RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W ORC6P38826 435 aa2.54□□□□□ -2
HER1YOR227W PCS60P38137 543 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
HER1YOR227W RSC30P38781 883 aa2.54□□□□□ -2
HER1YOR227W VHR2P40041 505 aa2.54□□□□□ -2
HER1YOR227W SVL3Q03088 825 aaKnown RBP2.54□□□□□ -2
HER1YOR227W SOL3P38858 249 aa2.54□□□□□ -2
HER1YOR227W YJR107WP47145 328 aa2.54□□□□□ -2
HER1YOR227W CWC15Q03772 175 aaKnown RBP2.54□□□□□ -2
HER1YOR227W SEC8P32855 1065 aa2.53□□□□□ -2
HER1YOR227W TOM20P35180 183 aa2.53□□□□□ -2
HER1YOR227W NST1P53935 1240 aa2.53□□□□□ -2
HER1YOR227W NIS1P53939 407 aa2.53□□□□□ -2
HER1YOR227W YOL098CQ12496 1037 aa2.53□□□□□ -2
HER1YOR227W GRX4P32642 244 aa2.53□□□□□ -2
HER1YOR227W STM1P39015 273 aaKnown RBP2.53□□□□□ -2
HER1YOR227W NNF1P47149 201 aa2.53□□□□□ -2
HER1YOR227W ALD3P54114 506 aa2.53□□□□□ -2
HER1YOR227W GAP1P19145 602 aaPredicted RBP2.53□□□□□ -2.01
HER1YOR227W RGR1P19263 1082 aa2.53□□□□□ -2.01
HER1YOR227W ASF1P32447 279 aa2.53□□□□□ -2.01
HER1YOR227W ISW1P38144 1129 aa2.53□□□□□ -2.01
HER1YOR227W YHL050CP38721 697 aa2.53□□□□□ -2.01
HER1YOR227W YHR219WP38900 624 aa2.53□□□□□ -2.01
HER1YOR227W ZDS1P50111 915 aaKnown RBP2.53□□□□□ -2.01
HER1YOR227W VPS72Q03388 795 aa2.53□□□□□ -2.01
HER1YOR227W YEL077CQ3E7X8 1277 aa2.53□□□□□ -2.01
HER1YOR227W SCJ1P25303 377 aa2.52□□□□□ -2.01
HER1YOR227W MET4P32389 672 aa2.52□□□□□ -2.01
HER1YOR227W GTT3P39996 337 aa2.52□□□□□ -2.01
HER1YOR227W POL32P47110 350 aa2.52□□□□□ -2.01
HER1YOR227W RAD59Q12223 238 aa2.52□□□□□ -2.01
HER1YOR227W YJU3P28321 313 aa2.52□□□□□ -2.01
HER1YOR227W YBL036CP38197 257 aa2.52□□□□□ -2.01
HER1YOR227W ALG12P53730 551 aa2.52□□□□□ -2.01
HER1YOR227W MNL2Q12205 849 aa2.52□□□□□ -2.01
HER1YOR227W FRT1Q99332 602 aa2.52□□□□□ -2.01
HER1YOR227W MAK16P10962 306 aaPredicted RBP2.52□□□□□ -2.01
HER1YOR227W PPH3P32345 308 aa2.51□□□□□ -2.01
HER1YOR227W PPX1P38698 397 aa2.51□□□□□ -2.01
HER1YOR227W BOL3P39724 118 aa2.51□□□□□ -2.01
HER1YOR227W HST2P53686 357 aa2.51□□□□□ -2.01
HER1YOR227W CSE4P36012 229 aa2.51□□□□□ -2.01
HER1YOR227W FYV10P40492 516 aa2.51□□□□□ -2.01
HER1YOR227W KRI1P42846 591 aaKnown RBP2.51□□□□□ -2.01
HER1YOR227W YMR1P47147 688 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
HER1YOR227W CTH1P47976 325 aa2.51□□□□□ -2.01
HER1YOR227W RTF1P53064 558 aa2.51□□□□□ -2.01
HER1YOR227W FPK1P53739 893 aa2.51□□□□□ -2.01
HER1YOR227W OYE2Q03558 400 aaKnown RBP2.51□□□□□ -2.01
HER1YOR227W SVF1Q05515 481 aa2.51□□□□□ -2.01
HER1YOR227W MTO1P53070 669 aa2.51□□□□□ -2.01
HER1YOR227W RPN4Q03465 531 aa2.51□□□□□ -2.01
HER1YOR227W DBP1P24784 617 aaKnown RBP2.5□□□□□ -2.01
HER1YOR227W GPI13Q07830 1017 aa2.5□□□□□ -2.01
HER1YOR227W PPM2Q08282 695 aa2.5□□□□□ -2.01
HER1YOR227W SSF2Q12153 453 aaPredicted RBP2.5□□□□□ -2.01
HER1YOR227W LYS2P07702 1392 aa2.5□□□□□ -2.01
HER1YOR227W ESS1P22696 170 aa2.5□□□□□ -2.01
HER1YOR227W SEC20P28791 383 aa2.5□□□□□ -2.01
HER1YOR227W YKR075CP36155 307 aa2.5□□□□□ -2.01
HER1YOR227W TEA1P47988 759 aa2.5□□□□□ -2.01
HER1YOR227W TSR4P25040 408 aa2.5□□□□□ -2.01
HER1YOR227W MET1P36150 593 aa2.5□□□□□ -2.01
HER1YOR227W NPR2P39923 615 aa2.5□□□□□ -2.01
HER1YOR227W VAC8P39968 578 aa2.5□□□□□ -2.01
HER1YOR227W RPL34BP40525 121 aaKnown RBP2.5□□□□□ -2.01
HER1YOR227W YOL057WQ08225 711 aa2.5□□□□□ -2.01
HER1YOR227W SIT4P20604 311 aa2.49□□□□□ -2.01
HER1YOR227W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
HER1YOR227W TPM2P40414 161 aa2.49□□□□□ -2.01
HER1YOR227W MVP1P40959 511 aaKnown RBP2.49□□□□□ -2.01
HER1YOR227W SUB1P54000 292 aaKnown RBP2.49□□□□□ -2.01
HER1YOR227W RPA135P22138 1203 aaKnown RBP2.49□□□□□ -2.01
HER1YOR227W YGR273CP53329 174 aa2.49□□□□□ -2.01
HER1YOR227W NUT2Q06213 157 aa2.49□□□□□ -2.01
HER1YOR227W BRE1Q07457 700 aaKnown RBP2.49□□□□□ -2.01
HER1YOR227W ECM23Q02710 187 aa2.48□□□□□ -2.01
HER1YOR227W VPS16Q03308 798 aa2.48□□□□□ -2.01
HER1YOR227W FOX2Q02207 900 aaKnown RBP2.48□□□□□ -2.01
HER1YOR227W PUF6Q04373 656 aaKnown RBP2.48□□□□□ -2.01
HER1YOR227W SPT7P35177 1332 aa2.48□□□□□ -2.01
HER1YOR227W POM152P39685 1337 aa2.48□□□□□ -2.01
HER1YOR227W RRP14P36080 434 aaKnown RBP2.48□□□□□ -2.01
HER1YOR227W ALD6P54115 500 aaKnown RBP2.48□□□□□ -2.01
HER1YOR227W NSE3Q05541 303 aa2.48□□□□□ -2.01
HER1YOR227W JIP5Q06214 492 aaPredicted RBP2.48□□□□□ -2.01
HER1YOR227W TOS4Q06266 489 aa2.48□□□□□ -2.01
HER1YOR227W ENV9Q08651 330 aa2.48□□□□□ -2.01
HER1YOR227W SSB1P11484 613 aaKnown RBP2.47□□□□□ -2.01
HER1YOR227W SIS2P36024 562 aa2.47□□□□□ -2.01
HER1YOR227W BOI1P38041 980 aaKnown RBP2.47□□□□□ -2.01
HER1YOR227W ILV3P39522 585 aaKnown RBP2.47□□□□□ -2.01
HER1YOR227W UBP12P39538 1254 aa2.47□□□□□ -2.01
HER1YOR227W SSB2P40150 613 aaKnown RBP2.47□□□□□ -2.01
HER1YOR227W YJR142WP47173 342 aa2.47□□□□□ -2.01
HER1YOR227W SPR28Q04921 423 aa2.47□□□□□ -2.01
HER1YOR227W PIN2Q12057 282 aa2.47□□□□□ -2.01
HER1YOR227W PBP2P38151 413 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
HER1YOR227W FKH1P40466 484 aa2.47□□□□□ -2.01
HER1YOR227W PKH3Q03306 898 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms