RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W CLC1P17891 233 aa6.61□□□□□ -1.35
CDC43YGL155W MAK10Q02197 733 aa6.61□□□□□ -1.35
CDC43YGL155W YPL062WQ02781 134 aa6.61□□□□□ -1.35
CDC43YGL155W RPO41P13433 1351 aaKnown RBP6.6□□□□□ -1.35
CDC43YGL155W GAP1P19145 602 aaPredicted RBP6.6□□□□□ -1.35
CDC43YGL155W YNR029CP53729 429 aaKnown RBP6.6□□□□□ -1.35
CDC43YGL155W CSE4P36012 229 aa6.59□□□□□ -1.35
CDC43YGL155W POL32P47110 350 aa6.59□□□□□ -1.35
CDC43YGL155W BNI4P53858 892 aa6.59□□□□□ -1.35
CDC43YGL155W HEF3P53978 1044 aaKnown RBP6.59□□□□□ -1.35
CDC43YGL155W ECM16Q04217 1267 aaKnown RBP6.59□□□□□ -1.35
CDC43YGL155W TY1B-NL2Q99337 1749 aaKnown RBP6.59□□□□□ -1.36
CDC43YGL155W AUS1Q08409 1394 aa6.58□□□□□ -1.36
CDC43YGL155W PRP43P53131 767 aaKnown RBP6.58□□□□□ -1.36
CDC43YGL155W APC1P53886 1748 aa6.57□□□□□ -1.36
CDC43YGL155W SPB4P25808 606 aaPredicted RBP6.57□□□□□ -1.36
CDC43YGL155W RTT109Q07794 436 aa6.57□□□□□ -1.36
CDC43YGL155W GAS4Q08271 471 aa6.57□□□□□ -1.36
CDC43YGL155W ISU2Q12056 156 aa6.57□□□□□ -1.36
CDC43YGL155W MAM3Q12296 706 aa6.57□□□□□ -1.36
CDC43YGL155W RPS24AP0CX31 135 aaKnown RBP6.56□□□□□ -1.36
CDC43YGL155W RPS24BP0CX32 135 aaKnown RBP6.56□□□□□ -1.36
CDC43YGL155W IES2P40154 320 aa6.56□□□□□ -1.36
CDC43YGL155W PUF6Q04373 656 aaKnown RBP6.56□□□□□ -1.36
CDC43YGL155W AKL1P38080 1108 aaKnown RBP6.55□□□□□ -1.36
CDC43YGL155W PTC2P39966 464 aaKnown RBP6.55□□□□□ -1.36
CDC43YGL155W MAM1P40065 302 aa6.55□□□□□ -1.36
CDC43YGL155W GYP7P48365 746 aa6.55□□□□□ -1.36
CDC43YGL155W YNL050CP53952 270 aa6.55□□□□□ -1.36
CDC43YGL155W PDR1P12383 1068 aa6.54□□□□□ -1.36
CDC43YGL155W RAM1P22007 431 aa6.54□□□□□ -1.36
CDC43YGL155W SNF7P39929 240 aaKnown RBP6.54□□□□□ -1.36
CDC43YGL155W NUP42P49686 430 aaKnown RBP6.54□□□□□ -1.36
CDC43YGL155W ZDS1P50111 915 aaKnown RBP6.54□□□□□ -1.36
CDC43YGL155W YPR015CQ12531 247 aa6.54□□□□□ -1.36
CDC43YGL155W ADE6P38972 1358 aaKnown RBP6.54□□□□□ -1.36
CDC43YGL155W VPS24P36095 224 aaKnown RBP6.52□□□□□ -1.37
CDC43YGL155W MVP1P40959 511 aaKnown RBP6.52□□□□□ -1.37
CDC43YGL155W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
CDC43YGL155W CSC1Q06538 782 aa6.52□□□□□ -1.37
CDC43YGL155W RPP1BP10622 106 aaKnown RBP6.51□□□□□ -1.37
CDC43YGL155W PCT1P13259 424 aa6.51□□□□□ -1.37
CDC43YGL155W RGR1P19263 1082 aa6.51□□□□□ -1.37
CDC43YGL155W DIT2P21595 489 aa6.51□□□□□ -1.37
CDC43YGL155W YMR196WQ04336 1088 aa6.51□□□□□ -1.37
CDC43YGL155W EDE1P34216 1381 aa6.51□□□□□ -1.37
CDC43YGL155W RRT14P40470 206 aa6.5□□□□□ -1.37
CDC43YGL155W DSD1P53095 428 aa6.5□□□□□ -1.37
CDC43YGL155W CTF4Q01454 927 aa6.5□□□□□ -1.37
CDC43YGL155W TFB4Q12004 338 aa6.5□□□□□ -1.37
CDC43YGL155W YRR1Q12172 810 aa6.5□□□□□ -1.37
CDC43YGL155W ROX1P25042 368 aa6.49□□□□□ -1.37
CDC43YGL155W NTH2P35172 780 aa6.49□□□□□ -1.37
CDC43YGL155W YPP1P46951 817 aa6.49□□□□□ -1.37
CDC43YGL155W TUM1Q08686 304 aaKnown RBP6.49□□□□□ -1.37
CDC43YGL155W LSP1Q12230 341 aaKnown RBP6.49□□□□□ -1.37
CDC43YGL155W CAB3P36076 571 aa6.48□□□□□ -1.37
CDC43YGL155W YNG2P38806 282 aaKnown RBP6.48□□□□□ -1.37
CDC43YGL155W SRT1Q03175 343 aa6.48□□□□□ -1.37
CDC43YGL155W AOS1Q06624 347 aa6.48□□□□□ -1.37
CDC43YGL155W YRF1-2P40105 1681 aa6.48□□□□□ -1.37
CDC43YGL155W TY4B-HP0C2J7 1802 aa6.48□□□□□ -1.37
CDC43YGL155W TY4B-JP47024 1803 aa6.48□□□□□ -1.37
CDC43YGL155W HSP104P31539 908 aaKnown RBP6.47□□□□□ -1.37
CDC43YGL155W PSE1P32337 1089 aaKnown RBP6.47□□□□□ -1.37
CDC43YGL155W PEX21P50091 288 aa6.47□□□□□ -1.37
CDC43YGL155W NSE3Q05541 303 aa6.47□□□□□ -1.37
CDC43YGL155W NOP8Q08287 484 aaPredicted RBP6.47□□□□□ -1.37
CDC43YGL155W YPR109WQ06104 294 aa6.46□□□□□ -1.38
CDC43YGL155W BMS1Q08965 1183 aaKnown RBP6.46□□□□□ -1.38
CDC43YGL155W RAD50P12753 1312 aa6.46□□□□□ -1.38
CDC43YGL155W RRP5Q05022 1729 aaKnown RBP6.45□□□□□ -1.38
CDC43YGL155W RPS19AP07280 144 aaKnown RBP6.45□□□□□ -1.38
CDC43YGL155W RPS19BP07281 144 aaPredicted RBP6.45□□□□□ -1.38
CDC43YGL155W UGA3P26370 528 aa6.45□□□□□ -1.38
CDC43YGL155W RFC1P38630 861 aaKnown RBP6.45□□□□□ -1.38
CDC43YGL155W ITC1P53125 1264 aa6.45□□□□□ -1.38
CDC43YGL155W CSI1Q04368 295 aa6.45□□□□□ -1.38
CDC43YGL155W RLF2Q12495 606 aa6.45□□□□□ -1.38
CDC43YGL155W FKS3Q04952 1785 aa6.44□□□□□ -1.38
CDC43YGL155W AMS1P22855 1083 aa6.44□□□□□ -1.38
CDC43YGL155W MNN4P36044 1178 aa6.44□□□□□ -1.38
CDC43YGL155W YBR287WP38355 427 aa6.44□□□□□ -1.38
CDC43YGL155W NMD2P38798 1089 aaKnown RBP6.44□□□□□ -1.38
CDC43YGL155W STR2P47164 639 aa6.44□□□□□ -1.38
CDC43YGL155W COG8Q04632 607 aa6.44□□□□□ -1.38
CDC43YGL155W MSP1P28737 362 aa6.43□□□□□ -1.38
CDC43YGL155W DJP1P40564 432 aa6.43□□□□□ -1.38
CDC43YGL155W HGH1P48362 394 aaKnown RBP6.43□□□□□ -1.38
CDC43YGL155W SPO1P53541 631 aa6.43□□□□□ -1.38
CDC43YGL155W NKP2Q06162 153 aa6.43□□□□□ -1.38
CDC43YGL155W LYS2P07702 1392 aa6.43□□□□□ -1.38
CDC43YGL155W COQ4O13525 335 aa6.42□□□□□ -1.38
CDC43YGL155W SRS2P12954 1174 aa6.42□□□□□ -1.38
CDC43YGL155W KCC4P25389 1037 aa6.42□□□□□ -1.38
CDC43YGL155W NUD1P32336 851 aa6.42□□□□□ -1.38
CDC43YGL155W ARL1P38116 183 aaKnown RBP6.42□□□□□ -1.38
CDC43YGL155W ISM1P48526 1002 aa6.42□□□□□ -1.38
CDC43YGL155W URB1P34241 1764 aaKnown RBP6.41□□□□□ -1.38
CDC43YGL155W PRP5P21372 849 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms