RNA–Protein interactions for RNA: ENST00000546388.1

CNPY2-202, Transcript of canopy FGF signaling regulator 2, humanhuman

TSL 1 (best)

Gene CNPY2, Length 670 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNPY2-202ENST00000546388 NISCHQ9Y2I1 1504 aa39.58■■■■□ 3.93
CNPY2-202ENST00000546388 CCDC180Q9P1Z9 1646 aa35.21■■■■□ 3.23
CNPY2-202ENST00000546388 ABCC9O60706 1549 aa34.31■■■■□ 3.08
CNPY2-202ENST00000546388 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
CNPY2-202ENST00000546388 NACADO15069 1562 aa32.96■■■□□ 2.87
CNPY2-202ENST00000546388 MYO15BQ96JP2 1530 aa32.94■■■□□ 2.86
CNPY2-202ENST00000546388 DCAF1Q9Y4B6 1507 aa32.89■■■□□ 2.86
CNPY2-202ENST00000546388 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
CNPY2-202ENST00000546388 DCAF8L2P0C7V8 631 aa32.57■■■□□ 2.8
CNPY2-202ENST00000546388 DNAJC5BQ9UF47 199 aa32.44■■■□□ 2.78
CNPY2-202ENST00000546388 UNC13AQ9UPW8 1703 aa32.23■■■□□ 2.75
CNPY2-202ENST00000546388 PABPN1Q86U42 306 aaKnown RBP eCLIP31.96■■■□□ 2.71
CNPY2-202ENST00000546388 SCRIBQ14160 1630 aa31.93■■■□□ 2.7
CNPY2-202ENST00000546388 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
CNPY2-202ENST00000546388 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
CNPY2-202ENST00000546388 EIF4G1Q04637 1599 aaKnown RBP31.05■■■□□ 2.56
CNPY2-202ENST00000546388 CC2D2AQ9P2K1 1620 aa31.02■■■□□ 2.56
CNPY2-202ENST00000546388 CECR2Q9BXF3 1484 aa30.93■■■□□ 2.54
CNPY2-202ENST00000546388 BAZ1AQ9NRL2 1556 aaPredicted RBP30.67■■■□□ 2.5
CNPY2-202ENST00000546388 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
CNPY2-202ENST00000546388 DNAJC5Q9H3Z4 198 aa30.54■■■□□ 2.48
CNPY2-202ENST00000546388 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
CNPY2-202ENST00000546388 MROH2BQ7Z745 1585 aa30.45■■■□□ 2.47
CNPY2-202ENST00000546388 SMARCA2P51531 1590 aa30.42■■■□□ 2.46
CNPY2-202ENST00000546388 ATAD2BQ9ULI0 1458 aa30.38■■■□□ 2.45
CNPY2-202ENST00000546388 NCAPD3P42695 1498 aa30.36■■■□□ 2.45
CNPY2-202ENST00000546388 HMGXB3Q12766 1538 aa30.3■■■□□ 2.44
CNPY2-202ENST00000546388 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
CNPY2-202ENST00000546388 WIZO95785 1651 aa30.15■■■□□ 2.42
CNPY2-202ENST00000546388 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
CNPY2-202ENST00000546388 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
CNPY2-202ENST00000546388 ERCC6Q03468 1493 aa29.7■■■□□ 2.35
CNPY2-202ENST00000546388 CUX2O14529 1486 aa29.58■■■□□ 2.33
CNPY2-202ENST00000546388 LAMC3Q9Y6N6 1575 aa29.55■■■□□ 2.32
CNPY2-202ENST00000546388 NESP48681 1621 aa29.51■■■□□ 2.31
CNPY2-202ENST00000546388 CCDC88BA6NC98 1476 aa29.47■■■□□ 2.31
CNPY2-202ENST00000546388 CADPSQ9ULU8 1353 aa29.42■■■□□ 2.3
CNPY2-202ENST00000546388 SUPT5HO00267 1087 aaKnown RBP29.41■■■□□ 2.3
CNPY2-202ENST00000546388 CFTRP13569 1480 aa29.37■■■□□ 2.29
CNPY2-202ENST00000546388 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
CNPY2-202ENST00000546388 PDS5BQ9NTI5 1447 aa29.33■■■□□ 2.29
CNPY2-202ENST00000546388 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
CNPY2-202ENST00000546388 KIF21AQ7Z4S6 1674 aa29.21■■■□□ 2.27
CNPY2-202ENST00000546388 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
CNPY2-202ENST00000546388 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
CNPY2-202ENST00000546388 MRC2Q9UBG0 1479 aa29.02■■■□□ 2.24
CNPY2-202ENST00000546388 WDR62O43379 1518 aa28.92■■■□□ 2.22
CNPY2-202ENST00000546388 URB2Q14146 1524 aaKnown RBP28.79■■■□□ 2.2
CNPY2-202ENST00000546388 TRIM41Q8WV44 630 aa28.79■■■□□ 2.2
CNPY2-202ENST00000546388 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
CNPY2-202ENST00000546388 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
CNPY2-202ENST00000546388 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
CNPY2-202ENST00000546388 CUX1P39880 1505 aa28.58■■■□□ 2.17
CNPY2-202ENST00000546388 BIVM-ERCC5R4GMW8 1640 aa28.51■■■□□ 2.15
CNPY2-202ENST00000546388 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
CNPY2-202ENST00000546388 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
CNPY2-202ENST00000546388 POLA1P09884 1462 aaPredicted RBP28.45■■■□□ 2.14
CNPY2-202ENST00000546388 IFT140Q96RY7 1462 aa28.44■■■□□ 2.14
CNPY2-202ENST00000546388 SYNJ1O43426 1573 aa28.41■■■□□ 2.14
CNPY2-202ENST00000546388 TARBP1Q13395 1621 aaKnown RBP28.41■■■□□ 2.14
CNPY2-202ENST00000546388 FGD5Q6ZNL6 1462 aa28.4■■■□□ 2.14
CNPY2-202ENST00000546388 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
CNPY2-202ENST00000546388 SOGA1O94964 1423 aa28.27■■■□□ 2.12
CNPY2-202ENST00000546388 OSCARQ8IYS5 282 aa28.25■■■□□ 2.11
CNPY2-202ENST00000546388 RAD54L2Q9Y4B4 1467 aa28.24■■■□□ 2.11
CNPY2-202ENST00000546388 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
CNPY2-202ENST00000546388 ABCA10Q8WWZ4 1543 aa28.21■■■□□ 2.11
CNPY2-202ENST00000546388 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
CNPY2-202ENST00000546388 ABCA5Q8WWZ7 1642 aa28.11■■■□□ 2.09
CNPY2-202ENST00000546388 AQRO60306 1485 aaKnown RBP eCLIP28.06■■■□□ 2.08
CNPY2-202ENST00000546388 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
CNPY2-202ENST00000546388 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
CNPY2-202ENST00000546388 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
CNPY2-202ENST00000546388 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
CNPY2-202ENST00000546388 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
CNPY2-202ENST00000546388 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
CNPY2-202ENST00000546388 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
CNPY2-202ENST00000546388 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
CNPY2-202ENST00000546388 KIF27Q86VH2 1401 aa27.84■■■□□ 2.05
CNPY2-202ENST00000546388 CHD1O14646 1710 aa27.82■■■□□ 2.04
CNPY2-202ENST00000546388 FBLN2P98095 1184 aa27.81■■■□□ 2.04
CNPY2-202ENST00000546388 ADAMTS12P58397 1594 aa27.8■■■□□ 2.04
CNPY2-202ENST00000546388 RIMBP3CA6NJZ7 1639 aa27.78■■■□□ 2.04
CNPY2-202ENST00000546388 RIMBP3BA6NNM3 1639 aa27.78■■■□□ 2.04
CNPY2-202ENST00000546388 RIMBP3Q9UFD9 1639 aa27.78■■■□□ 2.04
CNPY2-202ENST00000546388 SYNJ2O15056 1496 aa27.76■■■□□ 2.04
CNPY2-202ENST00000546388 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
CNPY2-202ENST00000546388 CUL7Q14999 1698 aa27.73■■■□□ 2.03
CNPY2-202ENST00000546388 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.03
CNPY2-202ENST00000546388 CHMP7Q8WUX9 453 aaPredicted RBP27.69■■■□□ 2.02
CNPY2-202ENST00000546388 IGF1RP08069 1367 aa27.68■■■□□ 2.02
CNPY2-202ENST00000546388 GRIN2AQ12879 1464 aa27.62■■■□□ 2.01
CNPY2-202ENST00000546388 RUSC2Q8N2Y8 1516 aa27.62■■■□□ 2.01
CNPY2-202ENST00000546388 EEA1Q15075 1411 aa27.58■■■□□ 2.01
CNPY2-202ENST00000546388 CLASP1Q7Z460 1538 aa27.54■■■□□ 2
CNPY2-202ENST00000546388 NUP160Q12769 1436 aa27.52■■■□□ 2
CNPY2-202ENST00000546388 CYB5RLQ6IPT4 315 aa27.51■■□□□ 1.99
CNPY2-202ENST00000546388 CARMIL1Q5VZK9 1371 aa27.5■■□□□ 1.99
CNPY2-202ENST00000546388 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
CNPY2-202ENST00000546388 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms