RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C PEX29Q03370 554 aa6.5□□□□□ -1.37
RPN6YDL097C RAV1P47104 1357 aa6.5□□□□□ -1.37
RPN6YDL097C RPS9BP05755 195 aaKnown RBP6.49□□□□□ -1.37
RPN6YDL097C MEC3Q02574 474 aa6.49□□□□□ -1.37
RPN6YDL097C GAP1P19145 602 aaPredicted RBP6.48□□□□□ -1.37
RPN6YDL097C GUT1P32190 709 aa6.48□□□□□ -1.37
RPN6YDL097C SPT23P35210 1082 aa6.48□□□□□ -1.37
RPN6YDL097C RGA2Q06407 1009 aa6.48□□□□□ -1.37
RPN6YDL097C TAO3P40468 2376 aa6.47□□□□□ -1.37
RPN6YDL097C YMR084WA2P2R3 262 aa6.47□□□□□ -1.37
RPN6YDL097C SRC1Q03707 834 aa6.47□□□□□ -1.37
RPN6YDL097C RIM15P43565 1770 aa6.46□□□□□ -1.37
RPN6YDL097C YLR419WQ06698 1435 aaKnown RBP6.46□□□□□ -1.38
RPN6YDL097C ICL1P28240 557 aaPredicted RBP6.46□□□□□ -1.38
RPN6YDL097C PTC3P34221 468 aaKnown RBP6.46□□□□□ -1.38
RPN6YDL097C SHC1P39000 512 aa6.46□□□□□ -1.38
RPN6YDL097C ADE16P54113 591 aaKnown RBP6.45□□□□□ -1.38
RPN6YDL097C TAF8Q03750 510 aa6.45□□□□□ -1.38
RPN6YDL097C ATG13Q06628 738 aa6.45□□□□□ -1.38
RPN6YDL097C FBP1P09201 348 aa6.44□□□□□ -1.38
RPN6YDL097C SMY1P32364 656 aaKnown RBP6.44□□□□□ -1.38
RPN6YDL097C CSE4P36012 229 aa6.44□□□□□ -1.38
RPN6YDL097C EDS1P38073 919 aa6.44□□□□□ -1.38
RPN6YDL097C PAF1P38351 445 aa6.44□□□□□ -1.38
RPN6YDL097C AIM7Q12156 149 aa6.43□□□□□ -1.38
RPN6YDL097C YLL066CQ99208 1374 aa6.42□□□□□ -1.38
RPN6YDL097C PFF1P38244 976 aa6.42□□□□□ -1.38
RPN6YDL097C BSD2P38356 321 aa6.42□□□□□ -1.38
RPN6YDL097C PEA2P40091 420 aa6.42□□□□□ -1.38
RPN6YDL097C NST1P53935 1240 aa6.42□□□□□ -1.38
RPN6YDL097C HAP5Q02516 242 aa6.42□□□□□ -1.38
RPN6YDL097C TYW1Q08960 810 aaKnown RBP6.42□□□□□ -1.38
RPN6YDL097C RPO41P13433 1351 aaKnown RBP6.42□□□□□ -1.38
RPN6YDL097C HVG1P0CE11 249 aa6.41□□□□□ -1.38
RPN6YDL097C MAK11P20484 414 aaKnown RBP6.41□□□□□ -1.38
RPN6YDL097C GRX1P25373 110 aaKnown RBP6.41□□□□□ -1.38
RPN6YDL097C DLD1P32891 587 aa6.41□□□□□ -1.38
RPN6YDL097C CTI6Q08923 506 aa6.41□□□□□ -1.38
RPN6YDL097C RTC1Q08281 1341 aa6.41□□□□□ -1.38
RPN6YDL097C RPS24AP0CX31 135 aaKnown RBP6.4□□□□□ -1.39
RPN6YDL097C RPS24BP0CX32 135 aaKnown RBP6.4□□□□□ -1.39
RPN6YDL097C FET4P40988 552 aa6.4□□□□□ -1.39
RPN6YDL097C YKU70P32807 602 aa6.39□□□□□ -1.39
RPN6YDL097C RGA1P39083 1007 aa6.39□□□□□ -1.39
RPN6YDL097C PTC2P39966 464 aaKnown RBP6.39□□□□□ -1.39
RPN6YDL097C CLA4P48562 842 aa6.39□□□□□ -1.39
RPN6YDL097C FAS2P19097 1887 aaKnown RBP6.39□□□□□ -1.39
RPN6YDL097C MPH3P0CE00 602 aa6.38□□□□□ -1.39
RPN6YDL097C SOL3P38858 249 aa6.38□□□□□ -1.39
RPN6YDL097C CWC15Q03772 175 aaKnown RBP6.38□□□□□ -1.39
RPN6YDL097C YLL067CQ07888 1374 aa6.38□□□□□ -1.39
RPN6YDL097C YIL177CP40434 1758 aa6.37□□□□□ -1.39
RPN6YDL097C YJL225CP40889 1758 aa6.37□□□□□ -1.39
RPN6YDL097C AI4P03878 556 aa6.37□□□□□ -1.39
RPN6YDL097C MSM1P22438 575 aa6.37□□□□□ -1.39
RPN6YDL097C PRP43P53131 767 aaKnown RBP6.37□□□□□ -1.39
RPN6YDL097C BNI4P53858 892 aa6.37□□□□□ -1.39
RPN6YDL097C RSC30P38781 883 aa6.36□□□□□ -1.39
RPN6YDL097C TIM50Q02776 476 aa6.36□□□□□ -1.39
RPN6YDL097C RAM2P29703 316 aa6.35□□□□□ -1.39
RPN6YDL097C GLC3P32775 704 aa6.35□□□□□ -1.39
RPN6YDL097C ILV3P39522 585 aaKnown RBP6.35□□□□□ -1.39
RPN6YDL097C EAR1Q03212 550 aa6.35□□□□□ -1.39
RPN6YDL097C CSR2Q12734 1121 aa6.35□□□□□ -1.39
RPN6YDL097C SIR4P11978 1358 aa6.34□□□□□ -1.39
RPN6YDL097C FIG2P25653 1609 aa6.34□□□□□ -1.39
RPN6YDL097C ERO1Q03103 563 aa6.34□□□□□ -1.39
RPN6YDL097C YML082WQ04533 649 aaKnown RBP6.34□□□□□ -1.39
RPN6YDL097C COQ8P27697 501 aa6.33□□□□□ -1.4
RPN6YDL097C MOT2P34909 587 aaKnown RBP6.33□□□□□ -1.4
RPN6YDL097C LEU2P04173 364 aaPredicted RBP6.32□□□□□ -1.4
RPN6YDL097C APE3P37302 537 aaKnown RBP6.32□□□□□ -1.4
RPN6YDL097C EMP47P43555 445 aa6.32□□□□□ -1.4
RPN6YDL097C MTR4P47047 1073 aaKnown RBP6.32□□□□□ -1.4
RPN6YDL097C MPC54Q08550 464 aa6.32□□□□□ -1.4
RPN6YDL097C TOR2P32600 2474 aaKnown RBP6.32□□□□□ -1.4
RPN6YDL097C RAS1P01119 309 aa6.31□□□□□ -1.4
RPN6YDL097C IRC3Q06683 689 aa6.31□□□□□ -1.4
RPN6YDL097C GRX6Q12438 231 aa6.3□□□□□ -1.4
RPN6YDL097C PAH1P32567 862 aa6.29□□□□□ -1.4
RPN6YDL097C PCS60P38137 543 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
RPN6YDL097C NMA111P53920 997 aa6.29□□□□□ -1.4
RPN6YDL097C TRM44Q02648 567 aaKnown RBP6.28□□□□□ -1.4
RPN6YDL097C OSM1P21375 501 aaKnown RBP6.27□□□□□ -1.41
RPN6YDL097C PNT1P38969 423 aa6.27□□□□□ -1.41
RPN6YDL097C LPD1P09624 499 aaKnown RBP6.26□□□□□ -1.41
RPN6YDL097C CAF20P12962 161 aaKnown RBP6.26□□□□□ -1.41
RPN6YDL097C RRT6P53117 311 aaPredicted RBP6.26□□□□□ -1.41
RPN6YDL097C SGD1Q06132 899 aa6.26□□□□□ -1.41
RPN6YDL097C ESL2P36168 1195 aa6.25□□□□□ -1.41
RPN6YDL097C YBP2P53169 641 aa6.25□□□□□ -1.41
RPN6YDL097C YGR117CP53270 476 aa6.25□□□□□ -1.41
RPN6YDL097C HPR1P17629 752 aaKnown RBP6.25□□□□□ -1.41
RPN6YDL097C YGR273CP53329 174 aa6.25□□□□□ -1.41
RPN6YDL097C BUD27P43573 796 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
RPN6YDL097C VPS4P52917 437 aa6.24□□□□□ -1.41
RPN6YDL097C RBA50Q04418 439 aa6.24□□□□□ -1.41
RPN6YDL097C DPL1Q05567 589 aa6.24□□□□□ -1.41
RPN6YDL097C BDF2Q07442 638 aa6.24□□□□□ -1.41
RPN6YDL097C SIT4P20604 311 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms