RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
CHD8-210ENST00000555962 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
CHD8-210ENST00000555962 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
CHD8-210ENST00000555962 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
CHD8-210ENST00000555962 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
CHD8-210ENST00000555962 ABCC9O60706 1549 aa18.67■□□□□ 0.58
CHD8-210ENST00000555962 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
CHD8-210ENST00000555962 PLPPR3Q6T4P5 718 aa18.19■□□□□ 0.5
CHD8-210ENST00000555962 ZCCHC6Q5VYS8 1495 aaKnown RBP18.08■□□□□ 0.49
CHD8-210ENST00000555962 NACADO15069 1562 aa18.02■□□□□ 0.48
CHD8-210ENST00000555962 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
CHD8-210ENST00000555962 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
CHD8-210ENST00000555962 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
CHD8-210ENST00000555962 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
CHD8-210ENST00000555962 UNC13AQ9UPW8 1703 aa17.75■□□□□ 0.43
CHD8-210ENST00000555962 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
CHD8-210ENST00000555962 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
CHD8-210ENST00000555962 PABPN1Q86U42 306 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHD8-210ENST00000555962 SHROOM4Q9ULL8 1493 aa17.24■□□□□ 0.35
CHD8-210ENST00000555962 ADRA2BP18089 450 aa17.03■□□□□ 0.32
CHD8-210ENST00000555962 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
CHD8-210ENST00000555962 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
CHD8-210ENST00000555962 FOXD1Q16676 465 aa16.97■□□□□ 0.31
CHD8-210ENST00000555962 CC2D2AQ9P2K1 1620 aa16.92■□□□□ 0.3
CHD8-210ENST00000555962 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
CHD8-210ENST00000555962 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
CHD8-210ENST00000555962 SMARCA4P51532 1647 aa16.82■□□□□ 0.28
CHD8-210ENST00000555962 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
CHD8-210ENST00000555962 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
CHD8-210ENST00000555962 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
CHD8-210ENST00000555962 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
CHD8-210ENST00000555962 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
CHD8-210ENST00000555962 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
CHD8-210ENST00000555962 WIZO95785 1651 aa16.59■□□□□ 0.25
CHD8-210ENST00000555962 KCNA4P22459 653 aa16.58■□□□□ 0.24
CHD8-210ENST00000555962 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
CHD8-210ENST00000555962 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
CHD8-210ENST00000555962 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
CHD8-210ENST00000555962 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
CHD8-210ENST00000555962 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
CHD8-210ENST00000555962 NESP48681 1621 aa16.22■□□□□ 0.19
CHD8-210ENST00000555962 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
CHD8-210ENST00000555962 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
CHD8-210ENST00000555962 CCDC88BA6NC98 1476 aa16.17■□□□□ 0.18
CHD8-210ENST00000555962 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
CHD8-210ENST00000555962 PPP4R3CPQ6ZMV5 832 aa16.13■□□□□ 0.17
CHD8-210ENST00000555962 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
CHD8-210ENST00000555962 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
CHD8-210ENST00000555962 PRDM2Q13029 1718 aa16.08■□□□□ 0.17
CHD8-210ENST00000555962 CFTRP13569 1480 aa16.07■□□□□ 0.16
CHD8-210ENST00000555962 ERCC6Q03468 1493 aa16.04■□□□□ 0.16
CHD8-210ENST00000555962 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
CHD8-210ENST00000555962 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
CHD8-210ENST00000555962 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
CHD8-210ENST00000555962 NCBP3Q53F19 620 aaKnown RBP15.93■□□□□ 0.14
CHD8-210ENST00000555962 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
CHD8-210ENST00000555962 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
CHD8-210ENST00000555962 MRC2Q9UBG0 1479 aa15.87■□□□□ 0.13
CHD8-210ENST00000555962 WDR62O43379 1518 aa15.84■□□□□ 0.13
CHD8-210ENST00000555962 CUX2O14529 1486 aa15.83■□□□□ 0.12
CHD8-210ENST00000555962 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
CHD8-210ENST00000555962 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
CHD8-210ENST00000555962 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
CHD8-210ENST00000555962 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
CHD8-210ENST00000555962 ABCC8Q09428 1581 aa15.69■□□□□ 0.1
CHD8-210ENST00000555962 NPM3O75607 178 aaKnown RBP15.68■□□□□ 0.1
CHD8-210ENST00000555962 CUX1P39880 1505 aa15.68■□□□□ 0.1
CHD8-210ENST00000555962 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CHD8-210ENST00000555962 SYNJ1O43426 1573 aa15.61■□□□□ 0.09
CHD8-210ENST00000555962 BIVM-ERCC5R4GMW8 1640 aa15.61■□□□□ 0.09
CHD8-210ENST00000555962 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
CHD8-210ENST00000555962 TARBP1Q13395 1621 aaKnown RBP15.59■□□□□ 0.09
CHD8-210ENST00000555962 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
CHD8-210ENST00000555962 WRNQ14191 1432 aaPredicted RBP eCLIP15.58■□□□□ 0.08
CHD8-210ENST00000555962 IFT140Q96RY7 1462 aa15.57■□□□□ 0.08
CHD8-210ENST00000555962 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
CHD8-210ENST00000555962 WDR97A6NE52 1622 aa15.53■□□□□ 0.08
CHD8-210ENST00000555962 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
CHD8-210ENST00000555962 SOGA1O94964 1423 aa15.51■□□□□ 0.07
CHD8-210ENST00000555962 CNKSR2Q8WXI2 1034 aa15.51■□□□□ 0.07
CHD8-210ENST00000555962 SCAF1Q9H7N4 1312 aaKnown RBP15.5■□□□□ 0.07
CHD8-210ENST00000555962 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
CHD8-210ENST00000555962 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.067e-7■■■■■ 28.5
CHD8-210ENST00000555962 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
CHD8-210ENST00000555962 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
CHD8-210ENST00000555962 ABCA5Q8WWZ7 1642 aa15.41■□□□□ 0.06
CHD8-210ENST00000555962 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
CHD8-210ENST00000555962 MSH5O43196 834 aa15.37■□□□□ 0.05
CHD8-210ENST00000555962 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
CHD8-210ENST00000555962 CHD1O14646 1710 aa15.32■□□□□ 0.04
CHD8-210ENST00000555962 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
CHD8-210ENST00000555962 SNAPC4Q5SXM2 1469 aa15.3■□□□□ 0.04
CHD8-210ENST00000555962 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
CHD8-210ENST00000555962 MAGI1Q96QZ7 1491 aaPredicted RBP15.27■□□□□ 0.03
CHD8-210ENST00000555962 ZBTB22O15209 634 aa15.26■□□□□ 0.03
CHD8-210ENST00000555962 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
CHD8-210ENST00000555962 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
CHD8-210ENST00000555962 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
CHD8-210ENST00000555962 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
CHD8-210ENST00000555962 SYNJ2O15056 1496 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms