RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 TRAK1Q9UPV9 953 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 SOX12O15370 315 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 BCAR3O75815 825 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
PKD1-222ENST00000496574 SKAP1Q86WV1 359 aa17.39■□□□□ 0.38
PKD1-222ENST00000496574 STK31Q9BXU1 1019 aa17.39■□□□□ 0.38
PKD1-222ENST00000496574 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
PKD1-222ENST00000496574 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
PKD1-222ENST00000496574 RBM10P98175 930 aaKnown RBP17.38■□□□□ 0.37
PKD1-222ENST00000496574 GGT6Q6P531 493 aa17.38■□□□□ 0.37
PKD1-222ENST00000496574 CCDC39Q9UFE4 941 aa17.38■□□□□ 0.37
PKD1-222ENST00000496574 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
PKD1-222ENST00000496574 CAVIN1Q6NZI2 390 aaKnown RBP17.37■□□□□ 0.37
PKD1-222ENST00000496574 KIF3BO15066 747 aa17.37■□□□□ 0.37
PKD1-222ENST00000496574 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
PKD1-222ENST00000496574 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
PKD1-222ENST00000496574 CFTRP13569 1480 aa17.36■□□□□ 0.37
PKD1-222ENST00000496574 RNF214Q8ND24 703 aa17.36■□□□□ 0.37
PKD1-222ENST00000496574 TPM4P67936 248 aa17.35■□□□□ 0.37
PKD1-222ENST00000496574 RILPL2Q969X0 211 aa17.35■□□□□ 0.37
PKD1-222ENST00000496574 ANKRD50Q9ULJ7 1429 aa17.35■□□□□ 0.37
PKD1-222ENST00000496574 NAIPQ13075 1403 aa17.35■□□□□ 0.37
PKD1-222ENST00000496574 INTS3Q68E01 1043 aaKnown RBP17.34■□□□□ 0.37
PKD1-222ENST00000496574 TCP11L2Q8N4U5 519 aa17.33■□□□□ 0.36
PKD1-222ENST00000496574 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
PKD1-222ENST00000496574 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
PKD1-222ENST00000496574 CDC45O75419 566 aa17.32■□□□□ 0.36
PKD1-222ENST00000496574 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
PKD1-222ENST00000496574 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
PKD1-222ENST00000496574 RIPK4P57078 832 aa17.31■□□□□ 0.36
PKD1-222ENST00000496574 C20orf194Q5TEA3 1177 aa17.31■□□□□ 0.36
PKD1-222ENST00000496574 ZNF592Q92610 1267 aa17.31■□□□□ 0.36
PKD1-222ENST00000496574 MBD3O95983 291 aa17.31■□□□□ 0.36
PKD1-222ENST00000496574 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
PKD1-222ENST00000496574 CIZ1Q9ULV3 898 aaPredicted RBP17.3■□□□□ 0.36
PKD1-222ENST00000496574 NCOA1Q15788 1441 aa17.3■□□□□ 0.36
PKD1-222ENST00000496574 NBPF1Q3BBV0 1214 aa17.3■□□□□ 0.36
PKD1-222ENST00000496574 GPATCH3Q96I76 525 aa17.29■□□□□ 0.36
PKD1-222ENST00000496574 BECN2A8MW95 431 aa17.29■□□□□ 0.36
PKD1-222ENST00000496574 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
PKD1-222ENST00000496574 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
PKD1-222ENST00000496574 A0A0U1RQG5 324 aaPredicted RBP17.29■□□□□ 0.36
PKD1-222ENST00000496574 PRPF40AO75400 957 aaKnown RBP17.28■□□□□ 0.36
PKD1-222ENST00000496574 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
PKD1-222ENST00000496574 ZSCAN30Q86W11 494 aa17.28■□□□□ 0.36
PKD1-222ENST00000496574 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
PKD1-222ENST00000496574 JPH4Q96JJ6 628 aa17.27■□□□□ 0.35
PKD1-222ENST00000496574 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
PKD1-222ENST00000496574 RABEP1Q15276 862 aa17.26■□□□□ 0.35
PKD1-222ENST00000496574 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
PKD1-222ENST00000496574 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
PKD1-222ENST00000496574 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
PKD1-222ENST00000496574 CHMP4AQ9BY43 222 aa17.25■□□□□ 0.35
PKD1-222ENST00000496574 SLFN5Q08AF3 891 aa17.25■□□□□ 0.35
PKD1-222ENST00000496574 DIAPH1O60610 1272 aaKnown RBP17.25■□□□□ 0.35
PKD1-222ENST00000496574 GOLGA6L1Q8N7Z2 621 aa17.25■□□□□ 0.35
PKD1-222ENST00000496574 K7ELQ4 463 aaPredicted RBP17.24■□□□□ 0.35
PKD1-222ENST00000496574 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 UQCRHLA0A096LP55 91 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 UQCRHP07919 91 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 IFT57Q9NWB7 429 aa17.24■□□□□ 0.35
PKD1-222ENST00000496574 TOP2BQ02880 1626 aa17.23■□□□□ 0.35
PKD1-222ENST00000496574 MTHFSP49914 203 aa17.23■□□□□ 0.35
PKD1-222ENST00000496574 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
PKD1-222ENST00000496574 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
PKD1-222ENST00000496574 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
PKD1-222ENST00000496574 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
PKD1-222ENST00000496574 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
PKD1-222ENST00000496574 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
PKD1-222ENST00000496574 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
PKD1-222ENST00000496574 H3BQV1 296 aa17.21■□□□□ 0.35
PKD1-222ENST00000496574 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
PKD1-222ENST00000496574 IFFO2Q5TF58 517 aa17.21■□□□□ 0.35
PKD1-222ENST00000496574 SMC3Q9UQE7 1217 aa17.21■□□□□ 0.35
PKD1-222ENST00000496574 ROCK1Q13464 1354 aa17.21■□□□□ 0.35
PKD1-222ENST00000496574 PDCL3Q9H2J4 239 aa17.21■□□□□ 0.35
PKD1-222ENST00000496574 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
PKD1-222ENST00000496574 TPM3P06753 285 aa17.2■□□□□ 0.34
PKD1-222ENST00000496574 ZMYND15Q9H091 742 aa17.2■□□□□ 0.34
PKD1-222ENST00000496574 VPS37CA5D8V6 355 aaPredicted RBP17.2■□□□□ 0.34
PKD1-222ENST00000496574 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
PKD1-222ENST00000496574 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 ANKRD30BQ9BXX2 1392 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 PODXL2Q9NZ53 605 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 NEK4P51957 841 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 GNAI1P63096 354 aa17.19■□□□□ 0.34
PKD1-222ENST00000496574 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 ZKSCAN1P17029 563 aaPredicted RBP17.18■□□□□ 0.34
PKD1-222ENST00000496574 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 FAM184AQ8NB25 1140 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 MAP3K1Q13233 1512 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 CLCN1P35523 988 aa17.18■□□□□ 0.34
PKD1-222ENST00000496574 RUFY2Q8WXA3 655 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms