RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-209ENST00000606299 RBM33Q96EV2 1170 aaKnown RBP15.43■□□□□ 0.06
CSNK1A1-209ENST00000606299 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
CSNK1A1-209ENST00000606299 MAP3K7O43318 606 aa15.41■□□□□ 0.06
CSNK1A1-209ENST00000606299 RABGEF1Q9UJ41 708 aa15.4■□□□□ 0.06
CSNK1A1-209ENST00000606299 GRXCR2A6NFK2 248 aa15.39■□□□□ 0.05
CSNK1A1-209ENST00000606299 MRPL50Q8N5N7 158 aaKnown RBP15.39■□□□□ 0.05
CSNK1A1-209ENST00000606299 HCSTQ9UBK5 93 aa15.39■□□□□ 0.05
CSNK1A1-209ENST00000606299 ONECUT3O60422 494 aaPredicted RBP15.38■□□□□ 0.05
CSNK1A1-209ENST00000606299 PROX2Q3B8N5 592 aa15.37■□□□□ 0.05
CSNK1A1-209ENST00000606299 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
CSNK1A1-209ENST00000606299 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
CSNK1A1-209ENST00000606299 TSR1Q2NL82 804 aaKnown RBP15.35■□□□□ 0.05
CSNK1A1-209ENST00000606299 KCTD12Q96CX2 325 aaKnown RBP15.35■□□□□ 0.05
CSNK1A1-209ENST00000606299 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
CSNK1A1-209ENST00000606299 CERKQ8TCT0 537 aa15.34■□□□□ 0.05
CSNK1A1-209ENST00000606299 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
CSNK1A1-209ENST00000606299 OSBPP22059 807 aa15.33■□□□□ 0.04
CSNK1A1-209ENST00000606299 ARHGAP35Q9NRY4 1499 aa15.33■□□□□ 0.04
CSNK1A1-209ENST00000606299 GOLGA8CPA6NN73 597 aa15.32■□□□□ 0.04
CSNK1A1-209ENST00000606299 TRIM6-TRIM34B2RNG4 842 aa15.32■□□□□ 0.04
CSNK1A1-209ENST00000606299 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
CSNK1A1-209ENST00000606299 HAP1P54257 671 aaPredicted RBP15.31■□□□□ 0.04
CSNK1A1-209ENST00000606299 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
CSNK1A1-209ENST00000606299 PPARGC1BQ86YN6 1023 aaKnown RBP15.3■□□□□ 0.04
CSNK1A1-209ENST00000606299 EFCAB5A4FU69 1503 aa15.29■□□□□ 0.04
CSNK1A1-209ENST00000606299 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
CSNK1A1-209ENST00000606299 KIAA1468Q9P260 1216 aa15.29■□□□□ 0.04
CSNK1A1-209ENST00000606299 CHD1O14646 1710 aa15.29■□□□□ 0.04
CSNK1A1-209ENST00000606299 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
CSNK1A1-209ENST00000606299 THSD4Q6ZMP0 1018 aa15.26■□□□□ 0.03
CSNK1A1-209ENST00000606299 WNT2BQ93097 391 aa15.26■□□□□ 0.03
CSNK1A1-209ENST00000606299 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
CSNK1A1-209ENST00000606299 SAMD9Q5K651 1589 aa15.26■□□□□ 0.03
CSNK1A1-209ENST00000606299 TRIM26Q12899 539 aaPredicted RBP15.24■□□□□ 0.03
CSNK1A1-209ENST00000606299 GRIN2AQ12879 1464 aa15.24■□□□□ 0.03
CSNK1A1-209ENST00000606299 PRSS12P56730 875 aa15.23■□□□□ 0.03
CSNK1A1-209ENST00000606299 ANKK1Q8NFD2 765 aa15.23■□□□□ 0.03
CSNK1A1-209ENST00000606299 RBM27Q9P2N5 1060 aaKnown RBP15.23■□□□□ 0.03
CSNK1A1-209ENST00000606299 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
CSNK1A1-209ENST00000606299 MLLT3P42568 568 aaPredicted RBP15.22■□□□□ 0.03
CSNK1A1-209ENST00000606299 PACS2Q86VP3 889 aa15.22■□□□□ 0.03
CSNK1A1-209ENST00000606299 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
CSNK1A1-209ENST00000606299 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
CSNK1A1-209ENST00000606299 TTBK1Q5TCY1 1321 aaPredicted RBP15.21■□□□□ 0.03
CSNK1A1-209ENST00000606299 CDHR5Q9HBB8 845 aa15.21■□□□□ 0.03
CSNK1A1-209ENST00000606299 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
CSNK1A1-209ENST00000606299 CFAP43Q8NDM7 1665 aa15.2■□□□□ 0.02
CSNK1A1-209ENST00000606299 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
CSNK1A1-209ENST00000606299 TSKSQ9UJT2 592 aa15.2■□□□□ 0.02
CSNK1A1-209ENST00000606299 FHOD3Q2V2M9 1422 aa15.19■□□□□ 0.02
CSNK1A1-209ENST00000606299 SEPT9Q9UHD8 586 aaPredicted RBP15.19■□□□□ 0.02
CSNK1A1-209ENST00000606299 LRRIQ1Q96JM4 1722 aa15.17■□□□□ 0.02
CSNK1A1-209ENST00000606299 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
CSNK1A1-209ENST00000606299 PTPN5P54829 565 aa15.16■□□□□ 0.02
CSNK1A1-209ENST00000606299 NBPF26B4DH59 902 aa15.15■□□□□ 0.02
CSNK1A1-209ENST00000606299 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
CSNK1A1-209ENST00000606299 UGGT2Q9NYU1 1516 aa15.14■□□□□ 0.01
CSNK1A1-209ENST00000606299 KIAA0586Q9BVV6 1533 aa15.13■□□□□ 0.01
CSNK1A1-209ENST00000606299 SEMA3EO15041 775 aa15.13■□□□□ 0.01
CSNK1A1-209ENST00000606299 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
CSNK1A1-209ENST00000606299 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
CSNK1A1-209ENST00000606299 KIAA0556O60303 1618 aa15.13■□□□□ 0.01
CSNK1A1-209ENST00000606299 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
CSNK1A1-209ENST00000606299 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
CSNK1A1-209ENST00000606299 NPDC1Q9NQX5 325 aaPredicted RBP15.12■□□□□ 0.01
CSNK1A1-209ENST00000606299 PLA2G2EQ9NZK7 142 aa15.12■□□□□ 0.01
CSNK1A1-209ENST00000606299 FAM198AQ9UFP1 575 aa15.12■□□□□ 0.01
CSNK1A1-209ENST00000606299 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
CSNK1A1-209ENST00000606299 TTC13Q8NBP0 860 aa15.1■□□□□ 0.01
CSNK1A1-209ENST00000606299 NUP160Q12769 1436 aa15.09■□□□□ 0.01
CSNK1A1-209ENST00000606299 FMN1Q68DA7 1419 aa15.09■□□□□ 0.01
CSNK1A1-209ENST00000606299 BCAMP50895 628 aa15.08■□□□□ 0
CSNK1A1-209ENST00000606299 TESPA1A2RU30 521 aaPredicted RBP15.07■□□□□ 0
CSNK1A1-209ENST00000606299 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
CSNK1A1-209ENST00000606299 TATDN2Q93075 761 aa15.07■□□□□ 0
CSNK1A1-209ENST00000606299 LRCH3Q96II8 777 aa15.07■□□□□ 0
CSNK1A1-209ENST00000606299 CASKIN1Q8WXD9 1431 aa15.07■□□□□ 0
CSNK1A1-209ENST00000606299 MAP3K1Q13233 1512 aa15.07■□□□□ 0
CSNK1A1-209ENST00000606299 PTGDRQ13258 359 aa15.06■□□□□ 0
CSNK1A1-209ENST00000606299 PADI6Q6TGC4 694 aa15.06■□□□□ 0
CSNK1A1-209ENST00000606299 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.06■□□□□ 0
CSNK1A1-209ENST00000606299 PNMA3Q9UL41 463 aa15.06■□□□□ 0
CSNK1A1-209ENST00000606299 HECW1Q76N89 1606 aa15.06■□□□□ 0
CSNK1A1-209ENST00000606299 SMYD5Q6GMV2 418 aa15.05■□□□□ -0
CSNK1A1-209ENST00000606299 DISP1Q96F81 1524 aa15.04■□□□□ -0
CSNK1A1-209ENST00000606299 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
CSNK1A1-209ENST00000606299 SMAPO00193 183 aa15.03■□□□□ -0
CSNK1A1-209ENST00000606299 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
CSNK1A1-209ENST00000606299 KANK4Q5T7N3 995 aaPredicted RBP15.01□□□□□ -0.01
CSNK1A1-209ENST00000606299 NUDT18Q6ZVK8 323 aa15.01□□□□□ -0.01
CSNK1A1-209ENST00000606299 TSR3Q9UJK0 312 aaKnown RBP15.01□□□□□ -0.01
CSNK1A1-209ENST00000606299 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
CSNK1A1-209ENST00000606299 C3orf80F5H4A9 247 aa15□□□□□ -0.01
CSNK1A1-209ENST00000606299 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
CSNK1A1-209ENST00000606299 LRRC9Q6ZRR7 1453 aa14.99□□□□□ -0.01
CSNK1A1-209ENST00000606299 FCHSD2O94868 740 aa14.98□□□□□ -0.01
CSNK1A1-209ENST00000606299 IFFO2Q5TF58 517 aa14.98□□□□□ -0.01
CSNK1A1-209ENST00000606299 WBP1LQ9NX94 342 aa14.97□□□□□ -0.01
CSNK1A1-209ENST00000606299 HPS5Q9UPZ3 1129 aa14.97□□□□□ -0.01
CSNK1A1-209ENST00000606299 CARMIL2Q6F5E8 1435 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms