RNA–Protein interactions for RNA: YGR101W

PCP1, Transcript of Mitochondrial serine protease, yeast

Gene PCP1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCP1	YGR101W	ZDS2	P54786	942 aa		10.54	□□□□□ -0.72
PCP1	YGR101W	FPR3	P38911	411 aa	Known RBP	10.53	□□□□□ -0.72
PCP1	YGR101W	SSP2	Q08646	371 aa		10.53	□□□□□ -0.72
PCP1	YGR101W	OPY1	P38271	328 aa		10.52	□□□□□ -0.73
PCP1	YGR101W	YPP1	P46951	817 aa		10.52	□□□□□ -0.73
PCP1	YGR101W	TEA1	P47988	759 aa		10.52	□□□□□ -0.73
PCP1	YGR101W	SQS1	P53866	767 aa	Known RBP	10.52	□□□□□ -0.73
PCP1	YGR101W	MDG1	P53885	366 aa		10.52	□□□□□ -0.73
PCP1	YGR101W	MRP7	P12687	371 aa		10.51	□□□□□ -0.73
PCP1	YGR101W	PFF1	P38244	976 aa		10.51	□□□□□ -0.73
PCP1	YGR101W	NOP8	Q08287	484 aa	Predicted RBP	10.51	□□□□□ -0.73
PCP1	YGR101W	TOM1	Q03280	3268 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	RPL17A	P05740	184 aa	Known RBP	10.5	□□□□□ -0.73
PCP1	YGR101W	SNF7	P39929	240 aa	Known RBP	10.5	□□□□□ -0.73
PCP1	YGR101W	RPL17B	P46990	184 aa	Known RBP	10.5	□□□□□ -0.73
PCP1	YGR101W	DNM1	P54861	757 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	VPS64	Q03944	604 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	CSI1	Q04368	295 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	YDR306C	Q06640	478 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	CTI6	Q08923	506 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	PHM7	Q12252	991 aa		10.5	□□□□□ -0.73
PCP1	YGR101W	TRP5	P00931	707 aa	Known RBP	10.49	□□□□□ -0.73
PCP1	YGR101W	SSA4	P22202	642 aa	Known RBP	10.49	□□□□□ -0.73
PCP1	YGR101W	RAD24	P32641	659 aa		10.48	□□□□□ -0.73
PCP1	YGR101W	CST6	P40535	587 aa		10.48	□□□□□ -0.73
PCP1	YGR101W	POL32	P47110	350 aa		10.48	□□□□□ -0.73
PCP1	YGR101W	FPK1	P53739	893 aa		10.48	□□□□□ -0.73
PCP1	YGR101W	LPD1	P09624	499 aa	Known RBP	10.47	□□□□□ -0.73
PCP1	YGR101W	SMY1	P32364	656 aa	Known RBP	10.47	□□□□□ -0.73
PCP1	YGR101W	APL2	P36000	726 aa	Predicted RBP	10.47	□□□□□ -0.73
PCP1	YGR101W	NUP133	P36161	1157 aa		10.47	□□□□□ -0.73
PCP1	YGR101W	PEX21	P50091	288 aa		10.47	□□□□□ -0.73
PCP1	YGR101W	YGR122W	P53272	402 aa		10.47	□□□□□ -0.73
PCP1	YGR101W	PUF6	Q04373	656 aa	Known RBP	10.47	□□□□□ -0.73
PCP1	YGR101W	SWI1	P09547	1314 aa		10.47	□□□□□ -0.73
PCP1	YGR101W	RPS19A	P07280	144 aa	Known RBP	10.46	□□□□□ -0.73
PCP1	YGR101W	RPS19B	P07281	144 aa	Predicted RBP	10.46	□□□□□ -0.73
PCP1	YGR101W	SER1	P33330	395 aa	Known RBP	10.46	□□□□□ -0.73
PCP1	YGR101W	RAT1	Q02792	1006 aa	Known RBP	10.46	□□□□□ -0.73
PCP1	YGR101W	PUS5	Q06244	254 aa		10.46	□□□□□ -0.73
PCP1	YGR101W	YGL082W	P53155	381 aa		10.45	□□□□□ -0.74
PCP1	YGR101W	YPR204W	Q08995	1032 aa		10.45	□□□□□ -0.74
PCP1	YGR101W	RPS9B	P05755	195 aa	Known RBP	10.44	□□□□□ -0.74
PCP1	YGR101W	ARG8	P18544	423 aa		10.44	□□□□□ -0.74
PCP1	YGR101W	YNG2	P38806	282 aa	Known RBP	10.44	□□□□□ -0.74
PCP1	YGR101W	ERO1	Q03103	563 aa		10.44	□□□□□ -0.74
PCP1	YGR101W	SWC3	P31376	625 aa		10.43	□□□□□ -0.74
PCP1	YGR101W	PKH1	Q03407	766 aa		10.43	□□□□□ -0.74
PCP1	YGR101W	YLR271W	Q06152	274 aa		10.43	□□□□□ -0.74
PCP1	YGR101W	MRPL32	P25348	183 aa		10.42	□□□□□ -0.74
PCP1	YGR101W	BOI2	P39969	1040 aa		10.42	□□□□□ -0.74
PCP1	YGR101W	YJR008W	P47085	338 aa		10.42	□□□□□ -0.74
PCP1	YGR101W	SPO1	P53541	631 aa		10.42	□□□□□ -0.74
PCP1	YGR101W	DCD1	P06773	312 aa		10.41	□□□□□ -0.74
PCP1	YGR101W	DIB1	Q06819	143 aa	Predicted RBP	10.41	□□□□□ -0.74
PCP1	YGR101W	BDF2	Q07442	638 aa		10.41	□□□□□ -0.74
PCP1	YGR101W	ILV3	P39522	585 aa	Known RBP	10.4	□□□□□ -0.74
PCP1	YGR101W	SIT4	P20604	311 aa		10.38	□□□□□ -0.75
PCP1	YGR101W	SHC1	P39000	512 aa		10.38	□□□□□ -0.75
PCP1	YGR101W	IRC3	Q06683	689 aa		10.38	□□□□□ -0.75
PCP1	YGR101W	ATG20	Q07528	640 aa		10.38	□□□□□ -0.75
PCP1	YGR101W	PMD1	P32634	1753 aa		10.38	□□□□□ -0.75
PCP1	YGR101W	TOP1	P04786	769 aa		10.37	□□□□□ -0.75
PCP1	YGR101W	ROX1	P25042	368 aa		10.37	□□□□□ -0.75
PCP1	YGR101W	ICL1	P28240	557 aa	Predicted RBP	10.37	□□□□□ -0.75
PCP1	YGR101W	SLI15	P38283	698 aa		10.37	□□□□□ -0.75
PCP1	YGR101W	SET1	P38827	1080 aa	Known RBP	10.37	□□□□□ -0.75
PCP1	YGR101W	UBP12	P39538	1254 aa		10.36	□□□□□ -0.75
PCP1	YGR101W	YIR014W	P40570	242 aa		10.36	□□□□□ -0.75
PCP1	YGR101W	FCP1	Q03254	732 aa		10.36	□□□□□ -0.75
PCP1	YGR101W	RLF2	Q12495	606 aa		10.36	□□□□□ -0.75
PCP1	YGR101W	RET1	P22276	1149 aa	Known RBP	10.35	□□□□□ -0.75
PCP1	YGR101W	GCD7	P32502	381 aa	Predicted RBP	10.35	□□□□□ -0.75
PCP1	YGR101W	NMD2	P38798	1089 aa	Known RBP	10.35	□□□□□ -0.75
PCP1	YGR101W	HGH1	P48362	394 aa	Known RBP	10.35	□□□□□ -0.75
PCP1	YGR101W	ITC1	P53125	1264 aa		10.35	□□□□□ -0.75
PCP1	YGR101W	PSH1	Q12161	406 aa		10.35	□□□□□ -0.75
PCP1	YGR101W	YLR278C	Q05854	1341 aa		10.34	□□□□□ -0.75
PCP1	YGR101W	YKU70	P32807	602 aa		10.34	□□□□□ -0.75
PCP1	YGR101W	RPS0B	P46654	252 aa	Known RBP	10.34	□□□□□ -0.75
PCP1	YGR101W	GRX6	Q12438	231 aa		10.34	□□□□□ -0.75
PCP1	YGR101W	SSK22	P25390	1331 aa	Predicted RBP	10.33	□□□□□ -0.76
PCP1	YGR101W	UBP16	Q02863	499 aa		10.33	□□□□□ -0.76
PCP1	YGR101W	HAT1	Q12341	374 aa		10.33	□□□□□ -0.76
PCP1	YGR101W	THS1	P04801	734 aa	Known RBP	10.32	□□□□□ -0.76
PCP1	YGR101W	CAF20	P12962	161 aa	Known RBP	10.32	□□□□□ -0.76
PCP1	YGR101W	RTG2	P32608	588 aa	Known RBP	10.32	□□□□□ -0.76
PCP1	YGR101W	SUP35	P05453	685 aa	Known RBP	10.31	□□□□□ -0.76
PCP1	YGR101W	FIG2	P25653	1609 aa		10.31	□□□□□ -0.76
PCP1	YGR101W	SSF1	P38789	453 aa	Predicted RBP	10.3	□□□□□ -0.76
PCP1	YGR101W	YGR130C	P53278	816 aa		10.3	□□□□□ -0.76
PCP1	YGR101W	MTC5	Q03897	1148 aa		10.3	□□□□□ -0.76
PCP1	YGR101W	SYF1	Q04048	859 aa	Predicted RBP	10.3	□□□□□ -0.76
PCP1	YGR101W	NOP58	Q12499	511 aa	Known RBP	10.3	□□□□□ -0.76
PCP1	YGR101W	RIX1	P38883	763 aa	Predicted RBP	10.29	□□□□□ -0.76
PCP1	YGR101W	HXT10	P43581	546 aa		10.29	□□□□□ -0.76
PCP1	YGR101W	ECM16	Q04217	1267 aa	Known RBP	10.29	□□□□□ -0.76
PCP1	YGR101W	NCB2	Q92317	146 aa		10.29	□□□□□ -0.76
PCP1	YGR101W	BDP1	P46678	594 aa		10.28	□□□□□ -0.76
PCP1	YGR101W	SAC3	P46674	1301 aa		10.28	□□□□□ -0.76

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms