUB1YNL016W YCR043CP25361 127 aa3.12□□□□□ -1.91
PUB1YNL016W RPC19P28000 142 aaKnown RBP3.12□□□□□ -1.91
PUB1YNL016W OCH1P31755 480 aa3.12□□□□□ -1.91
PUB1YNL016W SKI6P46948 246 aaPredicted RBP3.12□□□□□ -1.91
PUB1YNL016W YJL028WP47062 111 aa3.12□□□□□ -1.91
PUB1YNL016W SOL1P50278 321 aa3.12□□□□□ -1.91
PUB1YNL016W SWT21P53873 357 aaPredicted RBP3.12□□□□□ -1.91
PUB1YNL016W RUB1Q03919 77 aa3.12□□□□□ -1.91
PUB1YNL016W IRC25Q07951 179 aa3.12□□□□□ -1.91
PUB1YNL016W YDL180WQ12301 547 aa3.12□□□□□ -1.91
PUB1YNL016W ATG5Q12380 294 aa3.12□□□□□ -1.91
PUB1YNL016W YOR304C-AO14468 76 aa3.11□□□□□ -1.91
PUB1YNL016W SEC17P32602 292 aa3.11□□□□□ -1.91
PUB1YNL016W ASK1P35734 292 aa3.11□□□□□ -1.91
PUB1YNL016W UTP30P36144 274 aaKnown RBP3.11□□□□□ -1.91
PUB1YNL016W POP4P38336 279 aa3.11□□□□□ -1.91
PUB1YNL016W RPF1P38805 295 aaKnown RBP3.11□□□□□ -1.91
PUB1YNL016W REE1P40893 198 aa3.11□□□□□ -1.91
PUB1YNL016W ECO1P43605 281 aa3.11□□□□□ -1.91
PUB1YNL016W BOL2P53082 120 aa3.11□□□□□ -1.91
PUB1YNL016W YGL088WP53151 121 aa3.11□□□□□ -1.91
PUB1YNL016W ORM1P53224 222 aa3.11□□□□□ -1.91
PUB1YNL016W HHT1P61830 136 aa3.11□□□□□ -1.91
PUB1YNL016W YPL039WQ03080 316 aa3.11□□□□□ -1.91
PUB1YNL016W YMD8Q03697 442 aa3.11□□□□□ -1.91
PUB1YNL016W FMN1Q03778 218 aa3.11□□□□□ -1.91
PUB1YNL016W LPP1Q04396 274 aa3.11□□□□□ -1.91
PUB1YNL016W SDH7Q04401 133 aa3.11□□□□□ -1.91
PUB1YNL016W API2Q04413 109 aa3.11□□□□□ -1.91
PUB1YNL016W YPR174CQ06616 221 aaPredicted RBP3.11□□□□□ -1.91
PUB1YNL016W NIP7Q08962 181 aaKnown RBP3.11□□□□□ -1.91
PUB1YNL016W SMT3Q12306 101 aaKnown RBP3.11□□□□□ -1.91
PUB1YNL016W TSC3Q3E790 80 aa3.11□□□□□ -1.91
PUB1YNL016W YPR014CQ6B0W2 109 aa3.11□□□□□ -1.91
PUB1YNL016W TDA8Q6B2U8 126 aa3.11□□□□□ -1.91
PUB1YNL016W YOR032W-AQ8TGS1 66 aa3.11□□□□□ -1.91
PUB1YNL016W SLH1P53327 1967 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W HSP30P25619 332 aa3.1□□□□□ -1.91
PUB1YNL016W UTP11P34247 250 aaPredicted RBP3.1□□□□□ -1.91
PUB1YNL016W PTH1P38876 190 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W AST2P39945 430 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W HPM1P40481 377 aa3.1□□□□□ -1.91
PUB1YNL016W SYS1P41544 203 aa3.1□□□□□ -1.91
PUB1YNL016W MIC19P43594 170 aa3.1□□□□□ -1.91
PUB1YNL016W GPI14P47088 403 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W RPL21AQ02753 160 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W ARL3Q02804 198 aa3.1□□□□□ -1.91
PUB1YNL016W COF1Q03048 143 aaKnown RBP3.1□□□□□ -1.91
PUB1YNL016W GAS3Q03655 524 aa3.1□□□□□ -1.91
PUB1YNL016W INP1Q03694 420 aa3.1□□□□□ -1.91
PUB1YNL016W THI74Q04083 370 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms