RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DCAF8Q5TAQ9 597 aa7.47□□□□□ -1.21
LINC00550-201ENST00000629293 CEP170BQ9Y4F5 1589 aaPredicted RBP7.47□□□□□ -1.21
LINC00550-201ENST00000629293 CEP162Q5TB80 1403 aa7.46□□□□□ -1.21
LINC00550-201ENST00000629293 LMOD2Q6P5Q4 547 aa7.46□□□□□ -1.22
LINC00550-201ENST00000629293 STK24Q9Y6E0 443 aa7.45□□□□□ -1.22
LINC00550-201ENST00000629293 MYO3AQ8NEV4 1616 aa7.45□□□□□ -1.22
LINC00550-201ENST00000629293 A2ML1A8K2U0 1454 aa7.45□□□□□ -1.22
LINC00550-201ENST00000629293 TCOF1Q13428 1488 aaKnown RBP7.45□□□□□ -1.22
LINC00550-201ENST00000629293 MBD5Q9P267 1494 aa7.45□□□□□ -1.22
LINC00550-201ENST00000629293 PLA2R1Q13018 1463 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 NCOA2Q15596 1464 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 RBM33Q96EV2 1170 aaKnown RBP7.44□□□□□ -1.22
LINC00550-201ENST00000629293 TIAM1Q13009 1591 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 INO80Q9ULG1 1556 aaPredicted RBP7.44□□□□□ -1.22
LINC00550-201ENST00000629293 CCDC141Q6ZP82 1450 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 HRCP23327 699 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 CHIC2Q9UKJ5 165 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 MIA2Q96PC5 1412 aa7.44□□□□□ -1.22
LINC00550-201ENST00000629293 KANK4Q5T7N3 995 aaPredicted RBP7.43□□□□□ -1.22
LINC00550-201ENST00000629293 FAM212AQ96EL1 285 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 RRP7BPQ9NSQ0 103 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 EHBP1L1Q8N3D4 1523 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 CFAP65Q6ZU64 1925 aaKnown RBP7.43□□□□□ -1.22
LINC00550-201ENST00000629293 PLXNC1O60486 1568 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 SHANK2Q9UPX8 1470 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 RSPH4AQ5TD94 716 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 TXNDC2Q86VQ3 553 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 FAM135AQ9P2D6 1515 aa7.43□□□□□ -1.22
LINC00550-201ENST00000629293 IQSEC2Q5JU85 1478 aa7.42□□□□□ -1.22
LINC00550-201ENST00000629293 MROH2AA6NES4 1674 aa7.42□□□□□ -1.22
LINC00550-201ENST00000629293 RTEL1-TNFRSF6BF6WH68 1400 aa7.42□□□□□ -1.22
LINC00550-201ENST00000629293 NPHP4O75161 1426 aaPredicted RBP7.42□□□□□ -1.22
LINC00550-201ENST00000629293 DNMT1P26358 1616 aaKnown RBP7.42□□□□□ -1.22
LINC00550-201ENST00000629293 PYGBP11216 843 aa7.42□□□□□ -1.22
LINC00550-201ENST00000629293 UGGT1Q9NYU2 1555 aa7.41□□□□□ -1.22
LINC00550-201ENST00000629293 PZPP20742 1482 aa7.41□□□□□ -1.22
LINC00550-201ENST00000629293 ZC3H15Q8WU90 426 aaKnown RBP7.4□□□□□ -1.22
LINC00550-201ENST00000629293 EID1Q9Y6B2 187 aa7.4□□□□□ -1.22
LINC00550-201ENST00000629293 ADGBQ8N7X0 1667 aa7.4□□□□□ -1.22
LINC00550-201ENST00000629293 KDM5DQ9BY66 1539 aa7.4□□□□□ -1.22
LINC00550-201ENST00000629293 SLC26A8Q96RN1 970 aa7.4□□□□□ -1.22
LINC00550-201ENST00000629293 LTKP29376 864 aa7.4□□□□□ -1.23
LINC00550-201ENST00000629293 MFRPQ9BY79 579 aa7.4□□□□□ -1.23
LINC00550-201ENST00000629293 PCGF6Q9BYE7 350 aa7.4□□□□□ -1.23
LINC00550-201ENST00000629293 RYDENQ9NUL5 291 aaKnown RBP7.39□□□□□ -1.23
LINC00550-201ENST00000629293 ZNF142P52746 1687 aaPredicted RBP7.38□□□□□ -1.23
LINC00550-201ENST00000629293 C14orf37Q86TY3 774 aa7.38□□□□□ -1.23
LINC00550-201ENST00000629293 NLRP1Q9C000 1473 aa7.38□□□□□ -1.23
LINC00550-201ENST00000629293 FAM50AQ14320 339 aaKnown RBP7.37□□□□□ -1.23
LINC00550-201ENST00000629293 SRCAPQ6ZRS2 3230 aa7.37□□□□□ -1.23
LINC00550-201ENST00000629293 CPS1P31327 1500 aa7.37□□□□□ -1.23
LINC00550-201ENST00000629293 NEURL4Q96JN8 1562 aa7.37□□□□□ -1.23
LINC00550-201ENST00000629293 PROSER2Q86WR7 435 aaPredicted RBP7.37□□□□□ -1.23
LINC00550-201ENST00000629293 KIF15Q9NS87 1388 aa7.37□□□□□ -1.23
LINC00550-201ENST00000629293 MED1Q15648 1581 aaPredicted RBP7.37□□□□□ -1.23
LINC00550-201ENST00000629293 TESPA1A2RU30 521 aaPredicted RBP7.36□□□□□ -1.23
LINC00550-201ENST00000629293 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
LINC00550-201ENST00000629293 NUTM2DQ5VT03 806 aaPredicted RBP7.36□□□□□ -1.23
LINC00550-201ENST00000629293 LRRC9Q6ZRR7 1453 aa7.36□□□□□ -1.23
LINC00550-201ENST00000629293 VPS8Q8N3P4 1428 aa7.36□□□□□ -1.23
LINC00550-201ENST00000629293 PPP1R37O75864 691 aa7.36□□□□□ -1.23
LINC00550-201ENST00000629293 IDI1Q13907 227 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
LINC00550-201ENST00000629293 ERVK-7P63135 1459 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 HOMEZQ8IX15 550 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 ABCC3O15438 1527 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 KANK1Q14678 1352 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 LRRC7Q96NW7 1537 aa7.35□□□□□ -1.23
LINC00550-201ENST00000629293 POLR1AO95602 1720 aaPredicted RBP7.34□□□□□ -1.23
LINC00550-201ENST00000629293 SCAF11Q99590 1463 aaKnown RBP7.34□□□□□ -1.23
LINC00550-201ENST00000629293 ITGAEP38570 1179 aa7.34□□□□□ -1.23
LINC00550-201ENST00000629293 MYOM3Q5VTT5 1437 aa7.34□□□□□ -1.23
LINC00550-201ENST00000629293 TMEM94Q12767 1356 aa7.34□□□□□ -1.23
LINC00550-201ENST00000629293 VWDEQ8N2E2 1590 aa7.34□□□□□ -1.23
LINC00550-201ENST00000629293 TRIM26Q12899 539 aaPredicted RBP7.34□□□□□ -1.23
LINC00550-201ENST00000629293 FBXO22Q8NEZ5 403 aa7.34□□□□□ -1.23
LINC00550-201ENST00000629293 ARHGEF1Q92888 912 aaKnown RBP7.33□□□□□ -1.24
LINC00550-201ENST00000629293 ZMYND10O75800 440 aa7.33□□□□□ -1.24
LINC00550-201ENST00000629293 SLC24A3Q9HC58 644 aa7.33□□□□□ -1.24
LINC00550-201ENST00000629293 SEMA3EO15041 775 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 PPARGC1BQ86YN6 1023 aaKnown RBP7.32□□□□□ -1.24
LINC00550-201ENST00000629293 AKT1S1Q96B36 256 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 RGS17Q9UGC6 210 aaPredicted RBP7.32□□□□□ -1.24
LINC00550-201ENST00000629293 IQGAP1P46940 1657 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 MED14O60244 1454 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 ARHGEF5Q12774 1597 aa7.32□□□□□ -1.24
LINC00550-201ENST00000629293 TMEM2Q9UHN6 1383 aa7.31□□□□□ -1.24
LINC00550-201ENST00000629293 ABCC5O15440 1437 aa7.31□□□□□ -1.24
LINC00550-201ENST00000629293 MEX3CQ5U5Q3 659 aaKnown RBP7.31□□□□□ -1.24
LINC00550-201ENST00000629293 REM2Q8IYK8 340 aaPredicted RBP7.31□□□□□ -1.24
LINC00550-201ENST00000629293 CEP152O94986 1710 aa7.31□□□□□ -1.24
LINC00550-201ENST00000629293 PRR29P0C7W0 189 aa7.3□□□□□ -1.24
LINC00550-201ENST00000629293 KCNA6P17658 529 aa7.3□□□□□ -1.24
LINC00550-201ENST00000629293 ANKRD30AQ9BXX3 1397 aa7.3□□□□□ -1.24
LINC00550-201ENST00000629293 DUOX2Q9NRD8 1548 aa7.3□□□□□ -1.24
LINC00550-201ENST00000629293 ALKQ9UM73 1620 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 TRIM52Q96A61 297 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms