RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W THI12P42883 340 aa2.89□□□□□ -1.95
RTT107YHR154W THI5P43534 340 aa2.89□□□□□ -1.95
RTT107YHR154W THI11P47183 340 aa2.89□□□□□ -1.95
RTT107YHR154W LCB5Q06147 687 aaKnown RBP2.89□□□□□ -1.95
RTT107YHR154W THI13Q07748 340 aa2.89□□□□□ -1.95
RTT107YHR154W NUP188P52593 1655 aaKnown RBP2.89□□□□□ -1.95
RTT107YHR154W COX6P00427 148 aa2.88□□□□□ -1.95
RTT107YHR154W PAT1P25644 796 aaKnown RBP2.88□□□□□ -1.95
RTT107YHR154W TTI1P36097 1038 aa2.88□□□□□ -1.95
RTT107YHR154W SSF1P38789 453 aaPredicted RBP2.88□□□□□ -1.95
RTT107YHR154W YML083CQ04526 418 aa2.88□□□□□ -1.95
RTT107YHR154W RRN7P40992 514 aa2.87□□□□□ -1.95
RTT107YHR154W HED1Q03937 162 aa2.87□□□□□ -1.95
RTT107YHR154W YDL176WQ12027 708 aa2.87□□□□□ -1.95
RTT107YHR154W YSP2Q06681 1438 aa2.87□□□□□ -1.95
RTT107YHR154W KTR7P40504 517 aa2.87□□□□□ -1.95
RTT107YHR154W RTS3P53289 263 aa2.87□□□□□ -1.95
RTT107YHR154W HST3P53687 447 aa2.87□□□□□ -1.95
RTT107YHR154W ASH1P34233 588 aa2.87□□□□□ -1.95
RTT107YHR154W PAM1P37304 830 aaKnown RBP2.87□□□□□ -1.95
RTT107YHR154W VMR1P38735 1592 aa2.86□□□□□ -1.95
RTT107YHR154W YMR074CQ04773 145 aa2.86□□□□□ -1.95
RTT107YHR154W JIP5Q06214 492 aaPredicted RBP2.86□□□□□ -1.95
RTT107YHR154W YJR008WP47085 338 aa2.86□□□□□ -1.95
RTT107YHR154W NOB1Q08444 459 aaKnown RBP2.86□□□□□ -1.95
RTT107YHR154W IML1P47170 1584 aa2.85□□□□□ -1.95
RTT107YHR154W TOP1P04786 769 aa2.85□□□□□ -1.95
RTT107YHR154W TFB4Q12004 338 aa2.85□□□□□ -1.95
RTT107YHR154W PPG1P32838 368 aa2.85□□□□□ -1.95
RTT107YHR154W ALD4P46367 519 aaKnown RBP2.85□□□□□ -1.95
RTT107YHR154W PKH3Q03306 898 aaPredicted RBP2.85□□□□□ -1.95
RTT107YHR154W BIO2P32451 375 aa2.85□□□□□ -1.95
RTT107YHR154W IPL1P38991 367 aa2.85□□□□□ -1.95
RTT107YHR154W TEA1P47988 759 aa2.85□□□□□ -1.95
RTT107YHR154W CSC1Q06538 782 aa2.85□□□□□ -1.95
RTT107YHR154W CAT8P39113 1433 aa2.84□□□□□ -1.95
RTT107YHR154W TY1A-DR4O74302 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-HP0C2I4 478 aaKnown RBP2.84□□□□□ -1.96
RTT107YHR154W TY1A-AP0CX57 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-PR1P0CX58 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-ORP0CX59 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-PR2P0CX60 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-DR5P0CX65 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-ER2P0CX66 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-GR3P0CX67 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-LR1P0CX68 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-MR2P0CX69 440 aa2.84□□□□□ -1.96
RTT107YHR154W ASF1P32447 279 aa2.84□□□□□ -1.96
RTT107YHR154W STM1P39015 273 aaKnown RBP2.84□□□□□ -1.96
RTT107YHR154W TY1A-JR2P47099 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-DR1Q03856 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-ML1Q04706 440 aaKnown RBP2.84□□□□□ -1.96
RTT107YHR154W TY1A-BRQ12217 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-NL2Q12470 440 aa2.84□□□□□ -1.96
RTT107YHR154W TY1A-GR2Q12485 440 aa2.84□□□□□ -1.96
RTT107YHR154W YBL113CQ7M4S9 792 aa2.83□□□□□ -1.96
RTT107YHR154W BCK1Q01389 1478 aa2.83□□□□□ -1.96
RTT107YHR154W SEC2P17065 759 aa2.83□□□□□ -1.96
RTT107YHR154W ARG8P18544 423 aa2.83□□□□□ -1.96
RTT107YHR154W SPC42P36094 363 aa2.83□□□□□ -1.96
RTT107YHR154W CAF120P53836 1060 aa2.83□□□□□ -1.96
RTT107YHR154W RRD1P40454 393 aaKnown RBP2.83□□□□□ -1.96
RTT107YHR154W NUG1P40010 520 aaKnown RBP2.82□□□□□ -1.96
RTT107YHR154W POL32P47110 350 aa2.82□□□□□ -1.96
RTT107YHR154W NNF1P47149 201 aa2.82□□□□□ -1.96
RTT107YHR154W SVF1Q05515 481 aa2.82□□□□□ -1.96
RTT107YHR154W AFT1P22149 690 aa2.82□□□□□ -1.96
RTT107YHR154W ESS1P22696 170 aa2.82□□□□□ -1.96
RTT107YHR154W PUP1P25043 261 aa2.82□□□□□ -1.96
RTT107YHR154W KTR1P27810 393 aaKnown RBP2.82□□□□□ -1.96
RTT107YHR154W SEC20P28791 383 aa2.82□□□□□ -1.96
RTT107YHR154W GRS1P38088 690 aaKnown RBP2.82□□□□□ -1.96
RTT107YHR154W SUB1P54000 292 aaKnown RBP2.82□□□□□ -1.96
RTT107YHR154W SEN54Q02825 467 aaPredicted RBP2.82□□□□□ -1.96
RTT107YHR154W MET32Q12041 191 aa2.82□□□□□ -1.96
RTT107YHR154W ENO1P00924 437 aaKnown RBP2.81□□□□□ -1.96
RTT107YHR154W ECM23Q02710 187 aa2.81□□□□□ -1.96
RTT107YHR154W OYE2Q03558 400 aaKnown RBP2.81□□□□□ -1.96
RTT107YHR154W RAD59Q12223 238 aa2.81□□□□□ -1.96
RTT107YHR154W ALD2P47771 506 aa2.81□□□□□ -1.96
RTT107YHR154W YRB30P53107 440 aaPredicted RBP2.81□□□□□ -1.96
RTT107YHR154W KAR5Q04746 504 aa2.81□□□□□ -1.96
RTT107YHR154W SCJ1P25303 377 aa2.8□□□□□ -1.96
RTT107YHR154W UBX7P38349 436 aa2.8□□□□□ -1.96
RTT107YHR154W YJR115WP47152 169 aa2.8□□□□□ -1.96
RTT107YHR154W RNH70P53331 553 aa2.8□□□□□ -1.96
RTT107YHR154W FPR4Q06205 392 aaPredicted RBP2.8□□□□□ -1.96
RTT107YHR154W MMP1Q12372 583 aa2.8□□□□□ -1.96
RTT107YHR154W PSE1P32337 1089 aaKnown RBP2.8□□□□□ -1.96
RTT107YHR154W SRP40P32583 406 aaPredicted RBP2.8□□□□□ -1.96
RTT107YHR154W TGL4P36165 910 aa2.8□□□□□ -1.96
RTT107YHR154W YRF1-2P40105 1681 aa2.8□□□□□ -1.96
RTT107YHR154W TSR4P25040 408 aa2.8□□□□□ -1.96
RTT107YHR154W YDJ1P25491 409 aaKnown RBP2.8□□□□□ -1.96
RTT107YHR154W RRP14P36080 434 aaKnown RBP2.8□□□□□ -1.96
RTT107YHR154W YGR035CP53222 116 aa2.8□□□□□ -1.96
RTT107YHR154W ERP5P38819 212 aa2.79□□□□□ -1.96
RTT107YHR154W YAF9P53930 226 aa2.79□□□□□ -1.96
RTT107YHR154W VPS72Q03388 795 aa2.79□□□□□ -1.96
RTT107YHR154W PDR11P40550 1411 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms