RNA–Protein interactions for RNA: ENST00000550185.5

LINC02401-201, Transcript of long intergenic non-protein coding RNA 2401, humanhuman

TSL 1 (best) BASIC

Gene LINC02401, Length 3,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02401-201ENST00000550185 NISCHQ9Y2I1 1504 aa14.07□□□□□ -0.16
LINC02401-201ENST00000550185 CCDC180Q9P1Z9 1646 aa12.71□□□□□ -0.37
LINC02401-201ENST00000550185 MYO15BQ96JP2 1530 aa11.94□□□□□ -0.5
LINC02401-201ENST00000550185 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
LINC02401-201ENST00000550185 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
LINC02401-201ENST00000550185 NACADO15069 1562 aa11.79□□□□□ -0.52
LINC02401-201ENST00000550185 ABCC9O60706 1549 aa11.79□□□□□ -0.52
LINC02401-201ENST00000550185 RB1CC1Q8TDY2 1594 aa11.7□□□□□ -0.54
LINC02401-201ENST00000550185 UNC13AQ9UPW8 1703 aa11.55□□□□□ -0.56
LINC02401-201ENST00000550185 SHROOM4Q9ULL8 1493 aa11.49□□□□□ -0.57
LINC02401-201ENST00000550185 BICRAQ9NZM4 1560 aa11.4□□□□□ -0.58
LINC02401-201ENST00000550185 SCRIBQ14160 1630 aa11.22□□□□□ -0.61
LINC02401-201ENST00000550185 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
LINC02401-201ENST00000550185 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
LINC02401-201ENST00000550185 DCAF8L2P0C7V8 631 aa10.98□□□□□ -0.65
LINC02401-201ENST00000550185 SMARCA4P51532 1647 aa10.93□□□□□ -0.66
LINC02401-201ENST00000550185 BAZ1AQ9NRL2 1556 aaPredicted RBP10.91□□□□□ -0.66
LINC02401-201ENST00000550185 CC2D2AQ9P2K1 1620 aa10.9□□□□□ -0.67
LINC02401-201ENST00000550185 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
LINC02401-201ENST00000550185 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
LINC02401-201ENST00000550185 SMARCA2P51531 1590 aa10.85□□□□□ -0.67
LINC02401-201ENST00000550185 NCAPD3P42695 1498 aa10.81□□□□□ -0.68
LINC02401-201ENST00000550185 CECR2Q9BXF3 1484 aa10.78□□□□□ -0.68
LINC02401-201ENST00000550185 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
LINC02401-201ENST00000550185 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
LINC02401-201ENST00000550185 CHIC1Q5VXU3 224 aa10.69□□□□□ -0.7
LINC02401-201ENST00000550185 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
LINC02401-201ENST00000550185 TOP2AP11388 1531 aaKnown RBP10.67□□□□□ -0.7
LINC02401-201ENST00000550185 RSF1Q96T23 1441 aaPredicted RBP10.66□□□□□ -0.7
LINC02401-201ENST00000550185 WIZO95785 1651 aa10.66□□□□□ -0.7
LINC02401-201ENST00000550185 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
LINC02401-201ENST00000550185 BAZ1BQ9UIG0 1483 aaKnown RBP10.6□□□□□ -0.71
LINC02401-201ENST00000550185 LAMC3Q9Y6N6 1575 aa10.55□□□□□ -0.72
LINC02401-201ENST00000550185 SLC24A1O60721 1099 aa10.53□□□□□ -0.72
LINC02401-201ENST00000550185 CFTRP13569 1480 aa10.43□□□□□ -0.74
LINC02401-201ENST00000550185 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
LINC02401-201ENST00000550185 THOC2Q8NI27 1593 aaKnown RBP10.4□□□□□ -0.74
LINC02401-201ENST00000550185 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
LINC02401-201ENST00000550185 CADPSQ9ULU8 1353 aa10.37□□□□□ -0.75
LINC02401-201ENST00000550185 WDR62O43379 1518 aa10.33□□□□□ -0.76
LINC02401-201ENST00000550185 CUX2O14529 1486 aa10.31□□□□□ -0.76
LINC02401-201ENST00000550185 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
LINC02401-201ENST00000550185 NESP48681 1621 aa10.29□□□□□ -0.76
LINC02401-201ENST00000550185 WDR97A6NE52 1622 aa10.27□□□□□ -0.76
LINC02401-201ENST00000550185 MRC2Q9UBG0 1479 aa10.26□□□□□ -0.77
LINC02401-201ENST00000550185 ABCC8Q09428 1581 aa10.25□□□□□ -0.77
LINC02401-201ENST00000550185 BIVM-ERCC5R4GMW8 1640 aa10.24□□□□□ -0.77
LINC02401-201ENST00000550185 FANCD2Q9BXW9 1451 aa10.24□□□□□ -0.77
LINC02401-201ENST00000550185 DNMBPQ6XZF7 1577 aa10.23□□□□□ -0.77
LINC02401-201ENST00000550185 CEP164Q9UPV0 1460 aa10.23□□□□□ -0.77
LINC02401-201ENST00000550185 URB2Q14146 1524 aaKnown RBP10.19□□□□□ -0.78
LINC02401-201ENST00000550185 TOP2BQ02880 1626 aa10.15□□□□□ -0.78
LINC02401-201ENST00000550185 TARBP1Q13395 1621 aaKnown RBP10.15□□□□□ -0.78
LINC02401-201ENST00000550185 TOPBP1Q92547 1522 aa10.14□□□□□ -0.79
LINC02401-201ENST00000550185 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
LINC02401-201ENST00000550185 CUX1P39880 1505 aa10.12□□□□□ -0.79
LINC02401-201ENST00000550185 AEBP2Q6ZN18 517 aaPredicted RBP10.09□□□□□ -0.79
LINC02401-201ENST00000550185 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
LINC02401-201ENST00000550185 ABCA5Q8WWZ7 1642 aa10.06□□□□□ -0.8
LINC02401-201ENST00000550185 SYNJ1O43426 1573 aa10.06□□□□□ -0.8
LINC02401-201ENST00000550185 ABCA10Q8WWZ4 1543 aa10.03□□□□□ -0.8
LINC02401-201ENST00000550185 POLA1P09884 1462 aaPredicted RBP10.03□□□□□ -0.8
LINC02401-201ENST00000550185 PBRM1Q86U86 1689 aa10.01□□□□□ -0.81
LINC02401-201ENST00000550185 EIF4G3O43432 1585 aaKnown RBP10□□□□□ -0.81
LINC02401-201ENST00000550185 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
LINC02401-201ENST00000550185 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
LINC02401-201ENST00000550185 SUPT5HO00267 1087 aaKnown RBP9.97□□□□□ -0.81
LINC02401-201ENST00000550185 EHMT2Q96KQ7 1210 aa9.95□□□□□ -0.82
LINC02401-201ENST00000550185 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
LINC02401-201ENST00000550185 CUL7Q14999 1698 aa9.92□□□□□ -0.82
LINC02401-201ENST00000550185 MAGI1Q96QZ7 1491 aaPredicted RBP9.91□□□□□ -0.82
LINC02401-201ENST00000550185 SOGA1O94964 1423 aa9.91□□□□□ -0.82
LINC02401-201ENST00000550185 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
LINC02401-201ENST00000550185 ZNF608Q9ULD9 1512 aaPredicted RBP9.88□□□□□ -0.83
LINC02401-201ENST00000550185 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
LINC02401-201ENST00000550185 CHD1O14646 1710 aa9.87□□□□□ -0.83
LINC02401-201ENST00000550185 RAD54L2Q9Y4B4 1467 aa9.87□□□□□ -0.83
LINC02401-201ENST00000550185 CLASP1Q7Z460 1538 aa9.86□□□□□ -0.83
LINC02401-201ENST00000550185 GAPVD1Q14C86 1478 aa9.84□□□□□ -0.83
LINC02401-201ENST00000550185 SHROOM2Q13796 1616 aa9.84□□□□□ -0.83
LINC02401-201ENST00000550185 SYNJ2O15056 1496 aa9.82□□□□□ -0.84
LINC02401-201ENST00000550185 EEA1Q15075 1411 aa9.8□□□□□ -0.84
LINC02401-201ENST00000550185 SNAPC4Q5SXM2 1469 aa9.79□□□□□ -0.84
LINC02401-201ENST00000550185 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
LINC02401-201ENST00000550185 NUP160Q12769 1436 aa9.78□□□□□ -0.84
LINC02401-201ENST00000550185 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC02401-201ENST00000550185 POTEDQ86YR6 584 aa9.77□□□□□ -0.84
LINC02401-201ENST00000550185 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
LINC02401-201ENST00000550185 KIF21BO75037 1637 aa9.77□□□□□ -0.85
LINC02401-201ENST00000550185 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
LINC02401-201ENST00000550185 RUSC2Q8N2Y8 1516 aa9.76□□□□□ -0.85
LINC02401-201ENST00000550185 CEP170Q5SW79 1584 aa9.75□□□□□ -0.85
LINC02401-201ENST00000550185 GRIN2AQ12879 1464 aa9.75□□□□□ -0.85
LINC02401-201ENST00000550185 CTTNBP2Q8WZ74 1663 aa9.75□□□□□ -0.85
LINC02401-201ENST00000550185 PRXQ9BXM0 1461 aa9.74□□□□□ -0.85
LINC02401-201ENST00000550185 IGF1RP08069 1367 aa9.74□□□□□ -0.85
LINC02401-201ENST00000550185 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.85
LINC02401-201ENST00000550185 TDRD9Q8NDG6 1382 aaKnown RBP9.71□□□□□ -0.86
LINC02401-201ENST00000550185 UGGT2Q9NYU1 1516 aa9.67□□□□□ -0.86
LINC02401-201ENST00000550185 RAPGEF2Q9Y4G8 1499 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms