RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SOX12O15370 315 aa21.82■■□□□ 1.08
PCNX1-209ENST00000554879 CANXP27824 592 aaKnown RBP21.82■■□□□ 1.08
PCNX1-209ENST00000554879 CFAP53Q96M91 514 aa21.82■■□□□ 1.08
PCNX1-209ENST00000554879 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
PCNX1-209ENST00000554879 YEATS2Q9ULM3 1422 aa21.81■■□□□ 1.08
PCNX1-209ENST00000554879 EVC2Q86UK5 1308 aa21.81■■□□□ 1.08
PCNX1-209ENST00000554879 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
PCNX1-209ENST00000554879 RALGAPBQ86X10 1494 aa21.8■■□□□ 1.08
PCNX1-209ENST00000554879 MSH5O43196 834 aa21.8■■□□□ 1.08
PCNX1-209ENST00000554879 PKNOX2Q96KN3 472 aa21.8■■□□□ 1.08
PCNX1-209ENST00000554879 SLC12A5Q9H2X9 1139 aa21.79■■□□□ 1.08
PCNX1-209ENST00000554879 NOP58Q9Y2X3 529 aaKnown RBP21.79■■□□□ 1.08
PCNX1-209ENST00000554879 MAST1Q9Y2H9 1570 aa21.79■■□□□ 1.08
PCNX1-209ENST00000554879 CROCC2H7BZ55 1655 aa21.79■■□□□ 1.08
PCNX1-209ENST00000554879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.78■■□□□ 1.081e-6■□□□□ 9.3
PCNX1-209ENST00000554879 PRAM1Q96QH2 718 aa21.78■■□□□ 1.08
PCNX1-209ENST00000554879 HDGFL2Q7Z4V5 671 aaPredicted RBP21.77■■□□□ 1.08
PCNX1-209ENST00000554879 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.08
PCNX1-209ENST00000554879 DISP3Q9P2K9 1392 aa21.77■■□□□ 1.08
PCNX1-209ENST00000554879 NEO1Q92859 1461 aa21.75■■□□□ 1.07
PCNX1-209ENST00000554879 ZFYVE16Q7Z3T8 1539 aa21.75■■□□□ 1.07
PCNX1-209ENST00000554879 RPGRIP1LQ68CZ1 1315 aa21.75■■□□□ 1.07
PCNX1-209ENST00000554879 PLA2R1Q13018 1463 aa21.75■■□□□ 1.07
PCNX1-209ENST00000554879 ZBTB7CA1YPR0 619 aa21.74■■□□□ 1.07
PCNX1-209ENST00000554879 TSPOAP1O95153 1857 aa21.74■■□□□ 1.07
PCNX1-209ENST00000554879 ERICH6BQ5W0A0 696 aa21.74■■□□□ 1.07
PCNX1-209ENST00000554879 TERF2IPQ9NYB0 399 aa21.73■■□□□ 1.07
PCNX1-209ENST00000554879 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
PCNX1-209ENST00000554879 TESK2Q96S53 571 aa21.71■■□□□ 1.07
PCNX1-209ENST00000554879 SLC26A8Q96RN1 970 aa21.7■■□□□ 1.06
PCNX1-209ENST00000554879 LAS1LQ9Y4W2 734 aaKnown RBP21.7■■□□□ 1.06
PCNX1-209ENST00000554879 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
PCNX1-209ENST00000554879 ABCA9Q8IUA7 1624 aa21.7■■□□□ 1.06
PCNX1-209ENST00000554879 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.69■■□□□ 1.06
PCNX1-209ENST00000554879 ATP10AO60312 1499 aa21.69■■□□□ 1.06
PCNX1-209ENST00000554879 C14orf93Q9H972 538 aaKnown RBP21.68■■□□□ 1.06
PCNX1-209ENST00000554879 U2AF1L5P0DN76 240 aaPredicted RBP21.68■■□□□ 1.06
PCNX1-209ENST00000554879 U2AF1Q01081 240 aaKnown RBP eCLIP21.68■■□□□ 1.06
PCNX1-209ENST00000554879 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
PCNX1-209ENST00000554879 UBE2Q2Q8WVN8 375 aa21.68■■□□□ 1.06
PCNX1-209ENST00000554879 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
PCNX1-209ENST00000554879 ARAP3Q8WWN8 1544 aa21.67■■□□□ 1.06
PCNX1-209ENST00000554879 NPATQ14207 1427 aa21.67■■□□□ 1.06
PCNX1-209ENST00000554879 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
PCNX1-209ENST00000554879 NUDCQ9Y266 331 aa21.67■■□□□ 1.06
PCNX1-209ENST00000554879 WAPLQ7Z5K2 1190 aa21.66■■□□□ 1.06
PCNX1-209ENST00000554879 SCAF11Q99590 1463 aaKnown RBP21.66■■□□□ 1.06
PCNX1-209ENST00000554879 CGNL1Q0VF96 1302 aa21.66■■□□□ 1.06
PCNX1-209ENST00000554879 GGNBP2Q9H3C7 697 aa21.66■■□□□ 1.06
PCNX1-209ENST00000554879 ZBED9Q6R2W3 1325 aa21.65■■□□□ 1.06
PCNX1-209ENST00000554879 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
PCNX1-209ENST00000554879 VSIG10Q8N0Z9 540 aa21.64■■□□□ 1.06
PCNX1-209ENST00000554879 KDM5DQ9BY66 1539 aa21.64■■□□□ 1.06
PCNX1-209ENST00000554879 PNISRQ8TF01 805 aaKnown RBP21.64■■□□□ 1.06
PCNX1-209ENST00000554879 SPATA31E1Q6ZUB1 1445 aa21.64■■□□□ 1.05
PCNX1-209ENST00000554879 PPP2R1AP30153 589 aa21.63■■□□□ 1.05
PCNX1-209ENST00000554879 B4GALNT3Q6L9W6 998 aa21.63■■□□□ 1.05
PCNX1-209ENST00000554879 PODXL2Q9NZ53 605 aa21.62■■□□□ 1.05
PCNX1-209ENST00000554879 MAPK8IP3Q9UPT6 1336 aa21.62■■□□□ 1.05
PCNX1-209ENST00000554879 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
PCNX1-209ENST00000554879 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
PCNX1-209ENST00000554879 RIMBP3CA6NJZ7 1639 aa21.61■■□□□ 1.05
PCNX1-209ENST00000554879 RIMBP3BA6NNM3 1639 aa21.61■■□□□ 1.05
PCNX1-209ENST00000554879 RIMBP3Q9UFD9 1639 aa21.61■■□□□ 1.05
PCNX1-209ENST00000554879 ARXQ96QS3 562 aa21.61■■□□□ 1.05
PCNX1-209ENST00000554879 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
PCNX1-209ENST00000554879 CDK19Q9BWU1 502 aa21.6■■□□□ 1.05
PCNX1-209ENST00000554879 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
PCNX1-209ENST00000554879 PAK3O75914 559 aaPredicted RBP21.59■■□□□ 1.05
PCNX1-209ENST00000554879 CABP1Q9NZU7 370 aa21.58■■□□□ 1.05
PCNX1-209ENST00000554879 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.04
PCNX1-209ENST00000554879 HECW2Q9P2P5 1572 aa21.58■■□□□ 1.04
PCNX1-209ENST00000554879 NGDNQ8NEJ9 315 aaKnown RBP21.57■■□□□ 1.04
PCNX1-209ENST00000554879 APAF1O14727 1248 aa21.57■■□□□ 1.04
PCNX1-209ENST00000554879 IQGAP3Q86VI3 1631 aa21.56■■□□□ 1.04
PCNX1-209ENST00000554879 UNC13BO14795 1591 aa21.55■■□□□ 1.04
PCNX1-209ENST00000554879 RCAN3Q9UKA8 241 aa21.54■■□□□ 1.04
PCNX1-209ENST00000554879 PRDM15P57071 1507 aaPredicted RBP21.54■■□□□ 1.04
PCNX1-209ENST00000554879 MTHFSP49914 203 aa21.54■■□□□ 1.04
PCNX1-209ENST00000554879 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.54■■□□□ 1.04
PCNX1-209ENST00000554879 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
PCNX1-209ENST00000554879 THEMISQ8N1K5 641 aaPredicted RBP21.53■■□□□ 1.04
PCNX1-209ENST00000554879 PTPRTO14522 1441 aa21.52■■□□□ 1.03
PCNX1-209ENST00000554879 PPP4R2Q9NY27 417 aa21.51■■□□□ 1.03
PCNX1-209ENST00000554879 FRAT1Q92837 279 aaPredicted RBP21.51■■□□□ 1.03
PCNX1-209ENST00000554879 CDCA7LQ96GN5 454 aa21.51■■□□□ 1.03
PCNX1-209ENST00000554879 GPRASP1Q5JY77 1395 aa21.5■■□□□ 1.03
PCNX1-209ENST00000554879 TNRQ92752 1358 aa21.5■■□□□ 1.03
PCNX1-209ENST00000554879 FANCIQ9NVI1 1328 aa21.5■■□□□ 1.03
PCNX1-209ENST00000554879 TRPM2O94759 1503 aa21.5■■□□□ 1.03
PCNX1-209ENST00000554879 A0A0U1RQG5 324 aaPredicted RBP21.49■■□□□ 1.03
PCNX1-209ENST00000554879 NSD3Q9BZ95 1437 aa21.49■■□□□ 1.03
PCNX1-209ENST00000554879 EIF2AK4Q9P2K8 1649 aaKnown RBP21.49■■□□□ 1.03
PCNX1-209ENST00000554879 GOLGA2Q08379 1002 aa21.49■■□□□ 1.03
PCNX1-209ENST00000554879 PER1O15534 1290 aaPredicted RBP21.48■■□□□ 1.03
PCNX1-209ENST00000554879 PMFBP1Q8TBY8 1022 aa21.47■■□□□ 1.03
PCNX1-209ENST00000554879 RBM33Q96EV2 1170 aaKnown RBP21.46■■□□□ 1.03
PCNX1-209ENST00000554879 PLIN1O60240 522 aa21.45■■□□□ 1.02
PCNX1-209ENST00000554879 COG3Q96JB2 828 aa21.45■■□□□ 1.02
PCNX1-209ENST00000554879 INO80Q9ULG1 1556 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms