RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	YER079W	P40052	210 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	GLE2	P40066	365 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TIF34	P40217	347 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	AVT7	P40501	490 aa		0.97	□□□□□ -2.25
APL1	YJR005W	FIS1	P40515	155 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SYS1	P41544	203 aa		0.97	□□□□□ -2.25
APL1	YJR005W	VMA21	P41806	77 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CWP2	P43497	92 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YFL065C	P43539	102 aa		0.97	□□□□□ -2.25
APL1	YJR005W	MOB2	P43563	287 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YFR045W	P43617	309 aa		0.97	□□□□□ -2.25
APL1	YJR005W	LCB3	P47013	409 aa		0.97	□□□□□ -2.25
APL1	YJR005W	VEL1	P53058	206 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YGL230C	P53074	147 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YGR015C	P53208	328 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CAB4	P53332	305 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YNL095C	P53932	642 aa		0.97	□□□□□ -2.25
APL1	YJR005W	AIM11	P87275	137 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CDC14	Q00684	551 aa		0.97	□□□□□ -2.25
APL1	YJR005W	MRX11	Q03079	207 aa		0.97	□□□□□ -2.25
APL1	YJR005W	RCE1	Q03530	315 aa		0.97	□□□□□ -2.25
APL1	YJR005W	BET5	Q03630	159 aa		0.97	□□□□□ -2.25
APL1	YJR005W	VBA1	Q04301	562 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YMR310C	Q04867	317 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	FCF1	Q05498	189 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YPR114W	Q06107	315 aa		0.97	□□□□□ -2.25
APL1	YJR005W	NAT3	Q06504	195 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SWC7	Q06707	132 aa		0.97	□□□□□ -2.25
APL1	YJR005W	ASA1	Q06822	443 aa		0.97	□□□□□ -2.25
APL1	YJR005W	MMT2	Q08970	484 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YPR203W	Q08994	102 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YPL245W	Q12179	454 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YGK3	Q12222	375 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YLR126C	Q12288	251 aa		0.97	□□□□□ -2.25
APL1	YJR005W	UTP23	Q12339	254 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	PEX11	Q12462	236 aa		0.97	□□□□□ -2.25
APL1	YJR005W	HUT1	Q12520	339 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YPR145C-A	Q2V2P0	78 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YDL007C-A	Q2V2Q0	85 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SPO24	Q3E752	67 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YNR034W-A	Q3E841	98 aa		0.97	□□□□□ -2.25
APL1	YJR005W	DNF2	Q12675	1612 aa		0.97	□□□□□ -2.25
APL1	YJR005W	UBR1	P19812	1950 aa		0.97	□□□□□ -2.25
APL1	YJR005W	ARO1	P08566	1588 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	HIS1	P00498	297 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	RPL28	P02406	149 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	MSW1	P04803	379 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SIR2	P06700	562 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CPA1	P07258	411 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	MRS1	P07266	363 aa		0.97	□□□□□ -2.25
APL1	YJR005W	RPS25B	P0C0T4	108 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YPR170W-B	P0C5R9	85 aa		0.97	□□□□□ -2.25
APL1	YJR005W	PBI2	P0CT04	75 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected
APL1	YJR005W	CLB6	P32943	380 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YKR070W	P36151	352 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YBR063C	P38083	404 aa		0.97	□□□□□ -2.25
APL1	YJR005W	GPX2	P38143	162 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YBR090C	P38253	122 aa		0.97	□□□□□ -2.25
APL1	YJR005W	GEP4	P38812	185 aa		0.97	□□□□□ -2.25
APL1	YJR005W	RPB11	P38902	120 aa		0.97	□□□□□ -2.25
APL1	YJR005W	LYS1	P38998	373 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
APL1	YJR005W	HMF1	P40037	129 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	APQ12	P40532	138 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YIL012W	P40551	113 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CAT5	P41735	233 aa		0.97	□□□□□ -2.25
APL1	YJR005W	PFS2	P42841	465 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	PAM16	P42949	149 aa		0.97	□□□□□ -2.25
APL1	YJR005W	EAF6	P47128	113 aa		0.97	□□□□□ -2.25
APL1	YJR005W	HMS2	P47175	358 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SBH1	P52870	82 aa		0.97	□□□□□ -2.25
APL1	YJR005W	PDR17	P53844	350 aa		0.97	□□□□□ -2.25
APL1	YJR005W	CYT2	Q00873	224 aa		0.97	□□□□□ -2.25
APL1	YJR005W	SDC1	Q03323	175 aa		0.97	□□□□□ -2.25
APL1	YJR005W	UTP15	Q04305	513 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	ARC18	Q05933	178 aa	Known RBP	0.97	□□□□□ -2.25
APL1	YJR005W	YPR174C	Q06616	221 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	CTR3	Q06686	241 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YOL024W	Q08172	172 aa		0.97	□□□□□ -2.25
APL1	YJR005W	HRT1	Q08273	121 aa		0.97	□□□□□ -2.25
APL1	YJR005W	YDR029W	Q12111	104 aa		0.97	□□□□□ -2.25
APL1	YJR005W	RPS25A	Q3E792	108 aa	Predicted RBP	0.97	□□□□□ -2.25
APL1	YJR005W	VMA9	Q3E7B6	73 aa		0.97	□□□□□ -2.25
APL1	YJR005W	MED11	Q99278	115 aa		0.97	□□□□□ -2.25
APL1	YJR005W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	TY4B-J	P47024	1803 aa		0.96	□□□□□ -2.26
APL1	YJR005W	TY3B-G	Q99315	1547 aa		0.96	□□□□□ -2.26
APL1	YJR005W	RIF1	P29539	1916 aa		0.96	□□□□□ -2.26
APL1	YJR005W	ADH1	P00330	348 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	RIP1	P08067	215 aa		0.96	□□□□□ -2.26
APL1	YJR005W	RPL2A	P0CX45	254 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	RPL2B	P0CX46	254 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	UBC5	P15732	148 aa		0.96	□□□□□ -2.26
APL1	YJR005W	MRPL20	P22354	195 aa	Predicted RBP	0.96	□□□□□ -2.26
APL1	YJR005W	YGL010W	P25338	174 aa		0.96	□□□□□ -2.26
APL1	YJR005W	YCR090C	P25654	182 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	MIG1	P27705	504 aa		0.96	□□□□□ -2.26
APL1	YJR005W	ACB1	P31787	87 aa		0.96	□□□□□ -2.26
APL1	YJR005W	SOR1	P35497	357 aa	Known RBP	0.96	□□□□□ -2.26
APL1	YJR005W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 97 ms