RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C BOI2P39969 1040 aa5.41□□□□□ -1.54
PRP43YGL120C SUM1P46676 1062 aa5.41□□□□□ -1.54
PRP43YGL120C KEL2P50090 882 aa5.41□□□□□ -1.54
PRP43YGL120C UTP13Q05946 817 aaKnown RBP5.41□□□□□ -1.54
PRP43YGL120C CDC45Q08032 650 aa5.41□□□□□ -1.54
PRP43YGL120C YIR014WP40570 242 aa5.4□□□□□ -1.54
PRP43YGL120C IES1P43579 692 aa5.4□□□□□ -1.54
PRP43YGL120C TIM11P81449 96 aaPredicted RBP5.4□□□□□ -1.54
PRP43YGL120C HEH2Q03281 663 aa5.4□□□□□ -1.54
PRP43YGL120C ESC2Q06340 456 aa5.4□□□□□ -1.54
PRP43YGL120C UBX5Q06682 500 aa5.4□□□□□ -1.54
PRP43YGL120C SPP41P38904 1435 aa5.4□□□□□ -1.55
PRP43YGL120C MAK16P10962 306 aaPredicted RBP5.4□□□□□ -1.55
PRP43YGL120C VMA4P22203 233 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C DPH5P32469 300 aaPredicted RBP5.4□□□□□ -1.55
PRP43YGL120C YEL1P34225 687 aa5.4□□□□□ -1.55
PRP43YGL120C COY1P34237 679 aa5.4□□□□□ -1.55
PRP43YGL120C ARL1P38116 183 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C OLA1P38219 394 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C MPH1P40562 993 aa5.4□□□□□ -1.55
PRP43YGL120C ESF2P53743 316 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C IST1P53843 298 aaPredicted RBP5.4□□□□□ -1.55
PRP43YGL120C DNM1P54861 757 aa5.4□□□□□ -1.55
PRP43YGL120C REX2P54964 269 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C ADE12P80210 433 aaKnown RBP5.4□□□□□ -1.55
PRP43YGL120C HIR2P32480 875 aa5.39□□□□□ -1.55
PRP43YGL120C NFU1P32860 256 aa5.39□□□□□ -1.55
PRP43YGL120C YHR218WP38899 603 aa5.39□□□□□ -1.55
PRP43YGL120C ERP2P39704 215 aa5.39□□□□□ -1.55
PRP43YGL120C YTA6P40328 754 aa5.39□□□□□ -1.55
PRP43YGL120C YRB1P41920 201 aaKnown RBP5.39□□□□□ -1.55
PRP43YGL120C YLR271WQ06152 274 aa5.39□□□□□ -1.55
PRP43YGL120C YDL121CQ07541 149 aa5.39□□□□□ -1.55
PRP43YGL120C PCL8Q08966 492 aa5.39□□□□□ -1.55
PRP43YGL120C TFB4Q12004 338 aa5.39□□□□□ -1.55
PRP43YGL120C UBP13P38187 747 aa5.39□□□□□ -1.55
PRP43YGL120C ERC1P38767 581 aa5.39□□□□□ -1.55
PRP43YGL120C SHC1P39000 512 aa5.39□□□□□ -1.55
PRP43YGL120C PES4P39684 611 aa5.39□□□□□ -1.55
PRP43YGL120C RIO2P40160 425 aaKnown RBP5.39□□□□□ -1.55
PRP43YGL120C MSH6Q03834 1242 aa5.39□□□□□ -1.55
PRP43YGL120C VMS1Q04311 632 aaKnown RBP5.39□□□□□ -1.55
PRP43YGL120C TMA64Q04600 565 aaKnown RBP5.39□□□□□ -1.55
PRP43YGL120C YOL087CQ99247 1116 aa5.39□□□□□ -1.55
PRP43YGL120C TRS33Q99394 268 aa5.39□□□□□ -1.55
PRP43YGL120C MMS22Q06164 1454 aa5.38□□□□□ -1.55
PRP43YGL120C BUD14P27637 709 aa5.38□□□□□ -1.55
PRP43YGL120C RAD16P31244 790 aa5.38□□□□□ -1.55
PRP43YGL120C KNS1P32350 737 aaPredicted RBP5.38□□□□□ -1.55
PRP43YGL120C ATG14P38270 344 aa5.38□□□□□ -1.55
PRP43YGL120C SWD1P39706 426 aa5.38□□□□□ -1.55
PRP43YGL120C BUD27P43573 796 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
PRP43YGL120C YGL140CP53120 1219 aa5.38□□□□□ -1.55
PRP43YGL120C ERB1Q04660 807 aaKnown RBP5.38□□□□□ -1.55
PRP43YGL120C NOC3Q07896 663 aaPredicted RBP5.38□□□□□ -1.55
PRP43YGL120C MYO4P32492 1471 aa5.38□□□□□ -1.55
PRP43YGL120C UGA3P26370 528 aa5.37□□□□□ -1.55
PRP43YGL120C MSP1P28737 362 aa5.37□□□□□ -1.55
PRP43YGL120C ACP1P32463 125 aa5.37□□□□□ -1.55
PRP43YGL120C ELM1P32801 640 aa5.37□□□□□ -1.55
PRP43YGL120C PMC1P38929 1173 aaPredicted RBP5.37□□□□□ -1.55
PRP43YGL120C YMR102CQ03177 834 aa5.37□□□□□ -1.55
PRP43YGL120C YMR111CQ04461 462 aaPredicted RBP5.37□□□□□ -1.55
PRP43YGL120C YPR097WQ06839 1073 aa5.37□□□□□ -1.55
PRP43YGL120C YOR238WQ08634 303 aa5.37□□□□□ -1.55
PRP43YGL120C WHI5Q12416 295 aa5.37□□□□□ -1.55
PRP43YGL120C ERP4Q12450 207 aa5.37□□□□□ -1.55
PRP43YGL120C RKM4Q12504 494 aa5.37□□□□□ -1.55
PRP43YGL120C XRN1P22147 1528 aaKnown RBP5.37□□□□□ -1.55
PRP43YGL120C HMG1P12683 1054 aa5.37□□□□□ -1.55
PRP43YGL120C VPS24P36095 224 aaKnown RBP5.37□□□□□ -1.55
PRP43YGL120C SLX8P40072 274 aa5.37□□□□□ -1.55
PRP43YGL120C INP52P50942 1183 aa5.37□□□□□ -1.55
PRP43YGL120C HMI1Q12039 706 aa5.37□□□□□ -1.55
PRP43YGL120C MAK11P20484 414 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C SSZ1P38788 538 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C UBP12P39538 1254 aa5.36□□□□□ -1.55
PRP43YGL120C VHR2P40041 505 aa5.36□□□□□ -1.55
PRP43YGL120C SPR3P41901 512 aa5.36□□□□□ -1.55
PRP43YGL120C HOS3Q02959 697 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C ARO80Q04052 950 aa5.36□□□□□ -1.55
PRP43YGL120C MPC54Q08550 464 aa5.36□□□□□ -1.55
PRP43YGL120C SRB8P25648 1427 aa5.36□□□□□ -1.55
PRP43YGL120C RAD9P14737 1309 aa5.36□□□□□ -1.55
PRP43YGL120C PCT1P13259 424 aa5.36□□□□□ -1.55
PRP43YGL120C RRP1P35178 278 aaPredicted RBP5.36□□□□□ -1.55
PRP43YGL120C ETP1P38748 585 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C SDS3P40505 327 aa5.36□□□□□ -1.55
PRP43YGL120C YIR042CP40586 236 aa5.36□□□□□ -1.55
PRP43YGL120C SET2P46995 733 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C SMD2Q06217 110 aaKnown RBP5.36□□□□□ -1.55
PRP43YGL120C CLP1Q08685 445 aaPredicted RBP5.36□□□□□ -1.55
PRP43YGL120C SNU66Q12420 587 aaPredicted RBP5.36□□□□□ -1.55
PRP43YGL120C BUD4P47136 1447 aa5.35□□□□□ -1.55
PRP43YGL120C MON2P48563 1636 aaPredicted RBP5.35□□□□□ -1.55
PRP43YGL120C MST1P07236 462 aa5.35□□□□□ -1.55
PRP43YGL120C NIP100P33420 868 aa5.35□□□□□ -1.55
PRP43YGL120C TOM20P35180 183 aa5.35□□□□□ -1.55
PRP43YGL120C GGA2P38817 585 aaKnown RBP5.35□□□□□ -1.55
PRP43YGL120C RTT107P38850 1070 aa5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms