RNA–Protein interactions for RNA: ENST00000560885.5

USP8-213, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-213ENST00000560885 MED1Q15648 1581 aaPredicted RBP10.39□□□□□ -0.75
USP8-213ENST00000560885 TNRQ92752 1358 aa10.39□□□□□ -0.75
USP8-213ENST00000560885 TOM1O60784 492 aa10.38□□□□□ -0.75
USP8-213ENST00000560885 CEP162Q5TB80 1403 aa10.38□□□□□ -0.75
USP8-213ENST00000560885 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
USP8-213ENST00000560885 NLRP1Q9C000 1473 aa10.37□□□□□ -0.75
USP8-213ENST00000560885 ATN1P54259 1190 aaPredicted RBP10.37□□□□□ -0.75
USP8-213ENST00000560885 VWDEQ8N2E2 1590 aa10.37□□□□□ -0.75
USP8-213ENST00000560885 UGGT1Q9NYU2 1555 aa10.37□□□□□ -0.75
USP8-213ENST00000560885 IQGAP1P46940 1657 aa10.37□□□□□ -0.75
USP8-213ENST00000560885 MED14O60244 1454 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 KIF3BO15066 747 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 HSPA1LP34931 641 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 PIP4K2BP78356 416 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
USP8-213ENST00000560885 RSPH4AQ5TD94 716 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
USP8-213ENST00000560885 ANKLE2Q86XL3 938 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 THEMISQ8N1K5 641 aaPredicted RBP10.36□□□□□ -0.75
USP8-213ENST00000560885 PROM2Q8N271 834 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 ZC3H13Q5T200 1668 aaKnown RBP10.36□□□□□ -0.75
USP8-213ENST00000560885 CAMSAP2Q08AD1 1489 aa10.36□□□□□ -0.75
USP8-213ENST00000560885 ARHGEF5Q12774 1597 aa10.35□□□□□ -0.75
USP8-213ENST00000560885 MIA2Q96PC5 1412 aa10.35□□□□□ -0.75
USP8-213ENST00000560885 KIF12Q96FN5 646 aa10.35□□□□□ -0.75
USP8-213ENST00000560885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.35□□□□□ -0.75
USP8-213ENST00000560885 RNF17Q9BXT8 1623 aaKnown RBP10.34□□□□□ -0.75
USP8-213ENST00000560885 TIE1P35590 1138 aa10.34□□□□□ -0.75
USP8-213ENST00000560885 TSPYL2Q9H2G4 693 aaPredicted RBP10.34□□□□□ -0.75
USP8-213ENST00000560885 STRCP1A6NGW2 1772 aa10.34□□□□□ -0.75
USP8-213ENST00000560885 ALKQ9UM73 1620 aa10.33□□□□□ -0.76
USP8-213ENST00000560885 NCOA2Q15596 1464 aa10.33□□□□□ -0.76
USP8-213ENST00000560885 SYNMO15061 1565 aa10.33□□□□□ -0.76
USP8-213ENST00000560885 EIF2AK4Q9P2K8 1649 aaKnown RBP10.33□□□□□ -0.76
USP8-213ENST00000560885 NPHP4O75161 1426 aaPredicted RBP10.33□□□□□ -0.76
USP8-213ENST00000560885 UBR1Q8IWV7 1749 aa10.31□□□□□ -0.76
USP8-213ENST00000560885 FAM163AQ96GL9 167 aaPredicted RBP10.31□□□□□ -0.76
USP8-213ENST00000560885 BMP2KQ9NSY1 1161 aaPredicted RBP10.31□□□□□ -0.76
USP8-213ENST00000560885 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
USP8-213ENST00000560885 PLEKHG5O94827 1062 aa10.3□□□□□ -0.76
USP8-213ENST00000560885 TSPY4P0CV99 314 aa10.3□□□□□ -0.76
USP8-213ENST00000560885 TSPY10P0CW01 314 aa10.3□□□□□ -0.76
USP8-213ENST00000560885 CFAP65Q6ZU64 1925 aaKnown RBP10.3□□□□□ -0.76
USP8-213ENST00000560885 CEP152O94986 1710 aa10.3□□□□□ -0.76
USP8-213ENST00000560885 ABCC3O15438 1527 aa10.29□□□□□ -0.76
USP8-213ENST00000560885 LRRC7Q96NW7 1537 aa10.29□□□□□ -0.76
USP8-213ENST00000560885 XIRP1Q702N8 1843 aaKnown RBP10.28□□□□□ -0.76
USP8-213ENST00000560885 MROH1Q8NDA8 1641 aa10.27□□□□□ -0.77
USP8-213ENST00000560885 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
USP8-213ENST00000560885 ERVK-7P63135 1459 aa10.27□□□□□ -0.77
USP8-213ENST00000560885 IER5LQ5T953 404 aa10.26□□□□□ -0.77
USP8-213ENST00000560885 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
USP8-213ENST00000560885 LRRC9Q6ZRR7 1453 aa10.24□□□□□ -0.77
USP8-213ENST00000560885 SCAF11Q99590 1463 aaKnown RBP10.24□□□□□ -0.77
USP8-213ENST00000560885 SLIT1O75093 1534 aa10.24□□□□□ -0.77
USP8-213ENST00000560885 DUOX2Q9NRD8 1548 aa10.24□□□□□ -0.77
USP8-213ENST00000560885 SGIP1Q9BQI5 828 aa10.24□□□□□ -0.77
USP8-213ENST00000560885 ARHGAP23Q9P227 1491 aa10.23□□□□□ -0.77
USP8-213ENST00000560885 MAP3K13O43283 966 aa10.23□□□□□ -0.77
USP8-213ENST00000560885 PRDM15P57071 1507 aaPredicted RBP10.23□□□□□ -0.77
USP8-213ENST00000560885 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
USP8-213ENST00000560885 SEC24BO95487 1268 aa10.22□□□□□ -0.77
USP8-213ENST00000560885 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
USP8-213ENST00000560885 PIK3C2BO00750 1634 aa10.22□□□□□ -0.77
USP8-213ENST00000560885 TTLL13PA6NNM8 815 aa10.21□□□□□ -0.77
USP8-213ENST00000560885 MYOM3Q5VTT5 1437 aa10.21□□□□□ -0.78
USP8-213ENST00000560885 MAP3K1Q13233 1512 aa10.21□□□□□ -0.78
USP8-213ENST00000560885 LTKP29376 864 aa10.2□□□□□ -0.78
USP8-213ENST00000560885 TXNDC2Q86VQ3 553 aa10.2□□□□□ -0.78
USP8-213ENST00000560885 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
USP8-213ENST00000560885 VPS8Q8N3P4 1428 aa10.19□□□□□ -0.78
USP8-213ENST00000560885 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
USP8-213ENST00000560885 TRPC6Q9Y210 931 aa10.19□□□□□ -0.78
USP8-213ENST00000560885 FAM135BQ49AJ0 1406 aa10.18□□□□□ -0.78
USP8-213ENST00000560885 RGS17Q9UGC6 210 aaPredicted RBP10.18□□□□□ -0.78
USP8-213ENST00000560885 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
USP8-213ENST00000560885 TMEM2Q9UHN6 1383 aa10.17□□□□□ -0.78
USP8-213ENST00000560885 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
USP8-213ENST00000560885 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
USP8-213ENST00000560885 KIF15Q9NS87 1388 aa10.16□□□□□ -0.78
USP8-213ENST00000560885 TET3O43151 1660 aa10.16□□□□□ -0.78
USP8-213ENST00000560885 CDAN1Q8IWY9 1227 aa10.16□□□□□ -0.78
USP8-213ENST00000560885 COLQQ9Y215 455 aaPredicted RBP10.16□□□□□ -0.78
USP8-213ENST00000560885 KANK1Q14678 1352 aa10.15□□□□□ -0.78
USP8-213ENST00000560885 PTPN23Q9H3S7 1636 aa10.15□□□□□ -0.78
USP8-213ENST00000560885 KANK4Q5T7N3 995 aaPredicted RBP10.15□□□□□ -0.78
USP8-213ENST00000560885 LMTK2Q8IWU2 1503 aa10.15□□□□□ -0.78
USP8-213ENST00000560885 MIER1Q8N108 512 aa10.14□□□□□ -0.79
USP8-213ENST00000560885 TRIM35Q9UPQ4 493 aa10.14□□□□□ -0.79
USP8-213ENST00000560885 ABCC5O15440 1437 aa10.14□□□□□ -0.79
USP8-213ENST00000560885 NWD1Q149M9 1564 aa10.14□□□□□ -0.79
USP8-213ENST00000560885 TMEM94Q12767 1356 aa10.14□□□□□ -0.79
USP8-213ENST00000560885 NKTRP30414 1462 aaKnown RBP10.13□□□□□ -0.79
USP8-213ENST00000560885 CHD2O14647 1828 aaKnown RBP10.13□□□□□ -0.79
USP8-213ENST00000560885 KCNA6P17658 529 aa10.13□□□□□ -0.79
USP8-213ENST00000560885 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
USP8-213ENST00000560885 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
USP8-213ENST00000560885 PHLPP1O60346 1717 aa10.13□□□□□ -0.79
USP8-213ENST00000560885 IDI1Q13907 227 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms