RNA–Protein interactions for RNA: ENST00000550185.5

LINC02401-201, Transcript of long intergenic non-protein coding RNA 2401, humanhuman

TSL 1 (best) BASIC

Gene LINC02401, Length 3,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02401-201ENST00000550185 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
LINC02401-201ENST00000550185 SPATA31E1Q6ZUB1 1445 aa8.51□□□□□ -1.05
LINC02401-201ENST00000550185 XRN1Q8IZH2 1706 aaKnown RBP8.49□□□□□ -1.05
LINC02401-201ENST00000550185 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
LINC02401-201ENST00000550185 CHD2O14647 1828 aaKnown RBP8.49□□□□□ -1.05
LINC02401-201ENST00000550185 ANKRD30BQ9BXX2 1392 aa8.49□□□□□ -1.05
LINC02401-201ENST00000550185 TRIM26Q12899 539 aaPredicted RBP8.48□□□□□ -1.05
LINC02401-201ENST00000550185 NUP155O75694 1391 aa8.48□□□□□ -1.05
LINC02401-201ENST00000550185 SLC52A1Q9NWF4 448 aa8.48□□□□□ -1.05
LINC02401-201ENST00000550185 WASHC2CQ9Y4E1 1318 aa8.48□□□□□ -1.05
LINC02401-201ENST00000550185 LTBP4Q8N2S1 1624 aa8.47□□□□□ -1.05
LINC02401-201ENST00000550185 CHIC2Q9UKJ5 165 aa8.47□□□□□ -1.05
LINC02401-201ENST00000550185 STRCP1A6NGW2 1772 aa8.46□□□□□ -1.05
LINC02401-201ENST00000550185 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.05
LINC02401-201ENST00000550185 PELP1Q8IZL8 1130 aaKnown RBP8.46□□□□□ -1.05
LINC02401-201ENST00000550185 XIRP1Q702N8 1843 aaKnown RBP8.46□□□□□ -1.05
LINC02401-201ENST00000550185 ARID4BQ4LE39 1312 aaPredicted RBP8.46□□□□□ -1.06
LINC02401-201ENST00000550185 RPGRIP1LQ68CZ1 1315 aa8.45□□□□□ -1.06
LINC02401-201ENST00000550185 SCAF11Q99590 1463 aaKnown RBP8.45□□□□□ -1.06
LINC02401-201ENST00000550185 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
LINC02401-201ENST00000550185 TMEM2Q9UHN6 1383 aa8.44□□□□□ -1.06
LINC02401-201ENST00000550185 PKD2Q13563 968 aa8.44□□□□□ -1.06
LINC02401-201ENST00000550185 CPS1P31327 1500 aa8.44□□□□□ -1.06
LINC02401-201ENST00000550185 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
LINC02401-201ENST00000550185 GGT6Q6P531 493 aa8.43□□□□□ -1.06
LINC02401-201ENST00000550185 STAC3Q96MF2 364 aa8.43□□□□□ -1.06
LINC02401-201ENST00000550185 MPHOSPH9Q99550 1183 aa8.43□□□□□ -1.06
LINC02401-201ENST00000550185 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
LINC02401-201ENST00000550185 PIK3R4Q99570 1358 aa8.43□□□□□ -1.06
LINC02401-201ENST00000550185 DLC1Q96QB1 1528 aa8.42□□□□□ -1.06
LINC02401-201ENST00000550185 NCOA3Q9Y6Q9 1424 aa8.42□□□□□ -1.06
LINC02401-201ENST00000550185 TRPM1Q7Z4N2 1603 aa8.42□□□□□ -1.06
LINC02401-201ENST00000550185 CFAP65Q6ZU64 1925 aaKnown RBP8.41□□□□□ -1.06
LINC02401-201ENST00000550185 MYT1LQ9UL68 1186 aa8.41□□□□□ -1.06
LINC02401-201ENST00000550185 NKTRP30414 1462 aaKnown RBP8.41□□□□□ -1.06
LINC02401-201ENST00000550185 ALKQ9UM73 1620 aa8.41□□□□□ -1.06
LINC02401-201ENST00000550185 NPHP4O75161 1426 aaPredicted RBP8.4□□□□□ -1.06
LINC02401-201ENST00000550185 RIMS2Q9UQ26 1411 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 ADGRB2O60241 1585 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 ASXL1Q8IXJ9 1541 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 TECPR2O15040 1411 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 PIK3C2GO75747 1445 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 ADAMTS13Q76LX8 1427 aa8.4□□□□□ -1.06
LINC02401-201ENST00000550185 FBXO31Q5XUX0 539 aaPredicted RBP8.4□□□□□ -1.07
LINC02401-201ENST00000550185 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.07
LINC02401-201ENST00000550185 ADGRB1O14514 1584 aa8.39□□□□□ -1.07
LINC02401-201ENST00000550185 ERICH6Q7L0X2 663 aa8.38□□□□□ -1.07
LINC02401-201ENST00000550185 CEBPAP49715 358 aaPredicted RBP8.38□□□□□ -1.07
LINC02401-201ENST00000550185 IDI1Q13907 227 aa8.38□□□□□ -1.07
LINC02401-201ENST00000550185 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
LINC02401-201ENST00000550185 CCDC144AA2RUR9 1427 aa8.38□□□□□ -1.07
LINC02401-201ENST00000550185 NPM3O75607 178 aaKnown RBP8.38□□□□□ -1.07
LINC02401-201ENST00000550185 MLECQ14165 292 aa8.38□□□□□ -1.07
LINC02401-201ENST00000550185 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
LINC02401-201ENST00000550185 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC02401-201ENST00000550185 KDM2AQ9Y2K7 1162 aa8.37□□□□□ -1.07
LINC02401-201ENST00000550185 ARHGEF28Q8N1W1 1705 aaKnown RBP8.36□□□□□ -1.07
LINC02401-201ENST00000550185 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
LINC02401-201ENST00000550185 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
LINC02401-201ENST00000550185 DMRT2Q9Y5R5 561 aa8.35□□□□□ -1.07
LINC02401-201ENST00000550185 PCGF6Q9BYE7 350 aa8.35□□□□□ -1.07
LINC02401-201ENST00000550185 SIRT1Q96EB6 747 aa8.34□□□□□ -1.07
LINC02401-201ENST00000550185 FKBP8Q14318 412 aa8.33□□□□□ -1.08
LINC02401-201ENST00000550185 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC02401-201ENST00000550185 NALCNQ8IZF0 1738 aa8.33□□□□□ -1.08
LINC02401-201ENST00000550185 GPRASP1Q5JY77 1395 aa8.33□□□□□ -1.08
LINC02401-201ENST00000550185 TOPAZ1Q8N9V7 1692 aa8.33□□□□□ -1.08
LINC02401-201ENST00000550185 ITGAEP38570 1179 aa8.33□□□□□ -1.08
LINC02401-201ENST00000550185 HDGFP51858 240 aaKnown RBP8.33□□□□□ -1.08
LINC02401-201ENST00000550185 CDC42BPGQ6DT37 1551 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 FMN2Q9NZ56 1722 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 LRRC7Q96NW7 1537 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 DCCP43146 1447 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 FAM135BQ49AJ0 1406 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
LINC02401-201ENST00000550185 PTPRUQ92729 1446 aa8.31□□□□□ -1.08
LINC02401-201ENST00000550185 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
LINC02401-201ENST00000550185 LTKP29376 864 aa8.31□□□□□ -1.08
LINC02401-201ENST00000550185 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
LINC02401-201ENST00000550185 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.3□□□□□ -1.08
LINC02401-201ENST00000550185 MYT1Q01538 1121 aa8.29□□□□□ -1.08
LINC02401-201ENST00000550185 TRIM52Q96A61 297 aa8.29□□□□□ -1.08
LINC02401-201ENST00000550185 LRPPRCP42704 1394 aaKnown RBP8.29□□□□□ -1.08
LINC02401-201ENST00000550185 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
LINC02401-201ENST00000550185 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
LINC02401-201ENST00000550185 ABCC11Q96J66 1382 aa8.28□□□□□ -1.08
LINC02401-201ENST00000550185 ITSN1Q15811 1721 aa8.27□□□□□ -1.08
LINC02401-201ENST00000550185 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
LINC02401-201ENST00000550185 C14orf93Q9H972 538 aaKnown RBP8.27□□□□□ -1.09
LINC02401-201ENST00000550185 NCKAP5LQ9HCH0 1330 aa8.27□□□□□ -1.09
LINC02401-201ENST00000550185 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.09
LINC02401-201ENST00000550185 USP32Q8NFA0 1604 aa8.27□□□□□ -1.09
LINC02401-201ENST00000550185 EID1Q9Y6B2 187 aa8.26□□□□□ -1.09
LINC02401-201ENST00000550185 AHDC1Q5TGY3 1603 aaPredicted RBP8.26□□□□□ -1.09
LINC02401-201ENST00000550185 KCNA6P17658 529 aa8.26□□□□□ -1.09
LINC02401-201ENST00000550185 MST1RQ04912 1400 aa8.25□□□□□ -1.09
LINC02401-201ENST00000550185 COL22A1Q8NFW1 1626 aaPredicted RBP8.24□□□□□ -1.09
LINC02401-201ENST00000550185 YTHDC2Q9H6S0 1430 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms