RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C RRG1Q12167 365 aaPredicted RBP3.19□□□□□ -1.9
SGS1YMR190C YLR225CQ05948 407 aaKnown RBP3.19□□□□□ -1.9
SGS1YMR190C FKH1P40466 484 aa3.19□□□□□ -1.9
SGS1YMR190C LYS14P40971 790 aa3.19□□□□□ -1.9
SGS1YMR190C SGD1Q06132 899 aa3.19□□□□□ -1.9
SGS1YMR190C HVG1P0CE11 249 aa3.18□□□□□ -1.9
SGS1YMR190C IDI1P15496 288 aa3.18□□□□□ -1.9
SGS1YMR190C PRS1P32895 427 aaKnown RBP3.18□□□□□ -1.9
SGS1YMR190C OYE3P41816 400 aaPredicted RBP3.18□□□□□ -1.9
SGS1YMR190C EAF6P47128 113 aa3.18□□□□□ -1.9
SGS1YMR190C NSE3Q05541 303 aa3.18□□□□□ -1.9
SGS1YMR190C ACK1Q07622 623 aaPredicted RBP3.18□□□□□ -1.9
SGS1YMR190C YKR075CP36155 307 aa3.18□□□□□ -1.9
SGS1YMR190C PSF2P40359 213 aa3.18□□□□□ -1.9
SGS1YMR190C MET7Q08645 548 aa3.18□□□□□ -1.9
SGS1YMR190C PHM7Q12252 991 aa3.18□□□□□ -1.9
SGS1YMR190C YRF1-3P0CX14 1859 aa3.18□□□□□ -1.9
SGS1YMR190C YRF1-7P0CX15 1859 aa3.18□□□□□ -1.9
SGS1YMR190C YRF1-6P53819 1859 aa3.18□□□□□ -1.9
SGS1YMR190C MSB3P48566 633 aaPredicted RBP3.18□□□□□ -1.9
SGS1YMR190C KIP3P53086 805 aaKnown RBP3.18□□□□□ -1.9
SGS1YMR190C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SGS1YMR190C VPS53P47061 822 aa3.17□□□□□ -1.9
SGS1YMR190C GPT2P36148 743 aa3.17□□□□□ -1.9
SGS1YMR190C TPS3P38426 1054 aaKnown RBP3.17□□□□□ -1.9
SGS1YMR190C IOC3P43596 787 aa3.17□□□□□ -1.9
SGS1YMR190C BRE1Q07457 700 aaKnown RBP3.17□□□□□ -1.9
SGS1YMR190C SPT2P06843 333 aaPredicted RBP3.17□□□□□ -1.9
SGS1YMR190C SPE2P21182 396 aa3.17□□□□□ -1.9
SGS1YMR190C MAL31P38156 614 aa3.17□□□□□ -1.9
SGS1YMR190C SKY1Q03656 742 aa3.17□□□□□ -1.9
SGS1YMR190C CSR2Q12734 1121 aa3.17□□□□□ -1.9
SGS1YMR190C AUS1Q08409 1394 aa3.17□□□□□ -1.9
SGS1YMR190C YNL035CP53962 389 aaKnown RBP3.16□□□□□ -1.9
SGS1YMR190C AOS1Q06624 347 aa3.16□□□□□ -1.9
SGS1YMR190C UGA3P26370 528 aa3.16□□□□□ -1.9
SGS1YMR190C PCS60P38137 543 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9 RIP-Chip
SGS1YMR190C MXR1P40029 184 aa3.16□□□□□ -1.9
SGS1YMR190C MMF1P40185 145 aaKnown RBP3.16□□□□□ -1.9
SGS1YMR190C RCM1P53972 490 aa3.16□□□□□ -1.9
SGS1YMR190C PDS5Q04264 1277 aa3.16□□□□□ -1.9
SGS1YMR190C LYS2P07702 1392 aa3.16□□□□□ -1.9
SGS1YMR190C CLB5P30283 435 aa3.16□□□□□ -1.9
SGS1YMR190C SYN8P31377 255 aa3.16□□□□□ -1.9
SGS1YMR190C MCD4P36051 919 aa3.16□□□□□ -1.9
SGS1YMR190C FIR1P40020 876 aa3.16□□□□□ -1.9
SGS1YMR190C SNU71P53207 620 aaKnown RBP3.16□□□□□ -1.9
SGS1YMR190C NET1P47035 1189 aa3.15□□□□□ -1.9
SGS1YMR190C SYF1Q04048 859 aaPredicted RBP3.15□□□□□ -1.9
SGS1YMR190C HAT1Q12341 374 aa3.15□□□□□ -1.9
SGS1YMR190C POL3P15436 1097 aa3.15□□□□□ -1.91
SGS1YMR190C PER1P25625 357 aa3.15□□□□□ -1.91
SGS1YMR190C SMY2P32909 740 aaKnown RBP3.15□□□□□ -1.91
SGS1YMR190C NUG1P40010 520 aaKnown RBP3.15□□□□□ -1.91
SGS1YMR190C ART5P53244 586 aaKnown RBP3.15□□□□□ -1.91
SGS1YMR190C NOP53Q12080 455 aaKnown RBP3.15□□□□□ -1.91
SGS1YMR190C BFA1P47113 574 aa3.15□□□□□ -1.91
SGS1YMR190C GIN4Q12263 1142 aa3.15□□□□□ -1.91
SGS1YMR190C YLR278CQ05854 1341 aa3.14□□□□□ -1.91
SGS1YMR190C IRE1P32361 1115 aa3.14□□□□□ -1.91
SGS1YMR190C GUA1P38625 525 aaKnown RBP3.14□□□□□ -1.91
SGS1YMR190C ENP2P48234 707 aaKnown RBP3.14□□□□□ -1.91
SGS1YMR190C MAM3Q12296 706 aa3.14□□□□□ -1.91
SGS1YMR190C PPH3P32345 308 aa3.14□□□□□ -1.91
SGS1YMR190C TAP42Q04372 366 aa3.14□□□□□ -1.91
SGS1YMR190C ECM30Q06673 1274 aa3.14□□□□□ -1.91
SGS1YMR190C SDH5Q08230 162 aa3.14□□□□□ -1.91
SGS1YMR190C DPS1P04802 557 aaKnown RBP3.14□□□□□ -1.91
SGS1YMR190C APL2P36000 726 aaPredicted RBP3.14□□□□□ -1.91
SGS1YMR190C RTG3P38165 486 aa3.14□□□□□ -1.91
SGS1YMR190C RPN1P38764 993 aaKnown RBP3.14□□□□□ -1.91
SGS1YMR190C CIT3P43635 486 aa3.14□□□□□ -1.91
SGS1YMR190C RIM15P43565 1770 aa3.14□□□□□ -1.91
SGS1YMR190C RPP0P05317 312 aaKnown RBP3.13□□□□□ -1.91
SGS1YMR190C HXT5P38695 592 aa3.13□□□□□ -1.91
SGS1YMR190C FAA4P47912 694 aaKnown RBP3.13□□□□□ -1.91
SGS1YMR190C YVH1Q02256 364 aaKnown RBP3.13□□□□□ -1.91
SGS1YMR190C RPP2BP02400 110 aaKnown RBP3.13□□□□□ -1.91
SGS1YMR190C AFT1P22149 690 aa3.13□□□□□ -1.91
SGS1YMR190C KCC4P25389 1037 aa3.13□□□□□ -1.91
SGS1YMR190C YMR084WA2P2R3 262 aa3.13□□□□□ -1.91
SGS1YMR190C FET4P40988 552 aa3.13□□□□□ -1.91
SGS1YMR190C RSC8P43609 557 aaKnown RBP3.13□□□□□ -1.91
SGS1YMR190C VPS62P53285 467 aa3.13□□□□□ -1.91
SGS1YMR190C SNA3P14359 133 aa3.12□□□□□ -1.91
SGS1YMR190C ERG7P38604 731 aa3.12□□□□□ -1.91
SGS1YMR190C ZDS1P50111 915 aaKnown RBP3.12□□□□□ -1.91
SGS1YMR190C OCT1P35999 772 aa3.12□□□□□ -1.91
SGS1YMR190C SUB2Q07478 446 aaKnown RBP3.12□□□□□ -1.91
SGS1YMR190C UTP10P42945 1769 aaKnown RBP3.12□□□□□ -1.91
SGS1YMR190C TRK1P12685 1235 aa3.12□□□□□ -1.91
SGS1YMR190C DIT2P21595 489 aa3.12□□□□□ -1.91
SGS1YMR190C AIM21P40563 679 aa3.12□□□□□ -1.91
SGS1YMR190C TEA1P47988 759 aa3.12□□□□□ -1.91
SGS1YMR190C RRP46P53256 223 aaPredicted RBP3.12□□□□□ -1.91
SGS1YMR190C VPS29P38759 282 aa3.12□□□□□ -1.91
SGS1YMR190C FMO1P38866 432 aa3.12□□□□□ -1.91
SGS1YMR190C YJR107WP47145 328 aa3.12□□□□□ -1.91
SGS1YMR190C HUL5P53119 910 aa3.12□□□□□ -1.91
SGS1YMR190C LIF1P53150 421 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms