RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
CHD8-210ENST00000555962 KDM5AP29375 1690 aaKnown RBP13.34□□□□□ -0.27
CHD8-210ENST00000555962 PTPRTO14522 1441 aa13.34□□□□□ -0.27
CHD8-210ENST00000555962 PKD2Q13563 968 aa13.34□□□□□ -0.27
CHD8-210ENST00000555962 MPHOSPH9Q99550 1183 aa13.34□□□□□ -0.27
CHD8-210ENST00000555962 CLTCL1P53675 1640 aa13.34□□□□□ -0.27
CHD8-210ENST00000555962 PLA2R1Q13018 1463 aa13.34□□□□□ -0.27
CHD8-210ENST00000555962 POLR1AO95602 1720 aaPredicted RBP13.33□□□□□ -0.27
CHD8-210ENST00000555962 HRCP23327 699 aa13.33□□□□□ -0.28
CHD8-210ENST00000555962 POLA2Q14181 598 aa13.33□□□□□ -0.28
CHD8-210ENST00000555962 TRPM2O94759 1503 aa13.33□□□□□ -0.28
CHD8-210ENST00000555962 KIF1BO60333 1816 aa13.32□□□□□ -0.28
CHD8-210ENST00000555962 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
CHD8-210ENST00000555962 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
CHD8-210ENST00000555962 IDI1Q13907 227 aa13.32□□□□□ -0.28
CHD8-210ENST00000555962 ADGRB3O60242 1522 aa13.32□□□□□ -0.28
CHD8-210ENST00000555962 ACIN1Q9UKV3 1341 aaKnown RBP13.32□□□□□ -0.28
CHD8-210ENST00000555962 SLC52A1Q9NWF4 448 aa13.29□□□□□ -0.28
CHD8-210ENST00000555962 CAPN15O75808 1086 aa13.28□□□□□ -0.28
CHD8-210ENST00000555962 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
CHD8-210ENST00000555962 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
CHD8-210ENST00000555962 ARHGAP23Q9P227 1491 aa13.27□□□□□ -0.29
CHD8-210ENST00000555962 SLIT1O75093 1534 aa13.27□□□□□ -0.29
CHD8-210ENST00000555962 NCKAP5LQ9HCH0 1330 aa13.25□□□□□ -0.29
CHD8-210ENST00000555962 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
CHD8-210ENST00000555962 TMEM2Q9UHN6 1383 aa13.24□□□□□ -0.29
CHD8-210ENST00000555962 PCGF6Q9BYE7 350 aa13.24□□□□□ -0.29
CHD8-210ENST00000555962 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
CHD8-210ENST00000555962 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
CHD8-210ENST00000555962 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
CHD8-210ENST00000555962 ZFYVE9O95405 1425 aa13.22□□□□□ -0.29
CHD8-210ENST00000555962 LTKP29376 864 aa13.22□□□□□ -0.29
CHD8-210ENST00000555962 PPLO60437 1756 aa13.22□□□□□ -0.29
CHD8-210ENST00000555962 SCAF11Q99590 1463 aaKnown RBP13.22□□□□□ -0.29
CHD8-210ENST00000555962 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
CHD8-210ENST00000555962 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
CHD8-210ENST00000555962 ANKRD30BQ9BXX2 1392 aa13.21□□□□□ -0.29
CHD8-210ENST00000555962 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
CHD8-210ENST00000555962 MED14O60244 1454 aa13.21□□□□□ -0.3
CHD8-210ENST00000555962 RIMS2Q9UQ26 1411 aa13.21□□□□□ -0.3
CHD8-210ENST00000555962 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
CHD8-210ENST00000555962 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
CHD8-210ENST00000555962 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
CHD8-210ENST00000555962 SPATA31E1Q6ZUB1 1445 aa13.19□□□□□ -0.3
CHD8-210ENST00000555962 DHX57Q6P158 1386 aaKnown RBP13.19□□□□□ -0.3
CHD8-210ENST00000555962 IFNLR1Q8IU57 520 aaPredicted RBP13.18□□□□□ -0.3
CHD8-210ENST00000555962 NUTM2DQ5VT03 806 aaPredicted RBP13.17□□□□□ -0.3
CHD8-210ENST00000555962 ZNF326Q5BKZ1 582 aaKnown RBP13.16□□□□□ -0.3
CHD8-210ENST00000555962 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
CHD8-210ENST00000555962 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
CHD8-210ENST00000555962 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
CHD8-210ENST00000555962 ZBTB12Q9Y330 459 aaPredicted RBP13.15□□□□□ -0.3
CHD8-210ENST00000555962 PLEKHG1Q9ULL1 1385 aa13.13□□□□□ -0.31
CHD8-210ENST00000555962 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
CHD8-210ENST00000555962 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
CHD8-210ENST00000555962 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
CHD8-210ENST00000555962 SETD1AO15047 1707 aaKnown RBP13.13□□□□□ -0.31
CHD8-210ENST00000555962 CHD2O14647 1828 aaKnown RBP13.12□□□□□ -0.31
CHD8-210ENST00000555962 PPP1R15AO75807 674 aaPredicted RBP13.12□□□□□ -0.31
CHD8-210ENST00000555962 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHD8-210ENST00000555962 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
CHD8-210ENST00000555962 SETBP1Q9Y6X0 1596 aa13.11□□□□□ -0.31
CHD8-210ENST00000555962 HDGFP51858 240 aaKnown RBP13.11□□□□□ -0.31
CHD8-210ENST00000555962 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
CHD8-210ENST00000555962 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
CHD8-210ENST00000555962 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
CHD8-210ENST00000555962 ZNF335Q9H4Z2 1342 aaPredicted RBP13.1□□□□□ -0.31
CHD8-210ENST00000555962 ABCB7O75027 752 aa13.09□□□□□ -0.31
CHD8-210ENST00000555962 DIP2AQ14689 1571 aa13.09□□□□□ -0.31
CHD8-210ENST00000555962 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
CHD8-210ENST00000555962 BCANQ96GW7 911 aa13.08□□□□□ -0.32
CHD8-210ENST00000555962 XIRP1Q702N8 1843 aaKnown RBP13.08□□□□□ -0.32
CHD8-210ENST00000555962 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
CHD8-210ENST00000555962 NWD1Q149M9 1564 aa13.07□□□□□ -0.32
CHD8-210ENST00000555962 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
CHD8-210ENST00000555962 MYOM2P54296 1465 aa13.06□□□□□ -0.32
CHD8-210ENST00000555962 VGFO15240 615 aaPredicted RBP13.06□□□□□ -0.32
CHD8-210ENST00000555962 NRXN1Q9ULB1 1477 aa13.05□□□□□ -0.32
CHD8-210ENST00000555962 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
CHD8-210ENST00000555962 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
CHD8-210ENST00000555962 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
CHD8-210ENST00000555962 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
CHD8-210ENST00000555962 METP08581 1390 aa13.03□□□□□ -0.32
CHD8-210ENST00000555962 PTPRUQ92729 1446 aa13.03□□□□□ -0.32
CHD8-210ENST00000555962 CPS1P31327 1500 aa13.03□□□□□ -0.32
CHD8-210ENST00000555962 LAMC1P11047 1609 aa13.02□□□□□ -0.32
CHD8-210ENST00000555962 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.33
CHD8-210ENST00000555962 ASXL1Q8IXJ9 1541 aa13.02□□□□□ -0.33
CHD8-210ENST00000555962 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
CHD8-210ENST00000555962 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
CHD8-210ENST00000555962 LRRC7Q96NW7 1537 aa13.01□□□□□ -0.33
CHD8-210ENST00000555962 KCNA6P17658 529 aa13□□□□□ -0.33
CHD8-210ENST00000555962 CERKQ8TCT0 537 aa13□□□□□ -0.33
CHD8-210ENST00000555962 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
CHD8-210ENST00000555962 L3MBTL2Q969R5 705 aa12.99□□□□□ -0.33
CHD8-210ENST00000555962 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
CHD8-210ENST00000555962 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
CHD8-210ENST00000555962 CFAP70Q5T0N1 1121 aa12.98□□□□□ -0.33
CHD8-210ENST00000555962 HAP1P54257 671 aaPredicted RBP12.97□□□□□ -0.33
CHD8-210ENST00000555962 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms