RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 CLIP1P30622 1438 aa13.13□□□□□ -0.31
FARP1-220ENST00000596613 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-220ENST00000596613 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
FARP1-220ENST00000596613 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
FARP1-220ENST00000596613 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-220ENST00000596613 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-220ENST00000596613 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
FARP1-220ENST00000596613 NEO1Q92859 1461 aa13.1□□□□□ -0.31
FARP1-220ENST00000596613 ABCA9Q8IUA7 1624 aa13.1□□□□□ -0.31
FARP1-220ENST00000596613 EFCAB2Q5VUJ9 269 aa13.1□□□□□ -0.31
FARP1-220ENST00000596613 MYT1LQ9UL68 1186 aa13.1□□□□□ -0.31
FARP1-220ENST00000596613 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
FARP1-220ENST00000596613 ARID4BQ4LE39 1312 aaPredicted RBP13.09□□□□□ -0.31
FARP1-220ENST00000596613 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.31
FARP1-220ENST00000596613 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
FARP1-220ENST00000596613 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-220ENST00000596613 KDM4FA0A1W2PPD8 638 aa13.07□□□□□ -0.32
FARP1-220ENST00000596613 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-220ENST00000596613 PPP1R15BQ5SWA1 713 aa13.06□□□□□ -0.32
FARP1-220ENST00000596613 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
FARP1-220ENST00000596613 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 CASKIN1Q8WXD9 1431 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 FANCAO15360 1455 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 CAMK2BQ13554 666 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 CFAP74Q9C0B2 1584 aa13.05□□□□□ -0.32
FARP1-220ENST00000596613 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
FARP1-220ENST00000596613 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
FARP1-220ENST00000596613 PLCH2O75038 1416 aa13.03□□□□□ -0.32
FARP1-220ENST00000596613 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.03□□□□□ -0.32
FARP1-220ENST00000596613 DSG2Q14126 1118 aa13.02□□□□□ -0.33
FARP1-220ENST00000596613 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-220ENST00000596613 ARIH1Q9Y4X5 557 aaPredicted RBP13.01□□□□□ -0.33
FARP1-220ENST00000596613 KIF14Q15058 1648 aa13□□□□□ -0.33
FARP1-220ENST00000596613 ADGRL1O94910 1474 aa13□□□□□ -0.33
FARP1-220ENST00000596613 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
FARP1-220ENST00000596613 SCAPERQ9BY12 1400 aa12.99□□□□□ -0.33
FARP1-220ENST00000596613 FOXK1P85037 733 aa12.99□□□□□ -0.33
FARP1-220ENST00000596613 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
FARP1-220ENST00000596613 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
FARP1-220ENST00000596613 ZNF777Q9ULD5 760 aaPredicted RBP12.98□□□□□ -0.33
FARP1-220ENST00000596613 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
FARP1-220ENST00000596613 POGZQ7Z3K3 1410 aa12.97□□□□□ -0.33
FARP1-220ENST00000596613 SEMA3EO15041 775 aa12.97□□□□□ -0.33
FARP1-220ENST00000596613 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-220ENST00000596613 CEP162Q5TB80 1403 aa12.96□□□□□ -0.33
FARP1-220ENST00000596613 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.332e-7■□□□□ 8.8
FARP1-220ENST00000596613 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
FARP1-220ENST00000596613 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
FARP1-220ENST00000596613 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
FARP1-220ENST00000596613 PCF11O94913 1555 aaKnown RBP12.94□□□□□ -0.34
FARP1-220ENST00000596613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.94□□□□□ -0.34
FARP1-220ENST00000596613 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
FARP1-220ENST00000596613 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
FARP1-220ENST00000596613 CFDP1Q9UEE9 299 aaPredicted RBP12.94□□□□□ -0.34
FARP1-220ENST00000596613 CCNB3Q8WWL7 1395 aa12.94□□□□□ -0.34
FARP1-220ENST00000596613 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
FARP1-220ENST00000596613 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-220ENST00000596613 PLPP6Q8IY26 295 aa12.93□□□□□ -0.34
FARP1-220ENST00000596613 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-220ENST00000596613 AFAP1Q8N556 730 aa12.92□□□□□ -0.34
FARP1-220ENST00000596613 MLECQ14165 292 aa12.91□□□□□ -0.34
FARP1-220ENST00000596613 LMOD2Q6P5Q4 547 aa12.91□□□□□ -0.34
FARP1-220ENST00000596613 ZNF518AQ6AHZ1 1483 aa12.91□□□□□ -0.34
FARP1-220ENST00000596613 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-220ENST00000596613 TULP1O00294 542 aaPredicted RBP12.9□□□□□ -0.34
FARP1-220ENST00000596613 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-220ENST00000596613 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
FARP1-220ENST00000596613 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-220ENST00000596613 DPYSL4O14531 572 aa12.88□□□□□ -0.35
FARP1-220ENST00000596613 ATP10AO60312 1499 aa12.87□□□□□ -0.35
FARP1-220ENST00000596613 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-220ENST00000596613 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-220ENST00000596613 RICTORQ6R327 1708 aa12.87□□□□□ -0.35
FARP1-220ENST00000596613 PLEKHH2Q8IVE3 1493 aa12.86□□□□□ -0.35
FARP1-220ENST00000596613 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
FARP1-220ENST00000596613 HNRNPMP52272 730 aaKnown RBP eCLIP12.86□□□□□ -0.35
FARP1-220ENST00000596613 SPAG9O60271 1321 aaKnown RBP12.86□□□□□ -0.35
FARP1-220ENST00000596613 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
FARP1-220ENST00000596613 RSPH4AQ5TD94 716 aa12.85□□□□□ -0.35
FARP1-220ENST00000596613 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-220ENST00000596613 FRMPD1Q5SYB0 1578 aa12.85□□□□□ -0.35
FARP1-220ENST00000596613 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
FARP1-220ENST00000596613 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-220ENST00000596613 C9orf84Q5VXU9 1444 aa12.84□□□□□ -0.35
FARP1-220ENST00000596613 YEATS2Q9ULM3 1422 aa12.84□□□□□ -0.35
FARP1-220ENST00000596613 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-220ENST00000596613 PREX2Q70Z35 1606 aa12.83□□□□□ -0.36
FARP1-220ENST00000596613 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.36
FARP1-220ENST00000596613 VPS8Q8N3P4 1428 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 TSPY4P0CV99 314 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 TSPY10P0CW01 314 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 PDIA6Q15084 440 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 SMYD5Q6GMV2 418 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
FARP1-220ENST00000596613 PTPRMP28827 1452 aa12.81□□□□□ -0.36
FARP1-220ENST00000596613 SPDYE16A6NNV3 312 aaPredicted RBP12.81□□□□□ -0.36
FARP1-220ENST00000596613 KIAA1107Q9UPP5 1409 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms