RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C MSY1P48527 492 aa2.97□□□□□ -1.93
SHH3YMR118C MIC26P50087 233 aa2.97□□□□□ -1.93
SHH3YMR118C THG1P53215 237 aaKnown RBP2.97□□□□□ -1.93
SHH3YMR118C CRH1P53301 507 aa2.97□□□□□ -1.93
SHH3YMR118C YMR007WQ03675 126 aa2.97□□□□□ -1.93
SHH3YMR118C LOA1Q06508 300 aa2.97□□□□□ -1.93
SHH3YMR118C PRP11Q07350 266 aaPredicted RBP2.97□□□□□ -1.93
SHH3YMR118C YFH1Q07540 174 aa2.97□□□□□ -1.93
SHH3YMR118C LDS2Q08218 356 aa2.97□□□□□ -1.93
SHH3YMR118C RDL2Q08742 149 aaKnown RBP2.97□□□□□ -1.93
SHH3YMR118C YDL157CQ12082 118 aa2.97□□□□□ -1.93
SHH3YMR118C USB1Q12208 290 aaKnown RBP2.97□□□□□ -1.93
SHH3YMR118C PRP46Q12417 451 aaPredicted RBP2.97□□□□□ -1.93
SHH3YMR118C YBR255C-AQ3E776 120 aa2.97□□□□□ -1.93
SHH3YMR118C YLR422WQ06409 1932 aa2.97□□□□□ -1.93
SHH3YMR118C RPL11AP0C0W9 174 aaKnown RBP2.96□□□□□ -1.94
SHH3YMR118C YCR007CP25354 239 aa2.96□□□□□ -1.94
SHH3YMR118C IMG1P25626 169 aa2.96□□□□□ -1.94
SHH3YMR118C PMU1P36069 295 aa2.96□□□□□ -1.94
SHH3YMR118C SWD3P38123 315 aa2.96□□□□□ -1.94
SHH3YMR118C MOH1P38191 138 aa2.96□□□□□ -1.94
SHH3YMR118C DER1P38307 211 aa2.96□□□□□ -1.94
SHH3YMR118C RPF1P38805 295 aaKnown RBP2.96□□□□□ -1.94
SHH3YMR118C PFS1P38872 237 aa2.96□□□□□ -1.94
SHH3YMR118C SRP14P38985 146 aa2.96□□□□□ -1.94
SHH3YMR118C TEM1P38987 245 aa2.96□□□□□ -1.94
SHH3YMR118C YER188WP40103 239 aa2.96□□□□□ -1.94
SHH3YMR118C TIF34P40217 347 aaKnown RBP2.96□□□□□ -1.94
SHH3YMR118C YIL169CP40442 995 aa2.96□□□□□ -1.94
SHH3YMR118C PRM5P40476 318 aa2.96□□□□□ -1.94
SHH3YMR118C LCL3P53153 274 aa2.96□□□□□ -1.94
SHH3YMR118C YGR050CP53231 118 aa2.96□□□□□ -1.94
SHH3YMR118C YMR210WQ03649 449 aa2.96□□□□□ -1.94
SHH3YMR118C YMR166CQ03829 368 aa2.96□□□□□ -1.94
SHH3YMR118C UPS3Q04006 179 aa2.96□□□□□ -1.94
SHH3YMR118C GIM5Q04493 163 aa2.96□□□□□ -1.94
SHH3YMR118C ARR3Q06598 404 aa2.96□□□□□ -1.94
SHH3YMR118C RFU1Q08003 200 aa2.96□□□□□ -1.94
SHH3YMR118C YOR292CQ08743 309 aa2.96□□□□□ -1.94
SHH3YMR118C YPL162CQ12042 273 aa2.96□□□□□ -1.94
SHH3YMR118C SWT1Q12104 458 aa2.96□□□□□ -1.94
SHH3YMR118C USV1Q12132 391 aa2.96□□□□□ -1.94
SHH3YMR118C RPL11BQ3E757 174 aaPredicted RBP2.96□□□□□ -1.94
SHH3YMR118C RPS22BQ3E7Y3 130 aaKnown RBP2.96□□□□□ -1.94
SHH3YMR118C ATG40Q99325 256 aa2.96□□□□□ -1.94
SHH3YMR118C SOD1P00445 154 aaKnown RBP2.95□□□□□ -1.94
SHH3YMR118C ADE8P04161 214 aa2.95□□□□□ -1.94
SHH3YMR118C YPR170W-BP0C5R9 85 aa2.95□□□□□ -1.94
SHH3YMR118C DDI2P0CH63 225 aa2.95□□□□□ -1.94
SHH3YMR118C DDI3P0CH64 225 aa2.95□□□□□ -1.94
SHH3YMR118C MSI1P13712 422 aa2.95□□□□□ -1.94
SHH3YMR118C CWP1P28319 239 aa2.95□□□□□ -1.94
SHH3YMR118C SRP21P32342 167 aa2.95□□□□□ -1.94
SHH3YMR118C PAM17P36147 197 aa2.95□□□□□ -1.94
SHH3YMR118C UBS1P38290 277 aa2.95□□□□□ -1.94
SHH3YMR118C YBR184WP38299 523 aa2.95□□□□□ -1.94
SHH3YMR118C NTC20P38302 140 aaPredicted RBP2.95□□□□□ -1.94
SHH3YMR118C BAT1P38891 393 aaKnown RBP2.95□□□□□ -1.94
SHH3YMR118C PCL7P40186 285 aa2.95□□□□□ -1.94
SHH3YMR118C YIL086CP40503 102 aa2.95□□□□□ -1.94
SHH3YMR118C DFG10P40526 253 aa2.95□□□□□ -1.94
SHH3YMR118C CIS3P47001 227 aa2.95□□□□□ -1.94
SHH3YMR118C YJL028WP47062 111 aa2.95□□□□□ -1.94
SHH3YMR118C TRM9P49957 279 aa2.95□□□□□ -1.94
SHH3YMR118C YIP5P53108 310 aa2.95□□□□□ -1.94
SHH3YMR118C YNR061CP53747 219 aa2.95□□□□□ -1.94
SHH3YMR118C SWS2P53937 143 aa2.95□□□□□ -1.94
SHH3YMR118C CGI121Q03705 181 aaKnown RBP2.95□□□□□ -1.94
SHH3YMR118C RIM9Q04734 239 aa2.95□□□□□ -1.94
SHH3YMR118C YMR254CQ04838 102 aa2.95□□□□□ -1.94
SHH3YMR118C YFT2Q06676 274 aa2.95□□□□□ -1.94
SHH3YMR118C HRD1Q08109 551 aa2.95□□□□□ -1.94
SHH3YMR118C YOL118CQ08259 102 aa2.95□□□□□ -1.94
SHH3YMR118C YCR024C-BQ3E7Z8 88 aa2.95□□□□□ -1.94
SHH3YMR118C SAL1D6W196 494 aa2.94□□□□□ -1.94
SHH3YMR118C YER190C-BP0CX94 160 aa2.94□□□□□ -1.94
SHH3YMR118C YEL077W-AP0CX95 160 aa2.94□□□□□ -1.94
SHH3YMR118C YGR296C-BP0CX96 160 aa2.94□□□□□ -1.94
SHH3YMR118C YPL283W-BP0CX97 160 aa2.94□□□□□ -1.94
SHH3YMR118C YPR204C-AP0CX98 160 aa2.94□□□□□ -1.94
SHH3YMR118C HMRA1P0CY11 126 aa2.94□□□□□ -1.94
SHH3YMR118C CUP2P15315 225 aa2.94□□□□□ -1.94
SHH3YMR118C GSP1P32835 219 aaKnown RBP2.94□□□□□ -1.94
SHH3YMR118C GSP2P32836 220 aaKnown RBP2.94□□□□□ -1.94
SHH3YMR118C MTR2P34232 184 aaKnown RBP2.94□□□□□ -1.94
SHH3YMR118C PHD1P36093 366 aa2.94□□□□□ -1.94
SHH3YMR118C PRY2P36110 329 aa2.94□□□□□ -1.94
SHH3YMR118C UME6P39001 836 aa2.94□□□□□ -1.94
SHH3YMR118C YER079WP40052 210 aaKnown RBP2.94□□□□□ -1.94
SHH3YMR118C SHO1P40073 367 aa2.94□□□□□ -1.94
SHH3YMR118C YIL163CP40448 117 aa2.94□□□□□ -1.94
SHH3YMR118C YIL029CP40538 142 aa2.94□□□□□ -1.94
SHH3YMR118C MSL1P40567 111 aaPredicted RBP2.94□□□□□ -1.94
SHH3YMR118C ARP3P47117 449 aaKnown RBP2.94□□□□□ -1.94
SHH3YMR118C DSK2P48510 373 aa2.94□□□□□ -1.94
SHH3YMR118C YGL230CP53074 147 aa2.94□□□□□ -1.94
SHH3YMR118C YNR064CP53750 290 aa2.94□□□□□ -1.94
SHH3YMR118C BOR1P53838 576 aa2.94□□□□□ -1.94
SHH3YMR118C TRS23Q03784 219 aa2.94□□□□□ -1.94
SHH3YMR118C IZH3Q07959 543 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms