RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W CAF20P12962 161 aaKnown RBP7□□□□□ -1.29
SSO1YPL232W DSD1P53095 428 aa7□□□□□ -1.29
SSO1YPL232W MSM1P22438 575 aa6.99□□□□□ -1.29
SSO1YPL232W RTG3P38165 486 aa6.99□□□□□ -1.29
SSO1YPL232W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
SSO1YPL232W NCS6P53088 359 aa6.99□□□□□ -1.29
SSO1YPL232W EMP47P43555 445 aa6.98□□□□□ -1.29
SSO1YPL232W UBP16Q02863 499 aa6.98□□□□□ -1.29
SSO1YPL232W VPS13Q07878 3144 aa6.98□□□□□ -1.29
SSO1YPL232W HVG1P0CE11 249 aa6.97□□□□□ -1.29
SSO1YPL232W SCY1P53009 804 aa6.97□□□□□ -1.29
SSO1YPL232W DPL1Q05567 589 aa6.97□□□□□ -1.29
SSO1YPL232W AIM7Q12156 149 aa6.97□□□□□ -1.29
SSO1YPL232W RIM101P33400 625 aa6.96□□□□□ -1.3
SSO1YPL232W BSD2P38356 321 aa6.96□□□□□ -1.3
SSO1YPL232W YGL082WP53155 381 aa6.96□□□□□ -1.3
SSO1YPL232W CWC15Q03772 175 aaKnown RBP6.96□□□□□ -1.3
SSO1YPL232W YGR117CP53270 476 aa6.95□□□□□ -1.3
SSO1YPL232W PAM1P37304 830 aaKnown RBP6.94□□□□□ -1.3
SSO1YPL232W MAL31P38156 614 aa6.94□□□□□ -1.3
SSO1YPL232W TIF4632P39936 914 aaKnown RBP6.94□□□□□ -1.3
SSO1YPL232W ALE1Q08548 619 aa6.94□□□□□ -1.3
SSO1YPL232W KAR2P16474 682 aaKnown RBP6.93□□□□□ -1.3
SSO1YPL232W KCC4P25389 1037 aa6.93□□□□□ -1.3
SSO1YPL232W TRM44Q02648 567 aaKnown RBP6.93□□□□□ -1.3
SSO1YPL232W SAS4Q04003 481 aa6.93□□□□□ -1.3
SSO1YPL232W CST9Q06032 482 aa6.93□□□□□ -1.3
SSO1YPL232W AOS1Q06624 347 aa6.93□□□□□ -1.3
SSO1YPL232W SSP2Q08646 371 aa6.93□□□□□ -1.3
SSO1YPL232W ARG8P18544 423 aa6.92□□□□□ -1.3
SSO1YPL232W FRD1P32614 470 aaKnown RBP6.92□□□□□ -1.3
SSO1YPL232W SLX5P32828 619 aaKnown RBP6.92□□□□□ -1.3
SSO1YPL232W AKL1P38080 1108 aaKnown RBP6.92□□□□□ -1.3
SSO1YPL232W RPN1P38764 993 aaKnown RBP6.92□□□□□ -1.3
SSO1YPL232W SYF1Q04048 859 aaPredicted RBP6.92□□□□□ -1.3
SSO1YPL232W CSR2Q12734 1121 aa6.92□□□□□ -1.3
SSO1YPL232W SSK22P25390 1331 aaPredicted RBP6.92□□□□□ -1.3
SSO1YPL232W MOT2P34909 587 aaKnown RBP6.91□□□□□ -1.3
SSO1YPL232W VPS4P52917 437 aa6.91□□□□□ -1.3
SSO1YPL232W LYS2P07702 1392 aa6.91□□□□□ -1.3
SSO1YPL232W HPR1P17629 752 aaKnown RBP6.9□□□□□ -1.3
SSO1YPL232W STV1P37296 890 aa6.9□□□□□ -1.3
SSO1YPL232W YPR117WQ06116 2489 aa6.9□□□□□ -1.31
SSO1YPL232W PCS60P38137 543 aaKnown RBP RIP-Chip data6.89□□□□□ -1.31not detected
SSO1YPL232W SET4P42948 560 aa6.89□□□□□ -1.31
SSO1YPL232W RRT6P53117 311 aaPredicted RBP6.89□□□□□ -1.31
SSO1YPL232W RSC30P38781 883 aa6.88□□□□□ -1.31
SSO1YPL232W HAT1Q12341 374 aa6.88□□□□□ -1.31
SSO1YPL232W NTH2P35172 780 aa6.87□□□□□ -1.31
SSO1YPL232W APE3P37302 537 aaKnown RBP6.87□□□□□ -1.31
SSO1YPL232W TGL3P40308 642 aa6.87□□□□□ -1.31
SSO1YPL232W CRF1Q04930 467 aa6.87□□□□□ -1.31
SSO1YPL232W PNT1P38969 423 aa6.86□□□□□ -1.31
SSO1YPL232W YPR204WQ08995 1032 aa6.86□□□□□ -1.31
SSO1YPL232W AFG2P32794 780 aa6.85□□□□□ -1.31
SSO1YPL232W BCH2P36122 765 aa6.85□□□□□ -1.31
SSO1YPL232W GAS5Q08193 484 aa6.85□□□□□ -1.31
SSO1YPL232W TAO3P40468 2376 aa6.84□□□□□ -1.31
SSO1YPL232W UGA3P26370 528 aa6.84□□□□□ -1.31
SSO1YPL232W PAP2P53632 584 aaKnown RBP6.84□□□□□ -1.31
SSO1YPL232W RRG1Q12167 365 aaPredicted RBP6.84□□□□□ -1.31
SSO1YPL232W FLO11P08640 1367 aa6.83□□□□□ -1.32
SSO1YPL232W APL2P36000 726 aaPredicted RBP6.83□□□□□ -1.32
SSO1YPL232W YVH1Q02256 364 aaKnown RBP6.83□□□□□ -1.32
SSO1YPL232W RBA50Q04418 439 aa6.83□□□□□ -1.32
SSO1YPL232W NSR1P27476 414 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SSO1YPL232W TRP5P00931 707 aaKnown RBP6.8□□□□□ -1.32
SSO1YPL232W CBP1P07252 654 aa6.8□□□□□ -1.32
SSO1YPL232W SIS1P25294 352 aaKnown RBP6.8□□□□□ -1.32
SSO1YPL232W KRE2P27809 442 aa6.8□□□□□ -1.32
SSO1YPL232W UBX2Q04228 584 aa6.8□□□□□ -1.32
SSO1YPL232W DUR1,2P32528 1835 aaKnown RBP6.79□□□□□ -1.32
SSO1YPL232W PSD2P53037 1138 aaKnown RBP6.79□□□□□ -1.32
SSO1YPL232W NSE3Q05541 303 aa6.79□□□□□ -1.32
SSO1YPL232W UBP9P39967 754 aa6.78□□□□□ -1.32
SSO1YPL232W SGD1Q06132 899 aa6.78□□□□□ -1.32
SSO1YPL232W FBP1P09201 348 aa6.77□□□□□ -1.33
SSO1YPL232W TRK1P12685 1235 aa6.77□□□□□ -1.33
SSO1YPL232W UTP7P40055 554 aaKnown RBP6.77□□□□□ -1.33
SSO1YPL232W SEN54Q02825 467 aaPredicted RBP6.77□□□□□ -1.33
SSO1YPL232W VPS64Q03944 604 aa6.77□□□□□ -1.33
SSO1YPL232W PDS5Q04264 1277 aa6.77□□□□□ -1.33
SSO1YPL232W YLR225CQ05948 407 aaKnown RBP6.77□□□□□ -1.33
SSO1YPL232W DPH6Q12429 685 aa6.77□□□□□ -1.33
SSO1YPL232W ASH1P34233 588 aa6.76□□□□□ -1.33
SSO1YPL232W ICP55P40051 511 aa6.76□□□□□ -1.33
SSO1YPL232W CLA4P48562 842 aa6.76□□□□□ -1.33
SSO1YPL232W YLR271WQ06152 274 aa6.76□□□□□ -1.33
SSO1YPL232W PAH1P32567 862 aa6.75□□□□□ -1.33
SSO1YPL232W SPL2P38839 148 aa6.75□□□□□ -1.33
SSO1YPL232W GSM1P42950 618 aa6.75□□□□□ -1.33
SSO1YPL232W YNL050CP53952 270 aa6.75□□□□□ -1.33
SSO1YPL232W ZDS2P54786 942 aa6.75□□□□□ -1.33
SSO1YPL232W JIP4Q03361 876 aa6.75□□□□□ -1.33
SSO1YPL232W FLO1P32768 1537 aa6.75□□□□□ -1.33
SSO1YPL232W DLD1P32891 587 aa6.74□□□□□ -1.33
SSO1YPL232W MTC3P53077 123 aa6.74□□□□□ -1.33
SSO1YPL232W RPT4P53549 437 aaKnown RBP6.74□□□□□ -1.33
SSO1YPL232W PRP42Q03776 544 aaKnown RBP6.74□□□□□ -1.33
SSO1YPL232W GAL2P13181 574 aa6.73□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms