RNA–Protein interactions for RNA: ENST00000546388.1

CNPY2-202, Transcript of canopy FGF signaling regulator 2, humanhuman

TSL 1 (best)

Gene CNPY2, Length 670 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPY2-202ENST00000546388 TMEM2Q9UHN6 1383 aa24.16■■□□□ 1.46
CNPY2-202ENST00000546388 MED14O60244 1454 aa24.15■■□□□ 1.46
CNPY2-202ENST00000546388 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
CNPY2-202ENST00000546388 ZNF335Q9H4Z2 1342 aaPredicted RBP24.14■■□□□ 1.46
CNPY2-202ENST00000546388 ZFYVE9O95405 1425 aa24.14■■□□□ 1.45
CNPY2-202ENST00000546388 FOXD1Q16676 465 aa24.14■■□□□ 1.45
CNPY2-202ENST00000546388 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
CNPY2-202ENST00000546388 SPATA31E1Q6ZUB1 1445 aa24.1■■□□□ 1.45
CNPY2-202ENST00000546388 STAG3Q9UJ98 1225 aa24.1■■□□□ 1.45
CNPY2-202ENST00000546388 IQGAP1P46940 1657 aa24.1■■□□□ 1.45
CNPY2-202ENST00000546388 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
CNPY2-202ENST00000546388 PPLO60437 1756 aa24.08■■□□□ 1.45
CNPY2-202ENST00000546388 NEXMIFQ5QGS0 1516 aa24.08■■□□□ 1.45
CNPY2-202ENST00000546388 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
CNPY2-202ENST00000546388 RIMS2Q9UQ26 1411 aa24.07■■□□□ 1.44
CNPY2-202ENST00000546388 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
CNPY2-202ENST00000546388 CPS1P31327 1500 aa24.05■■□□□ 1.44
CNPY2-202ENST00000546388 LTKP29376 864 aa24.02■■□□□ 1.44
CNPY2-202ENST00000546388 EID1Q9Y6B2 187 aa24.02■■□□□ 1.44
CNPY2-202ENST00000546388 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
CNPY2-202ENST00000546388 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
CNPY2-202ENST00000546388 RPGRIP1LQ68CZ1 1315 aa24.01■■□□□ 1.43
CNPY2-202ENST00000546388 CHGAP10645 457 aaKnown RBP24■■□□□ 1.43
CNPY2-202ENST00000546388 TXNDC2Q86VQ3 553 aa24■■□□□ 1.43
CNPY2-202ENST00000546388 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
CNPY2-202ENST00000546388 UBAP1LF5GYI3 381 aa23.98■■□□□ 1.43
CNPY2-202ENST00000546388 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
CNPY2-202ENST00000546388 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
CNPY2-202ENST00000546388 NRXN3Q9Y4C0 1643 aa23.96■■□□□ 1.43
CNPY2-202ENST00000546388 MYOM2P54296 1465 aa23.93■■□□□ 1.42
CNPY2-202ENST00000546388 ZNF326Q5BKZ1 582 aaKnown RBP23.92■■□□□ 1.42
CNPY2-202ENST00000546388 SETD1AO15047 1707 aaKnown RBP23.91■■□□□ 1.42
CNPY2-202ENST00000546388 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
CNPY2-202ENST00000546388 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
CNPY2-202ENST00000546388 TOM1O60784 492 aa23.9■■□□□ 1.42
CNPY2-202ENST00000546388 ADAMTS13Q76LX8 1427 aa23.89■■□□□ 1.41
CNPY2-202ENST00000546388 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
CNPY2-202ENST00000546388 NEUROD1Q13562 356 aa23.88■■□□□ 1.41
CNPY2-202ENST00000546388 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
CNPY2-202ENST00000546388 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
CNPY2-202ENST00000546388 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
CNPY2-202ENST00000546388 NWD1Q149M9 1564 aa23.86■■□□□ 1.41
CNPY2-202ENST00000546388 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
CNPY2-202ENST00000546388 LAMC1P11047 1609 aa23.85■■□□□ 1.41
CNPY2-202ENST00000546388 PIK3R4Q99570 1358 aa23.84■■□□□ 1.41
CNPY2-202ENST00000546388 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
CNPY2-202ENST00000546388 PIK3C2GO75747 1445 aa23.84■■□□□ 1.41
CNPY2-202ENST00000546388 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
CNPY2-202ENST00000546388 ALKQ9UM73 1620 aa23.82■■□□□ 1.4
CNPY2-202ENST00000546388 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
CNPY2-202ENST00000546388 NUTM2DQ5VT03 806 aaPredicted RBP23.8■■□□□ 1.4
CNPY2-202ENST00000546388 LRRC7Q96NW7 1537 aa23.79■■□□□ 1.4
CNPY2-202ENST00000546388 XRN1Q8IZH2 1706 aaKnown RBP23.79■■□□□ 1.4
CNPY2-202ENST00000546388 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
CNPY2-202ENST00000546388 ADGRF5Q8IZF2 1346 aa23.78■■□□□ 1.4
CNPY2-202ENST00000546388 NKTRP30414 1462 aaKnown RBP23.77■■□□□ 1.4
CNPY2-202ENST00000546388 PIP4K2BP78356 416 aa23.77■■□□□ 1.4
CNPY2-202ENST00000546388 PRAG1Q86YV5 1406 aa23.76■■□□□ 1.39
CNPY2-202ENST00000546388 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
CNPY2-202ENST00000546388 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
CNPY2-202ENST00000546388 BCANQ96GW7 911 aa23.72■■□□□ 1.39
CNPY2-202ENST00000546388 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
CNPY2-202ENST00000546388 KNDC1Q76NI1 1749 aa23.72■■□□□ 1.39
CNPY2-202ENST00000546388 XIRP1Q702N8 1843 aaKnown RBP23.72■■□□□ 1.39
CNPY2-202ENST00000546388 KCNA6P17658 529 aa23.71■■□□□ 1.39
CNPY2-202ENST00000546388 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CNPY2-202ENST00000546388 METP08581 1390 aa23.7■■□□□ 1.38
CNPY2-202ENST00000546388 PTPRUQ92729 1446 aa23.69■■□□□ 1.38
CNPY2-202ENST00000546388 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
CNPY2-202ENST00000546388 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
CNPY2-202ENST00000546388 ADGRB1O14514 1584 aa23.68■■□□□ 1.38
CNPY2-202ENST00000546388 HSPA1LP34931 641 aa23.67■■□□□ 1.38
CNPY2-202ENST00000546388 TECPR2O15040 1411 aa23.66■■□□□ 1.38
CNPY2-202ENST00000546388 TRPM1Q7Z4N2 1603 aa23.65■■□□□ 1.38
CNPY2-202ENST00000546388 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
CNPY2-202ENST00000546388 TIMELESSQ9UNS1 1208 aa23.64■■□□□ 1.37
CNPY2-202ENST00000546388 NCOA3Q9Y6Q9 1424 aa23.63■■□□□ 1.37
CNPY2-202ENST00000546388 KDM2AQ9Y2K7 1162 aa23.62■■□□□ 1.37
CNPY2-202ENST00000546388 LRPPRCP42704 1394 aaKnown RBP23.62■■□□□ 1.37
CNPY2-202ENST00000546388 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
CNPY2-202ENST00000546388 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
CNPY2-202ENST00000546388 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
CNPY2-202ENST00000546388 ABCC11Q96J66 1382 aa23.6■■□□□ 1.37
CNPY2-202ENST00000546388 YTHDC2Q9H6S0 1430 aaKnown RBP23.59■■□□□ 1.37
CNPY2-202ENST00000546388 DLC1Q96QB1 1528 aa23.59■■□□□ 1.37
CNPY2-202ENST00000546388 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
CNPY2-202ENST00000546388 AMOTL2Q9Y2J4 779 aa23.59■■□□□ 1.37
CNPY2-202ENST00000546388 MED1Q15648 1581 aaPredicted RBP23.55■■□□□ 1.36
CNPY2-202ENST00000546388 MSH6P52701 1360 aa23.54■■□□□ 1.36
CNPY2-202ENST00000546388 ARHGEF28Q8N1W1 1705 aaKnown RBP23.54■■□□□ 1.36
CNPY2-202ENST00000546388 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
CNPY2-202ENST00000546388 SIRT1Q96EB6 747 aa23.54■■□□□ 1.36
CNPY2-202ENST00000546388 NALCNQ8IZF0 1738 aa23.53■■□□□ 1.36
CNPY2-202ENST00000546388 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
CNPY2-202ENST00000546388 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
CNPY2-202ENST00000546388 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
CNPY2-202ENST00000546388 TMEM132EQ6IEE7 984 aa23.51■■□□□ 1.35
CNPY2-202ENST00000546388 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
CNPY2-202ENST00000546388 DCCP43146 1447 aa23.5■■□□□ 1.35
CNPY2-202ENST00000546388 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms