RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W RPO41P13433 1351 aaKnown RBP8.12□□□□□ -1.11
LDB16YCL005W PRP5P21372 849 aaPredicted RBP8.12□□□□□ -1.11
LDB16YCL005W CLB5P30283 435 aa8.12□□□□□ -1.11
LDB16YCL005W MPP10P47083 593 aaKnown RBP8.12□□□□□ -1.11
LDB16YCL005W RRP46P53256 223 aaPredicted RBP8.12□□□□□ -1.11
LDB16YCL005W RGR1P19263 1082 aa8.11□□□□□ -1.11
LDB16YCL005W PRP45P28004 379 aaPredicted RBP8.11□□□□□ -1.11
LDB16YCL005W SPT23P35210 1082 aa8.11□□□□□ -1.11
LDB16YCL005W TEA1P47988 759 aa8.11□□□□□ -1.11
LDB16YCL005W YIL177CP40434 1758 aa8.11□□□□□ -1.11
LDB16YCL005W YJL225CP40889 1758 aa8.11□□□□□ -1.11
LDB16YCL005W YRF1-2P40105 1681 aa8.11□□□□□ -1.11
LDB16YCL005W FKS3Q04952 1785 aa8.1□□□□□ -1.11
LDB16YCL005W GAP1P19145 602 aaPredicted RBP8.1□□□□□ -1.11
LDB16YCL005W MVP1P40959 511 aaKnown RBP8.1□□□□□ -1.11
LDB16YCL005W NOP2P40991 618 aaKnown RBP8.1□□□□□ -1.11
LDB16YCL005W APC1P53886 1748 aa8.09□□□□□ -1.11
LDB16YCL005W TFB4Q12004 338 aa8.09□□□□□ -1.11
LDB16YCL005W URB1P34241 1764 aaKnown RBP8.09□□□□□ -1.11
LDB16YCL005W PRD1P25375 712 aa8.08□□□□□ -1.12
LDB16YCL005W PEX21P50091 288 aa8.08□□□□□ -1.12
LDB16YCL005W YRB30P53107 440 aaPredicted RBP8.08□□□□□ -1.12
LDB16YCL005W HAP5Q02516 242 aa8.08□□□□□ -1.12
LDB16YCL005W DPL1Q05567 589 aa8.08□□□□□ -1.12
LDB16YCL005W SLM3Q12093 417 aa8.08□□□□□ -1.12
LDB16YCL005W RVB2Q12464 471 aaKnown RBP8.08□□□□□ -1.12
LDB16YCL005W SUI2P20459 304 aaKnown RBP8.07□□□□□ -1.12
LDB16YCL005W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
LDB16YCL005W CDC73Q06697 393 aa8.07□□□□□ -1.12
LDB16YCL005W AKL1P38080 1108 aaKnown RBP8.06□□□□□ -1.12
LDB16YCL005W GUA1P38625 525 aaKnown RBP8.06□□□□□ -1.12
LDB16YCL005W MSB3P48566 633 aaPredicted RBP8.06□□□□□ -1.12
LDB16YCL005W SSA2P10592 639 aaKnown RBP8.05□□□□□ -1.12
LDB16YCL005W SAP155P43612 1002 aa8.05□□□□□ -1.12
LDB16YCL005W HPC2Q01448 625 aa8.05□□□□□ -1.12
LDB16YCL005W THI22Q06490 572 aa8.05□□□□□ -1.12
LDB16YCL005W TCB1Q12466 1186 aa8.05□□□□□ -1.12
LDB16YCL005W TPD3P31383 635 aa8.04□□□□□ -1.12
LDB16YCL005W RGA1P39083 1007 aa8.04□□□□□ -1.12
LDB16YCL005W DSD1P53095 428 aa8.04□□□□□ -1.12
LDB16YCL005W BNI4P53858 892 aa8.03□□□□□ -1.12
LDB16YCL005W YPR109WQ06104 294 aa8.03□□□□□ -1.12
LDB16YCL005W MPC54Q08550 464 aa8.03□□□□□ -1.12
LDB16YCL005W CSN12P47130 423 aa8.02□□□□□ -1.13
LDB16YCL005W ISU2Q12056 156 aa8.02□□□□□ -1.13
LDB16YCL005W ENT1Q12518 454 aa8.02□□□□□ -1.13
LDB16YCL005W YRF1-4O13559 1382 aa8.01□□□□□ -1.13
LDB16YCL005W FUN12P39730 1002 aaKnown RBP8.01□□□□□ -1.13
LDB16YCL005W XKS1P42826 600 aa8.01□□□□□ -1.13
LDB16YCL005W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
LDB16YCL005W RSF2P46974 1380 aa8□□□□□ -1.13
LDB16YCL005W HSP104P31539 908 aaKnown RBP8□□□□□ -1.13
LDB16YCL005W PTC2P39966 464 aaKnown RBP8□□□□□ -1.13
LDB16YCL005W YNL050CP53952 270 aa8□□□□□ -1.13
LDB16YCL005W HEF3P53978 1044 aaKnown RBP8□□□□□ -1.13
LDB16YCL005W CTF4Q01454 927 aa8□□□□□ -1.13
LDB16YCL005W RTT109Q07794 436 aa8□□□□□ -1.13
LDB16YCL005W NTH2P35172 780 aa7.99□□□□□ -1.13
LDB16YCL005W YML082WQ04533 649 aaKnown RBP7.99□□□□□ -1.13
LDB16YCL005W TUM1Q08686 304 aaKnown RBP7.99□□□□□ -1.13
LDB16YCL005W BRL1P38770 471 aa7.98□□□□□ -1.13
LDB16YCL005W FPR3P38911 411 aaKnown RBP7.98□□□□□ -1.13
LDB16YCL005W NMA111P53920 997 aa7.98□□□□□ -1.13
LDB16YCL005W AOS1Q06624 347 aa7.98□□□□□ -1.13
LDB16YCL005W ENV9Q08651 330 aa7.98□□□□□ -1.13
LDB16YCL005W YRF1-3P0CX14 1859 aa7.98□□□□□ -1.13
LDB16YCL005W YRF1-7P0CX15 1859 aa7.98□□□□□ -1.13
LDB16YCL005W YRF1-6P53819 1859 aa7.98□□□□□ -1.13
LDB16YCL005W SIR4P11978 1358 aa7.97□□□□□ -1.13
LDB16YCL005W RAD2P07276 1031 aa7.97□□□□□ -1.13
LDB16YCL005W MAM1P40065 302 aa7.97□□□□□ -1.13
LDB16YCL005W GYP7P48365 746 aa7.97□□□□□ -1.13
LDB16YCL005W ZDS1P50111 915 aaKnown RBP7.97□□□□□ -1.13
LDB16YCL005W APP1P53933 587 aa7.97□□□□□ -1.13
LDB16YCL005W BUD27P43573 796 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
LDB16YCL005W RRT14P40470 206 aa7.95□□□□□ -1.14
LDB16YCL005W HST2P53686 357 aa7.95□□□□□ -1.14
LDB16YCL005W NIS1P53939 407 aa7.95□□□□□ -1.14
LDB16YCL005W MEC3Q02574 474 aa7.95□□□□□ -1.14
LDB16YCL005W YRR1Q12172 810 aa7.95□□□□□ -1.14
LDB16YCL005W GLN1P32288 370 aaKnown RBP7.94□□□□□ -1.14
LDB16YCL005W FPK1P53739 893 aa7.94□□□□□ -1.14
LDB16YCL005W IMH1Q06704 911 aaKnown RBP7.94□□□□□ -1.14
LDB16YCL005W DAL5P15365 543 aa7.93□□□□□ -1.14
LDB16YCL005W UGA3P26370 528 aa7.93□□□□□ -1.14
LDB16YCL005W YIL092WP40497 633 aa7.93□□□□□ -1.14
LDB16YCL005W YFR016CP43597 1233 aaKnown RBP7.93□□□□□ -1.14
LDB16YCL005W TFB3Q03290 321 aa7.93□□□□□ -1.14
LDB16YCL005W NSE3Q05541 303 aa7.93□□□□□ -1.14
LDB16YCL005W RLF2Q12495 606 aa7.93□□□□□ -1.14
LDB16YCL005W SIT4P20604 311 aa7.92□□□□□ -1.14
LDB16YCL005W KCC4P25389 1037 aa7.92□□□□□ -1.14
LDB16YCL005W INP54Q08227 384 aaKnown RBP7.92□□□□□ -1.14
LDB16YCL005W EDE1P34216 1381 aa7.92□□□□□ -1.14
LDB16YCL005W YKL133CP36066 463 aa7.91□□□□□ -1.14
LDB16YCL005W BMS1Q08965 1183 aaKnown RBP7.91□□□□□ -1.14
LDB16YCL005W MMP1Q12372 583 aa7.91□□□□□ -1.14
LDB16YCL005W NUP145P49687 1317 aa7.91□□□□□ -1.14
LDB16YCL005W YBR287WP38355 427 aa7.9□□□□□ -1.14
LDB16YCL005W ROM2P51862 1356 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms